Gene annotation
Transcriptome id Sobic.007G130800.1,Sobic.007G130800.2
Synonym ALDH10A8, Sb07g020650
Functional annotation aldehyde dehydrogenase, putative, expressed
UniProt Q43828 , C5YL07 , U5U043 , U5U008 , A0A1Z5R9L1
Pfam PF00171
Panther DB PTHR11699 PTHR11699:SF187
NCBI CDD -
KEGG Orthology K00130; betB, betaine-aldehyde dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G48170 : aldehyde dehydrogenase 10A9,aldehyde dehydrogenase 10A8
RAP-DB (Rice) LOC_Os08g32870.1 : aldehyde dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a024255 , Zm00025a006003 , Zm00025a022994 , Zm00025a022408 , Zm00025a031071
Brachypodium KQJ98313 , KQJ98312
Barley HORVU6Hr1G087460.9 , HORVU6Hr1G087460.8 , HORVU6Hr1G087460.7 , HORVU6Hr1G087460.6 , HORVU6Hr1G087460.5 , HORVU6Hr1G087460.4 , HORVU6Hr1G087460.3 , HORVU6Hr1G087460.2 , HORVU6Hr1G087460.1
Wheat TraesCS6D02G355000 , TraesCS6D02G355000 , TraesCS6B02G408100 , TraesCS6B02G408100 , TraesCS6A02G371100
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.007G130800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G224500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@xylanase inhibitor, putative, expressed -
2 Sobic.007G190200 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
3 Sobic.006G074300 LTPL102 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.002G301200 OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed K16298: serine carboxypeptidase-like clade IV
5 Sobic.001G147300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glyoxalase family protein, putative, expressed -
6 Sobic.008G178800 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed K00549: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
7 Sobic.010G258500 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed -
8 Sobic.001G012200 similar to Cytochrome P450 71E1(PubMedID : 24655390)@4-hydroxyphenylacetaldehyde oxime monooxygenase(PubMedID : 27964718)@cytochrome P450, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
9 Sobic.004G257700 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
10 Sobic.003G131800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@major facilitator superfamily antiporter, putative, expressed -
11 Sobic.001G012600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
12 Sobic.002G366500 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
13 Sobic.001G173500 - -
14 Sobic.003G134900 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.006G175700 down-regulated TF in developmental senescence(PubMedID : 27586543)@putative basic helix-loop-helix (bHLH) transcription factor(PubmedID : 24048646)@anthocyanin regulatory Lc protein, putative, expressed -
16 Sobic.007G195300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
17 Sobic.008G030700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.003G173700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
19 Sobic.003G327700 cysteine proteinase inhibitor (cystatin)(PubMedID : 8709954)@cysteine proteinase inhibitor precursor protein, putative, expressed -
20 Sobic.004G296800 3-isopropylmalate dehydratase small subunit 2, putative, expressed K01704: leuD, 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit


Gene co-expression network
sample Sobic007G130800 Sobic007G130800 Sobic005G224500 Sobic005G224500 Sobic007G130800--Sobic005G224500 Sobic007G190200 Sobic007G190200 Sobic007G130800--Sobic007G190200 Sobic006G074300 Sobic006G074300 Sobic007G130800--Sobic006G074300 Sobic002G301200 Sobic002G301200 Sobic007G130800--Sobic002G301200 Sobic001G147300 Sobic001G147300 Sobic007G130800--Sobic001G147300 Sobic008G178800 Sobic008G178800 Sobic007G130800--Sobic008G178800 Sobic010G258500 Sobic010G258500 Sobic007G130800--Sobic010G258500 Sobic001G012200 Sobic001G012200 Sobic007G130800--Sobic001G012200 Sobic004G257700 Sobic004G257700 Sobic007G130800--Sobic004G257700 Sobic009G222000 Sobic009G222000 Sobic005G224500--Sobic009G222000 Sobic005G224500--Sobic006G074300 Sobic005G224500--Sobic007G130800 Sobic002G366500 Sobic002G366500 Sobic005G224500--Sobic002G366500 Sobic005G116500 Sobic005G116500 Sobic005G224500--Sobic005G116500 Sobic005G224500--Sobic001G147300 Sobic003G134900 Sobic003G134900 Sobic005G224500--Sobic003G134900 Sobic007G195300 Sobic007G195300 Sobic005G224500--Sobic007G195300 Sobic008G091557 Sobic008G091557 Sobic005G224500--Sobic008G091557 Sobic009G070700 Sobic009G070700 Sobic007G190200--Sobic009G070700 Sobic009G070600 Sobic009G070600 Sobic007G190200--Sobic009G070600 Sobic007G190200--Sobic001G012200 Sobic007G190200--Sobic004G257700 Sobic001G345900 Sobic001G345900 Sobic007G190200--Sobic001G345900 Sobic001G012600 Sobic001G012600 Sobic007G190200--Sobic001G012600 Sobic003G007800 Sobic003G007800 Sobic007G190200--Sobic003G007800 Sobic007G190200--Sobic007G130800 Sobic001G334900 Sobic001G334900 Sobic007G190200--Sobic001G334900 Sobic006G074300--Sobic002G366500 Sobic006G074300--Sobic009G222000 Sobic006G074300--Sobic005G116500 Sobic006G074300--Sobic005G224500 Sobic006G074300--Sobic007G130800 Sobic006G074300--Sobic007G195300 Sobic002G278800 Sobic002G278800 Sobic006G074300--Sobic002G278800 Sobic003G131800 Sobic003G131800 Sobic006G074300--Sobic003G131800 Sobic002G278700 Sobic002G278700 Sobic006G074300--Sobic002G278700 Sobic005G004100 Sobic005G004100 Sobic002G301200--Sobic005G004100 Sobic001G486700 Sobic001G486700 Sobic002G301200--Sobic001G486700 Sobic003G420900 Sobic003G420900 Sobic002G301200--Sobic003G420900 Sobic002G321400 Sobic002G321400 Sobic002G301200--Sobic002G321400 Sobic004G275600 Sobic004G275600 Sobic002G301200--Sobic004G275600 Sobic009G256000 Sobic009G256000 Sobic002G301200--Sobic009G256000 Sobic002G301200--Sobic007G130800 Sobic004G314500 Sobic004G314500 Sobic002G301200--Sobic004G314500 Sobic010G059200 Sobic010G059200 Sobic002G301200--Sobic010G059200 Sobic003G327700 Sobic003G327700 Sobic001G147300--Sobic003G327700 Sobic001G147300--Sobic007G130800 Sobic001G173500 Sobic001G173500 Sobic001G147300--Sobic001G173500 Sobic001G147300--Sobic005G224500 Sobic001G147300--Sobic002G301200 Sobic001G147300--Sobic002G366500 Sobic009G033200 Sobic009G033200 Sobic001G147300--Sobic009G033200 Sobic006G161900 Sobic006G161900 Sobic001G147300--Sobic006G161900 Sobic007G069200 Sobic007G069200 Sobic001G147300--Sobic007G069200 Sobic006G038200 Sobic006G038200 Sobic008G178800--Sobic006G038200 Sobic009G063400 Sobic009G063400 Sobic008G178800--Sobic009G063400 Sobic008G178800--Sobic010G258500 Sobic002G347300 Sobic002G347300 Sobic008G178800--Sobic002G347300 Sobic009G125900 Sobic009G125900 Sobic008G178800--Sobic009G125900 Sobic004G282700 Sobic004G282700 Sobic008G178800--Sobic004G282700 Sobic009G232200 Sobic009G232200 Sobic008G178800--Sobic009G232200 Sobic009G017500 Sobic009G017500 Sobic008G178800--Sobic009G017500 Sobic010G067500 Sobic010G067500 Sobic008G178800--Sobic010G067500 Sobic010G258500--Sobic008G178800 Sobic010G258500--Sobic006G038200 Sobic003G216500 Sobic003G216500 Sobic010G258500--Sobic003G216500 Sobic004G182500 Sobic004G182500 Sobic010G258500--Sobic004G182500 Sobic010G258500--Sobic009G232200 Sobic010G258500--Sobic007G130800 Sobic002G075500 Sobic002G075500 Sobic010G258500--Sobic002G075500 Sobic006G237200 Sobic006G237200 Sobic010G258500--Sobic006G237200 Sobic001G436100 Sobic001G436100 Sobic010G258500--Sobic001G436100 Sobic001G012300 Sobic001G012300 Sobic001G012200--Sobic001G012300 Sobic001G012200--Sobic001G012600 Sobic001G012200--Sobic001G334900 Sobic001G012400 Sobic001G012400 Sobic001G012200--Sobic001G012400 Sobic010G225001 Sobic010G225001 Sobic001G012200--Sobic010G225001 Sobic007G181000 Sobic007G181000 Sobic001G012200--Sobic007G181000 Sobic001G012200--Sobic004G257700 Sobic001G255300 Sobic001G255300 Sobic001G012200--Sobic001G255300 Sobic001G012200--Sobic001G345900 Sobic005G190800 Sobic005G190800 Sobic004G257700--Sobic005G190800 Sobic002G128600 Sobic002G128600 Sobic004G257700--Sobic002G128600 Sobic001G472000 Sobic001G472000 Sobic004G257700--Sobic001G472000 Sobic008G189500 Sobic008G189500 Sobic004G257700--Sobic008G189500 Sobic001G068600 Sobic001G068600 Sobic004G257700--Sobic001G068600 Sobic005G029400 Sobic005G029400 Sobic004G257700--Sobic005G029400 Sobic005G218201 Sobic005G218201 Sobic004G257700--Sobic005G218201 Sobic005G218600 Sobic005G218600 Sobic004G257700--Sobic005G218600 Sobic004G257700--Sobic001G255300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.