Gene annotation
Transcriptome id Sobic.008G150300.1
Synonym Sb08g020010
Functional annotation Lg106, putative, expressed
UniProt C5YQY4
Pfam PF04667
Panther DB PTHR10358 PTHR10358:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64130 : cAMP-regulated phosphoprotein 19-related protein
RAP-DB (Rice) LOC_Os01g47490.3 : Lg106, putative, expressed
MaizeGDB (Corn) Zm00025a004512 , Zm00025a004506 , Zm00025a004508
Brachypodium KQK03558
Barley HORVU1Hr1G088780.1
Wheat TraesCS1D02G410900 , TraesCS1A02G402900 , TraesCS1A02G402900 , TraesCS1B02G432300
Populus -


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cDNA sequences
Sobic.008G150300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G170300 LYR motif containing protein, putative, expressed K03950: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
2 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
3 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
4 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
5 Sobic.007G161200 expressed protein -
6 Sobic.002G410700 vacuolar ATP synthase subunit F, putative, expressed K02151: ATPeV1F, V-type H+-transporting ATPase subunit F
7 Sobic.005G105500 expressed protein -
8 Sobic.007G159700 expressed protein K02138: ATPeF0D, ATP5H, F-type H+-transporting ATPase subunit d
9 Sobic.006G211800 coatomer subunit epsilon, putative, expressed K17268: coatomer subunit epsilon
10 Sobic.006G058900 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
11 Sobic.004G344800 NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed K03953: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
12 Sobic.004G347600 vacuolar ATP synthase subunit H, putative, expressed K02144: V-type H+-transporting ATPase subunit H
13 Sobic.004G282700 synthase, putative, expressed K12451: 3,5-epimerase/4-reductase
14 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
15 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
16 Sobic.010G258000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
17 Sobic.001G145500 trafficking protein particle complex subunit 1, putative, expressed -
18 Sobic.003G428200 MEMO1, putative, expressed K06990: MEMO1 family protein
19 Sobic.003G169900 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
20 Sobic.003G330500 peptidase, T1 family, putative, expressed -


Gene co-expression network
sample Sobic008G150300 Sobic008G150300 Sobic003G170300 Sobic003G170300 Sobic008G150300--Sobic003G170300 Sobic001G281900 Sobic001G281900 Sobic008G150300--Sobic001G281900 Sobic001G338400 Sobic001G338400 Sobic008G150300--Sobic001G338400 Sobic001G458800 Sobic001G458800 Sobic008G150300--Sobic001G458800 Sobic007G161200 Sobic007G161200 Sobic008G150300--Sobic007G161200 Sobic002G410700 Sobic002G410700 Sobic008G150300--Sobic002G410700 Sobic005G105500 Sobic005G105500 Sobic008G150300--Sobic005G105500 Sobic007G159700 Sobic007G159700 Sobic008G150300--Sobic007G159700 Sobic006G211800 Sobic006G211800 Sobic008G150300--Sobic006G211800 Sobic009G240700 Sobic009G240700 Sobic003G170300--Sobic009G240700 Sobic003G170300--Sobic008G150300 Sobic001G473400 Sobic001G473400 Sobic003G170300--Sobic001G473400 Sobic004G155100 Sobic004G155100 Sobic003G170300--Sobic004G155100 Sobic004G282700 Sobic004G282700 Sobic003G170300--Sobic004G282700 Sobic002G180300 Sobic002G180300 Sobic003G170300--Sobic002G180300 Sobic002G308300 Sobic002G308300 Sobic003G170300--Sobic002G308300 Sobic001G282500 Sobic001G282500 Sobic003G170300--Sobic001G282500 Sobic010G264300 Sobic010G264300 Sobic003G170300--Sobic010G264300 Sobic003G330500 Sobic003G330500 Sobic001G281900--Sobic003G330500 Sobic001G281900--Sobic005G105500 Sobic001G281900--Sobic008G150300 Sobic006G252200 Sobic006G252200 Sobic001G281900--Sobic006G252200 Sobic001G196100 Sobic001G196100 Sobic001G281900--Sobic001G196100 Sobic001G458700 Sobic001G458700 Sobic001G281900--Sobic001G458700 Sobic007G176200 Sobic007G176200 Sobic001G281900--Sobic007G176200 Sobic001G281900--Sobic001G338400 Sobic001G096100 Sobic001G096100 Sobic001G281900--Sobic001G096100 Sobic003G348800 Sobic003G348800 Sobic001G338400--Sobic003G348800 Sobic001G338400--Sobic008G150300 Sobic001G338400--Sobic001G281900 Sobic001G145500 Sobic001G145500 Sobic001G338400--Sobic001G145500 Sobic004G010900 Sobic004G010900 Sobic001G338400--Sobic004G010900 Sobic001G490500 Sobic001G490500 Sobic001G338400--Sobic001G490500 Sobic001G230100 Sobic001G230100 Sobic001G338400--Sobic001G230100 Sobic002G342500 Sobic002G342500 Sobic001G338400--Sobic002G342500 Sobic006G029000 Sobic006G029000 Sobic001G338400--Sobic006G029000 Sobic003G034900 Sobic003G034900 Sobic001G458800--Sobic003G034900 Sobic009G224400 Sobic009G224400 Sobic001G458800--Sobic009G224400 Sobic006G058900 Sobic006G058900 Sobic001G458800--Sobic006G058900 Sobic001G115700 Sobic001G115700 Sobic001G458800--Sobic001G115700 Sobic007G171500 Sobic007G171500 Sobic001G458800--Sobic007G171500 Sobic001G073600 Sobic001G073600 Sobic001G458800--Sobic001G073600 Sobic002G186300 Sobic002G186300 Sobic001G458800--Sobic002G186300 Sobic002G395000 Sobic002G395000 Sobic001G458800--Sobic002G395000 Sobic001G031900 Sobic001G031900 Sobic001G458800--Sobic001G031900 Sobic004G060100 Sobic004G060100 Sobic007G161200--Sobic004G060100 Sobic003G200800 Sobic003G200800 Sobic007G161200--Sobic003G200800 Sobic005G018800 Sobic005G018800 Sobic007G161200--Sobic005G018800 Sobic009G256000 Sobic009G256000 Sobic007G161200--Sobic009G256000 Sobic004G347600 Sobic004G347600 Sobic007G161200--Sobic004G347600 Sobic008G021200 Sobic008G021200 Sobic007G161200--Sobic008G021200 Sobic007G161200--Sobic001G115700 Sobic007G161200--Sobic008G150300 Sobic004G283600 Sobic004G283600 Sobic007G161200--Sobic004G283600 Sobic003G216500 Sobic003G216500 Sobic002G410700--Sobic003G216500 Sobic006G237200 Sobic006G237200 Sobic002G410700--Sobic006G237200 Sobic002G410700--Sobic009G256000 Sobic002G410700--Sobic008G150300 Sobic002G410700--Sobic001G473400 Sobic006G020900 Sobic006G020900 Sobic002G410700--Sobic006G020900 Sobic002G410700--Sobic009G240700 Sobic002G410700--Sobic007G161200 Sobic002G410700--Sobic003G170300 Sobic005G105500--Sobic001G281900 Sobic005G105500--Sobic001G458700 Sobic002G341800 Sobic002G341800 Sobic005G105500--Sobic002G341800 Sobic005G105500--Sobic001G145500 Sobic005G105500--Sobic001G096100 Sobic005G105500--Sobic006G211800 Sobic005G105500--Sobic007G176200 Sobic005G105500--Sobic003G330500 Sobic006G002201 Sobic006G002201 Sobic005G105500--Sobic006G002201 Sobic007G159700--Sobic001G073600 Sobic007G159700--Sobic001G282500 Sobic007G159700--Sobic004G155100 Sobic007G159700--Sobic002G395000 Sobic003G135600 Sobic003G135600 Sobic007G159700--Sobic003G135600 Sobic009G191400 Sobic009G191400 Sobic007G159700--Sobic009G191400 Sobic002G309500 Sobic002G309500 Sobic007G159700--Sobic002G309500 Sobic007G159700--Sobic001G458800 Sobic007G159700--Sobic009G224400 Sobic002G428200 Sobic002G428200 Sobic006G211800--Sobic002G428200 Sobic006G211800--Sobic007G176200 Sobic002G423800 Sobic002G423800 Sobic006G211800--Sobic002G423800 Sobic006G211800--Sobic006G252200 Sobic006G211800--Sobic005G105500 Sobic009G234400 Sobic009G234400 Sobic006G211800--Sobic009G234400 Sobic001G444300 Sobic001G444300 Sobic006G211800--Sobic001G444300 Sobic001G404100 Sobic001G404100 Sobic006G211800--Sobic001G404100 Sobic009G212300 Sobic009G212300 Sobic006G211800--Sobic009G212300
Octagon: transcription factors


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