Gene annotation
Transcriptome id Sobic.004G282700.1
Synonym NRS/ER, UER1, Sb04g031900
Functional annotation synthase, putative, expressed
UniProt C5Y0Z4
Pfam PF04321
Panther DB PTHR10366 PTHR10366:SF405
NCBI CDD -
KEGG Orthology K12451; 3,5-epimerase/4-reductase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G63000 : nucleotide-rhamnose synthase/epimerase-reductase
RAP-DB (Rice) LOC_Os02g45540.1 : synthase, putative, expressed
MaizeGDB (Corn) Zm00025a021508
Brachypodium KQK00766
Barley HORVU6Hr1G065690.1 , HORVU6Hr1G065690.2
Wheat TraesCS6B02G267600 , TraesCS6D02G238800 , TraesCS6A02G257500
Populus -


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cDNA sequences
Sobic.004G282700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G170300 LYR motif containing protein, putative, expressed K03950: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
2 Sobic.010G264300 LYR motif containing protein, putative, expressed K03965: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
3 Sobic.002G180300 isochorismate synthase 1, chloroplast precursor, putative, expressed K15040: voltage-dependent anion channel protein 2
4 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
5 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
6 Sobic.001G304400 expressed protein -
7 Sobic.006G038200 receptor protein kinase, putative, expressed -
8 Sobic.005G194900 phosphoserine phosphatase, chloroplast precursor, putative, expressed K01079: serB, phosphoserine phosphatase
9 Sobic.008G132400 expressed protein -
10 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
11 Sobic.001G040100 methylenetetrahydrofolate reductase, putative, expressed K00297: metF, methylenetetrahydrofolate reductase (NADPH)
12 Sobic.003G443300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
13 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
14 Sobic.004G138800 prefoldin subunit, putative, expressed K09548: prefoldin subunit 1
15 Sobic.008G150300 Lg106, putative, expressed -
16 Sobic.007G092100 ADP-ribosylation factor, putative, expressed K07942: ADP-ribosylation factor-like protein 1
17 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
18 Sobic.003G322300 expressed protein -
19 Sobic.003G410500 transaldolase, putative, expressed K00616: E2.2.1.2, talA, transaldolase
20 Sobic.006G035900 ribosomal protein, putative, expressed K02995: RP-S8e, small subunit ribosomal protein S8e


Gene co-expression network
sample Sobic004G282700 Sobic004G282700 Sobic003G170300 Sobic003G170300 Sobic004G282700--Sobic003G170300 Sobic010G264300 Sobic010G264300 Sobic004G282700--Sobic010G264300 Sobic002G180300 Sobic002G180300 Sobic004G282700--Sobic002G180300 Sobic001G096100 Sobic001G096100 Sobic004G282700--Sobic001G096100 Sobic002G356400 Sobic002G356400 Sobic004G282700--Sobic002G356400 Sobic001G304400 Sobic001G304400 Sobic004G282700--Sobic001G304400 Sobic006G038200 Sobic006G038200 Sobic004G282700--Sobic006G038200 Sobic005G194900 Sobic005G194900 Sobic004G282700--Sobic005G194900 Sobic008G132400 Sobic008G132400 Sobic004G282700--Sobic008G132400 Sobic009G240700 Sobic009G240700 Sobic003G170300--Sobic009G240700 Sobic008G150300 Sobic008G150300 Sobic003G170300--Sobic008G150300 Sobic001G473400 Sobic001G473400 Sobic003G170300--Sobic001G473400 Sobic004G155100 Sobic004G155100 Sobic003G170300--Sobic004G155100 Sobic003G170300--Sobic004G282700 Sobic003G170300--Sobic002G180300 Sobic002G308300 Sobic002G308300 Sobic003G170300--Sobic002G308300 Sobic001G282500 Sobic001G282500 Sobic003G170300--Sobic001G282500 Sobic003G170300--Sobic010G264300 Sobic001G286200 Sobic001G286200 Sobic010G264300--Sobic001G286200 Sobic002G078300 Sobic002G078300 Sobic010G264300--Sobic002G078300 Sobic010G264300--Sobic002G308300 Sobic001G519000 Sobic001G519000 Sobic010G264300--Sobic001G519000 Sobic010G264300--Sobic002G356400 Sobic009G212200 Sobic009G212200 Sobic010G264300--Sobic009G212200 Sobic001G370700 Sobic001G370700 Sobic010G264300--Sobic001G370700 Sobic010G264300--Sobic001G304400 Sobic010G264300--Sobic002G180300 Sobic002G309700 Sobic002G309700 Sobic002G180300--Sobic002G309700 Sobic006G013000 Sobic006G013000 Sobic002G180300--Sobic006G013000 Sobic002G180300--Sobic002G356400 Sobic009G179100 Sobic009G179100 Sobic002G180300--Sobic009G179100 Sobic009G115700 Sobic009G115700 Sobic002G180300--Sobic009G115700 Sobic002G180300--Sobic010G264300 Sobic001G404800 Sobic001G404800 Sobic002G180300--Sobic001G404800 Sobic002G180300--Sobic001G370700 Sobic002G180300--Sobic002G308300 Sobic004G066800 Sobic004G066800 Sobic001G096100--Sobic004G066800 Sobic004G138800 Sobic004G138800 Sobic001G096100--Sobic004G138800 Sobic003G330500 Sobic003G330500 Sobic001G096100--Sobic003G330500 Sobic006G252200 Sobic006G252200 Sobic001G096100--Sobic006G252200 Sobic004G224900 Sobic004G224900 Sobic001G096100--Sobic004G224900 Sobic002G255100 Sobic002G255100 Sobic001G096100--Sobic002G255100 Sobic001G481700 Sobic001G481700 Sobic001G096100--Sobic001G481700 Sobic003G196800 Sobic003G196800 Sobic001G096100--Sobic003G196800 Sobic010G038700 Sobic010G038700 Sobic001G096100--Sobic010G038700 Sobic002G356400--Sobic002G309700 Sobic001G465800 Sobic001G465800 Sobic002G356400--Sobic001G465800 Sobic009G119900 Sobic009G119900 Sobic002G356400--Sobic009G119900 Sobic001G350600 Sobic001G350600 Sobic002G356400--Sobic001G350600 Sobic004G170400 Sobic004G170400 Sobic002G356400--Sobic004G170400 Sobic004G260200 Sobic004G260200 Sobic002G356400--Sobic004G260200 Sobic002G356400--Sobic001G404800 Sobic004G259200 Sobic004G259200 Sobic002G356400--Sobic004G259200 Sobic003G209000 Sobic003G209000 Sobic002G356400--Sobic003G209000 Sobic003G443300 Sobic003G443300 Sobic001G304400--Sobic003G443300 Sobic001G432000 Sobic001G432000 Sobic001G304400--Sobic001G432000 Sobic001G304400--Sobic001G286200 Sobic003G249700 Sobic003G249700 Sobic001G304400--Sobic003G249700 Sobic001G304400--Sobic009G212200 Sobic007G019400 Sobic007G019400 Sobic001G304400--Sobic007G019400 Sobic002G304900 Sobic002G304900 Sobic001G304400--Sobic002G304900 Sobic003G150000 Sobic003G150000 Sobic001G304400--Sobic003G150000 Sobic009G062000 Sobic009G062000 Sobic001G304400--Sobic009G062000 Sobic006G038200--Sobic003G170300 Sobic006G038200--Sobic004G282700 Sobic002G338400 Sobic002G338400 Sobic006G038200--Sobic002G338400 Sobic006G038200--Sobic010G264300 Sobic008G178800 Sobic008G178800 Sobic006G038200--Sobic008G178800 Sobic009G017500 Sobic009G017500 Sobic006G038200--Sobic009G017500 Sobic003G216500 Sobic003G216500 Sobic006G038200--Sobic003G216500 Sobic001G035600 Sobic001G035600 Sobic006G038200--Sobic001G035600 Sobic006G075000 Sobic006G075000 Sobic006G038200--Sobic006G075000 Sobic005G194900--Sobic004G282700 Sobic002G431100 Sobic002G431100 Sobic005G194900--Sobic002G431100 Sobic009G236100 Sobic009G236100 Sobic005G194900--Sobic009G236100 Sobic007G147800 Sobic007G147800 Sobic005G194900--Sobic007G147800 Sobic003G428300 Sobic003G428300 Sobic005G194900--Sobic003G428300 Sobic010G187500 Sobic010G187500 Sobic005G194900--Sobic010G187500 Sobic004G213200 Sobic004G213200 Sobic005G194900--Sobic004G213200 Sobic004G162000 Sobic004G162000 Sobic005G194900--Sobic004G162000 Sobic007G047300 Sobic007G047300 Sobic005G194900--Sobic007G047300 Sobic008G132400--Sobic004G138800 Sobic006G216600 Sobic006G216600 Sobic008G132400--Sobic006G216600 Sobic004G216800 Sobic004G216800 Sobic008G132400--Sobic004G216800 Sobic006G035900 Sobic006G035900 Sobic008G132400--Sobic006G035900 Sobic003G363800 Sobic003G363800 Sobic008G132400--Sobic003G363800 Sobic001G040100 Sobic001G040100 Sobic008G132400--Sobic001G040100 Sobic001G057300 Sobic001G057300 Sobic008G132400--Sobic001G057300 Sobic001G085400 Sobic001G085400 Sobic008G132400--Sobic001G085400 Sobic008G132400--Sobic001G304400
Octagon: transcription factors


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