Gene annotation
Transcriptome id Sobic.006G074300.1
Synonym Sb06g016170
Functional annotation LTPL102 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5YG98
Pfam PF14368
Panther DB PTHR33122 PTHR33122:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05960 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os04g33920.1 : LTPL102 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a011482 , Zm00025a011480 , Zm00025a012727
Brachypodium KQJ82549 , PNT73198
Barley HORVU3Hr1G085680.30 , HORVU3Hr1G085680.31 , HORVU3Hr1G085680.18 , HORVU3Hr1G085680.19 , HORVU3Hr1G085680.17 , HORVU7Hr1G102030.1 , HORVU2Hr1G073680.1 , HORVU2Hr1G073680.2 , HORVU2Hr1G073680.3 , HORVU3Hr1G085680.4 , HORVU3Hr1G085680.5 , HORVU3Hr1G085680.20 , HORVU3Hr1G085680.27 , HORVU3Hr1G085680.29 , HORVU3Hr1G085680.28 , HORVU2Hr1G122320.2 , HORVU2Hr1G122320.3
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G366500 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
2 Sobic.009G222000 LTPL153 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.005G116500 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
4 Sobic.005G224500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@xylanase inhibitor, putative, expressed -
5 Sobic.007G130800 aldehyde dehydrogenase, putative, expressed K00130: betB, betaine-aldehyde dehydrogenase
6 Sobic.007G195300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
7 Sobic.002G278800 ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
8 Sobic.003G131800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@major facilitator superfamily antiporter, putative, expressed -
9 Sobic.002G278700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
10 Sobic.001G012600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
11 Sobic.001G332966 - -
12 Sobic.003G340800 transmembrane amino acid transporter protein, putative, expressed -
13 Sobic.009G136500 Major facilitator superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
14 Sobic.001G012200 similar to Cytochrome P450 71E1(PubMedID : 24655390)@4-hydroxyphenylacetaldehyde oxime monooxygenase(PubMedID : 27964718)@cytochrome P450, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
15 Sobic.003G134900 plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.002G347300 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
17 Sobic.001G338000 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
18 Sobic.006G175700 down-regulated TF in developmental senescence(PubMedID : 27586543)@putative basic helix-loop-helix (bHLH) transcription factor(PubmedID : 24048646)@anthocyanin regulatory Lc protein, putative, expressed -
19 Sobic.003G006866 - -
20 Sobic.003G173700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase


Gene co-expression network
sample Sobic006G074300 Sobic006G074300 Sobic002G366500 Sobic002G366500 Sobic006G074300--Sobic002G366500 Sobic009G222000 Sobic009G222000 Sobic006G074300--Sobic009G222000 Sobic005G116500 Sobic005G116500 Sobic006G074300--Sobic005G116500 Sobic005G224500 Sobic005G224500 Sobic006G074300--Sobic005G224500 Sobic007G130800 Sobic007G130800 Sobic006G074300--Sobic007G130800 Sobic007G195300 Sobic007G195300 Sobic006G074300--Sobic007G195300 Sobic002G278800 Sobic002G278800 Sobic006G074300--Sobic002G278800 Sobic003G131800 Sobic003G131800 Sobic006G074300--Sobic003G131800 Sobic002G278700 Sobic002G278700 Sobic006G074300--Sobic002G278700 Sobic002G366500--Sobic006G074300 Sobic002G366500--Sobic009G222000 Sobic002G366500--Sobic005G116500 Sobic002G366500--Sobic007G195300 Sobic002G366500--Sobic005G224500 Sobic002G366500--Sobic002G278800 Sobic002G366500--Sobic002G278700 Sobic002G366500--Sobic003G131800 Sobic008G136500 Sobic008G136500 Sobic002G366500--Sobic008G136500 Sobic009G222000--Sobic002G366500 Sobic009G222000--Sobic005G224500 Sobic009G222000--Sobic006G074300 Sobic004G232300 Sobic004G232300 Sobic009G222000--Sobic004G232300 Sobic002G141800 Sobic002G141800 Sobic009G222000--Sobic002G141800 Sobic003G244100 Sobic003G244100 Sobic009G222000--Sobic003G244100 Sobic009G222000--Sobic005G116500 Sobic008G091557 Sobic008G091557 Sobic009G222000--Sobic008G091557 Sobic009G116700 Sobic009G116700 Sobic009G222000--Sobic009G116700 Sobic005G116500--Sobic002G366500 Sobic005G116500--Sobic006G074300 Sobic001G012600 Sobic001G012600 Sobic005G116500--Sobic001G012600 Sobic001G012200 Sobic001G012200 Sobic005G116500--Sobic001G012200 Sobic004G257700 Sobic004G257700 Sobic005G116500--Sobic004G257700 Sobic003G134900 Sobic003G134900 Sobic005G116500--Sobic003G134900 Sobic005G116500--Sobic007G195300 Sobic005G116500--Sobic005G224500 Sobic002G347300 Sobic002G347300 Sobic005G116500--Sobic002G347300 Sobic005G224500--Sobic009G222000 Sobic005G224500--Sobic006G074300 Sobic005G224500--Sobic007G130800 Sobic005G224500--Sobic002G366500 Sobic005G224500--Sobic005G116500 Sobic001G147300 Sobic001G147300 Sobic005G224500--Sobic001G147300 Sobic005G224500--Sobic003G134900 Sobic005G224500--Sobic007G195300 Sobic005G224500--Sobic008G091557 Sobic007G130800--Sobic005G224500 Sobic007G190200 Sobic007G190200 Sobic007G130800--Sobic007G190200 Sobic007G130800--Sobic006G074300 Sobic002G301200 Sobic002G301200 Sobic007G130800--Sobic002G301200 Sobic007G130800--Sobic001G147300 Sobic008G178800 Sobic008G178800 Sobic007G130800--Sobic008G178800 Sobic010G258500 Sobic010G258500 Sobic007G130800--Sobic010G258500 Sobic007G130800--Sobic001G012200 Sobic007G130800--Sobic004G257700 Sobic007G195300--Sobic003G131800 Sobic008G030700 Sobic008G030700 Sobic007G195300--Sobic008G030700 Sobic007G195300--Sobic002G278700 Sobic007G195300--Sobic002G278800 Sobic010G012400 Sobic010G012400 Sobic007G195300--Sobic010G012400 Sobic001G249500 Sobic001G249500 Sobic007G195300--Sobic001G249500 Sobic006G175700 Sobic006G175700 Sobic007G195300--Sobic006G175700 Sobic005G190800 Sobic005G190800 Sobic007G195300--Sobic005G190800 Sobic004G157550 Sobic004G157550 Sobic007G195300--Sobic004G157550 Sobic002G278800--Sobic002G278700 Sobic003G173700 Sobic003G173700 Sobic002G278800--Sobic003G173700 Sobic001G332966 Sobic001G332966 Sobic002G278800--Sobic001G332966 Sobic002G278800--Sobic003G131800 Sobic002G278800--Sobic008G030700 Sobic002G278800--Sobic006G175700 Sobic002G278800--Sobic010G012400 Sobic001G338000 Sobic001G338000 Sobic002G278800--Sobic001G338000 Sobic009G136500 Sobic009G136500 Sobic002G278800--Sobic009G136500 Sobic003G131800--Sobic002G278700 Sobic003G131800--Sobic002G278800 Sobic003G131800--Sobic008G030700 Sobic003G131800--Sobic006G175700 Sobic003G131800--Sobic007G195300 Sobic003G131800--Sobic010G012400 Sobic003G131800--Sobic003G173700 Sobic003G131800--Sobic001G249500 Sobic003G131800--Sobic009G136500 Sobic002G278700--Sobic002G278800 Sobic002G278700--Sobic010G012400 Sobic002G278700--Sobic003G131800 Sobic002G278700--Sobic008G030700 Sobic002G278700--Sobic003G173700 Sobic002G278700--Sobic001G332966 Sobic002G278700--Sobic006G175700 Sobic002G278700--Sobic009G136500 Sobic002G278700--Sobic001G338000
Octagon: transcription factors


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