Gene annotation
Transcriptome id Sobic.002G301200.1
Synonym Sb02g033170, SCPL49, CPY
Functional annotation OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed
UniProt A0A1B6QE65
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF79
NCBI CDD KOG1282; Serine carboxypeptidases (lysosomal cathepsin A)
KEGG Orthology K16298; serine carboxypeptidase-like clade IV
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT3G10410 : SERINE CARBOXYPEPTIDASE-LIKE 49
RAP-DB (Rice) LOC_Os07g29620.1 : OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a048016
Brachypodium KQJ92875 , KQK16285 , PNT75133
Barley HORVU1Hr1G010110.1 , HORVU6Hr1G006880.6 , HORVU6Hr1G006880.4 , HORVU6Hr1G006880.5 , HORVU6Hr1G006880.2 , HORVU6Hr1G006880.1 , HORVU2Hr1G109380.5 , HORVU2Hr1G109380.4 , HORVU2Hr1G109380.3 , HORVU2Hr1G109380.1 , HORVU6Hr1G006880.3
Wheat TraesCS2B02G517600 , TraesCS6B02G050700 , TraesCS2D02G490000 , TraesCS2B02G517600 , TraesCS6A02G036100 , TraesCS6D02G041700 , TraesCS2A02G489700 , TraesCS2A02G489700
Populus -


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cDNA sequences
Sobic.002G301200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G004100 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
2 Sobic.001G486700 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
3 Sobic.003G420900 S-formylglutathione hydrolase, putative, expressed K01070: frmB, ESD, S-formylglutathione hydrolase
4 Sobic.002G321400 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
5 Sobic.004G275600 hydrolase, putative, expressed K01438: acetylornithine deacetylase
6 Sobic.009G256000 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
7 Sobic.007G130800 aldehyde dehydrogenase, putative, expressed K00130: betB, betaine-aldehyde dehydrogenase
8 Sobic.004G314500 1-aminocyclopropane-1-carboxylate deaminase, putative, expressed -
9 Sobic.010G059200 cystathionine gamma-synthase, putative, expressed K01760: cysteine-S-conjugate beta-lyase
10 Sobic.006G157000 adenylosuccinate lyase, putative, expressed K01756: purB, adenylosuccinate lyase
11 Sobic.004G060100 ATP synthase, putative, expressed K02145: ATPeV1A, V-type H+-transporting ATPase subunit A
12 Sobic.001G376700 blue-light photoreceptor PHR2, putative, expressed -
13 Sobic.008G021200 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
14 Sobic.009G124000 mesophyll envelope protein(PubMedID : 26976818)@expressed protein -
15 Sobic.009G072000 phosphoribosylformylglycinamidine synthase, putative, expressed K01933: phosphoribosylformylglycinamidine cyclo-ligase
16 Sobic.005G018800 expressed protein -
17 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
18 Sobic.010G134500 exonuclease, putative, expressed -
19 Sobic.001G147300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glyoxalase family protein, putative, expressed -
20 Sobic.003G309300 radical SAM enzyme, putative, expressed K03644: lipA, LIAS, LIP1, lipoyl synthase


Gene co-expression network
sample Sobic002G301200 Sobic002G301200 Sobic005G004100 Sobic005G004100 Sobic002G301200--Sobic005G004100 Sobic001G486700 Sobic001G486700 Sobic002G301200--Sobic001G486700 Sobic003G420900 Sobic003G420900 Sobic002G301200--Sobic003G420900 Sobic002G321400 Sobic002G321400 Sobic002G301200--Sobic002G321400 Sobic004G275600 Sobic004G275600 Sobic002G301200--Sobic004G275600 Sobic009G256000 Sobic009G256000 Sobic002G301200--Sobic009G256000 Sobic007G130800 Sobic007G130800 Sobic002G301200--Sobic007G130800 Sobic004G314500 Sobic004G314500 Sobic002G301200--Sobic004G314500 Sobic010G059200 Sobic010G059200 Sobic002G301200--Sobic010G059200 Sobic005G004100--Sobic009G256000 Sobic004G060100 Sobic004G060100 Sobic005G004100--Sobic004G060100 Sobic004G283600 Sobic004G283600 Sobic005G004100--Sobic004G283600 Sobic005G018800 Sobic005G018800 Sobic005G004100--Sobic005G018800 Sobic007G161200 Sobic007G161200 Sobic005G004100--Sobic007G161200 Sobic008G021200 Sobic008G021200 Sobic005G004100--Sobic008G021200 Sobic008G004300 Sobic008G004300 Sobic005G004100--Sobic008G004300 Sobic005G004100--Sobic002G301200 Sobic002G410700 Sobic002G410700 Sobic005G004100--Sobic002G410700 Sobic009G124000 Sobic009G124000 Sobic001G486700--Sobic009G124000 Sobic001G462200 Sobic001G462200 Sobic001G486700--Sobic001G462200 Sobic004G018000 Sobic004G018000 Sobic001G486700--Sobic004G018000 Sobic003G378400 Sobic003G378400 Sobic001G486700--Sobic003G378400 Sobic001G486700--Sobic002G301200 Sobic001G486700--Sobic004G275600 Sobic001G468600 Sobic001G468600 Sobic001G486700--Sobic001G468600 Sobic009G072000 Sobic009G072000 Sobic001G486700--Sobic009G072000 Sobic009G045900 Sobic009G045900 Sobic001G486700--Sobic009G045900 Sobic001G376700 Sobic001G376700 Sobic003G420900--Sobic001G376700 Sobic004G296800 Sobic004G296800 Sobic003G420900--Sobic004G296800 Sobic003G165800 Sobic003G165800 Sobic003G420900--Sobic003G165800 Sobic009G231100 Sobic009G231100 Sobic003G420900--Sobic009G231100 Sobic002G333100 Sobic002G333100 Sobic003G420900--Sobic002G333100 Sobic003G420900--Sobic004G275600 Sobic010G134500 Sobic010G134500 Sobic003G420900--Sobic010G134500 Sobic003G261200 Sobic003G261200 Sobic003G420900--Sobic003G261200 Sobic001G543700 Sobic001G543700 Sobic003G420900--Sobic001G543700 Sobic002G321400--Sobic004G060100 Sobic002G321400--Sobic008G021200 Sobic002G321400--Sobic009G256000 Sobic002G321400--Sobic005G018800 Sobic001G435400 Sobic001G435400 Sobic002G321400--Sobic001G435400 Sobic002G321400--Sobic007G161200 Sobic002G321400--Sobic002G301200 Sobic002G321400--Sobic004G283600 Sobic004G094700 Sobic004G094700 Sobic002G321400--Sobic004G094700 Sobic003G309300 Sobic003G309300 Sobic004G275600--Sobic003G309300 Sobic003G165101 Sobic003G165101 Sobic004G275600--Sobic003G165101 Sobic001G537500 Sobic001G537500 Sobic004G275600--Sobic001G537500 Sobic004G275600--Sobic009G124000 Sobic006G073200 Sobic006G073200 Sobic004G275600--Sobic006G073200 Sobic007G071900 Sobic007G071900 Sobic004G275600--Sobic007G071900 Sobic004G275600--Sobic003G420900 Sobic008G067100 Sobic008G067100 Sobic004G275600--Sobic008G067100 Sobic004G257100 Sobic004G257100 Sobic004G275600--Sobic004G257100 Sobic009G256000--Sobic005G004100 Sobic009G256000--Sobic004G060100 Sobic009G256000--Sobic008G021200 Sobic009G256000--Sobic007G161200 Sobic009G256000--Sobic005G018800 Sobic009G256000--Sobic004G283600 Sobic003G200800 Sobic003G200800 Sobic009G256000--Sobic003G200800 Sobic009G256000--Sobic002G410700 Sobic006G237200 Sobic006G237200 Sobic009G256000--Sobic006G237200 Sobic005G224500 Sobic005G224500 Sobic007G130800--Sobic005G224500 Sobic007G190200 Sobic007G190200 Sobic007G130800--Sobic007G190200 Sobic006G074300 Sobic006G074300 Sobic007G130800--Sobic006G074300 Sobic007G130800--Sobic002G301200 Sobic001G147300 Sobic001G147300 Sobic007G130800--Sobic001G147300 Sobic008G178800 Sobic008G178800 Sobic007G130800--Sobic008G178800 Sobic010G258500 Sobic010G258500 Sobic007G130800--Sobic010G258500 Sobic001G012200 Sobic001G012200 Sobic007G130800--Sobic001G012200 Sobic004G257700 Sobic004G257700 Sobic007G130800--Sobic004G257700 Sobic001G067300 Sobic001G067300 Sobic004G314500--Sobic001G067300 Sobic004G314500--Sobic009G124000 Sobic001G380500 Sobic001G380500 Sobic004G314500--Sobic001G380500 Sobic009G029700 Sobic009G029700 Sobic004G314500--Sobic009G029700 Sobic009G093200 Sobic009G093200 Sobic004G314500--Sobic009G093200 Sobic005G140500 Sobic005G140500 Sobic004G314500--Sobic005G140500 Sobic004G314500--Sobic003G309300 Sobic004G314500--Sobic002G301200 Sobic004G314500--Sobic001G486700 Sobic010G059200--Sobic009G124000 Sobic010G059200--Sobic003G165800 Sobic004G124100 Sobic004G124100 Sobic010G059200--Sobic004G124100 Sobic010G059200--Sobic003G420900 Sobic010G123300 Sobic010G123300 Sobic010G059200--Sobic010G123300 Sobic010G059200--Sobic002G301200 Sobic010G059200--Sobic004G296800 Sobic010G059200--Sobic001G376700 Sobic001G408800 Sobic001G408800 Sobic010G059200--Sobic001G408800
Octagon: transcription factors


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