Gene annotation
Transcriptome id Sobic.001G147300.2,Sobic.001G147300.1
Synonym Sb01g012840
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
glyoxalase family protein, putative, expressed
UniProt A0A1Z5S5P9 , C5WQF6
Pfam PF12681
Panther DB PTHR10374 PTHR10374:SF11
NCBI CDD KOG2944; Glyoxalase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G32090 : Lactoylglutathione lyase / glyoxalase I family protein
RAP-DB (Rice) LOC_Os03g45720.1 : glyoxalase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a007547
Brachypodium KQK13892
Barley HORVU4Hr1G002510.4 , HORVU4Hr1G002510.2 , HORVU4Hr1G002510.3 , HORVU4Hr1G002510.1
Wheat TraesCS4B02G015900 , TraesCS4B02G015900 , TraesCS4D02G014300
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G147300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G327700 cysteine proteinase inhibitor (cystatin)(PubMedID : 8709954)@cysteine proteinase inhibitor precursor protein, putative, expressed -
2 Sobic.007G130800 aldehyde dehydrogenase, putative, expressed K00130: betB, betaine-aldehyde dehydrogenase
3 Sobic.001G173500 - -
4 Sobic.005G224500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@xylanase inhibitor, putative, expressed -
5 Sobic.002G301200 OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed K16298: serine carboxypeptidase-like clade IV
6 Sobic.002G366500 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
7 Sobic.009G033200 IN2-1 protein, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.006G161900 expressed protein K08331: autophagy-related protein 13
9 Sobic.007G069200 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
10 Sobic.007G195300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
11 Sobic.003G131800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@major facilitator superfamily antiporter, putative, expressed -
12 Sobic.006G074300 LTPL102 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.001G222600 cyanate hydratase, putative, expressed K01725: cyanate lyase
14 Sobic.001G067300 histidinol dehydrogenase, chloroplast precursor, putative, expressed K00013: histidinol dehydrogenase
15 Sobic.003G244200 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
16 Sobic.002G121300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSCP56 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
17 Sobic.004G314500 1-aminocyclopropane-1-carboxylate deaminase, putative, expressed -
18 Sobic.003G256100 -(PubMedID : 29147737)@Two Pore Ca channel(PubMedID : 22196357)@two pore calcium channel protein 1, putative, expressed K16900: TPC1, two pore calcium channel protein, plant
19 Sobic.009G222000 LTPL153 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.006G029800 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase


Gene co-expression network
sample Sobic001G147300 Sobic001G147300 Sobic003G327700 Sobic003G327700 Sobic001G147300--Sobic003G327700 Sobic007G130800 Sobic007G130800 Sobic001G147300--Sobic007G130800 Sobic001G173500 Sobic001G173500 Sobic001G147300--Sobic001G173500 Sobic005G224500 Sobic005G224500 Sobic001G147300--Sobic005G224500 Sobic002G301200 Sobic002G301200 Sobic001G147300--Sobic002G301200 Sobic002G366500 Sobic002G366500 Sobic001G147300--Sobic002G366500 Sobic009G033200 Sobic009G033200 Sobic001G147300--Sobic009G033200 Sobic006G161900 Sobic006G161900 Sobic001G147300--Sobic006G161900 Sobic007G069200 Sobic007G069200 Sobic001G147300--Sobic007G069200 Sobic003G327700--Sobic001G173500 Sobic001G363700 Sobic001G363700 Sobic003G327700--Sobic001G363700 Sobic003G327700--Sobic001G147300 Sobic003G131800 Sobic003G131800 Sobic003G327700--Sobic003G131800 Sobic008G136500 Sobic008G136500 Sobic003G327700--Sobic008G136500 Sobic003G007800 Sobic003G007800 Sobic003G327700--Sobic003G007800 Sobic006G175700 Sobic006G175700 Sobic003G327700--Sobic006G175700 Sobic008G189500 Sobic008G189500 Sobic003G327700--Sobic008G189500 Sobic005G190800 Sobic005G190800 Sobic003G327700--Sobic005G190800 Sobic007G130800--Sobic005G224500 Sobic007G190200 Sobic007G190200 Sobic007G130800--Sobic007G190200 Sobic006G074300 Sobic006G074300 Sobic007G130800--Sobic006G074300 Sobic007G130800--Sobic002G301200 Sobic007G130800--Sobic001G147300 Sobic008G178800 Sobic008G178800 Sobic007G130800--Sobic008G178800 Sobic010G258500 Sobic010G258500 Sobic007G130800--Sobic010G258500 Sobic001G012200 Sobic001G012200 Sobic007G130800--Sobic001G012200 Sobic004G257700 Sobic004G257700 Sobic007G130800--Sobic004G257700 Sobic001G173500--Sobic003G327700 Sobic003G244200 Sobic003G244200 Sobic001G173500--Sobic003G244200 Sobic003G125701 Sobic003G125701 Sobic001G173500--Sobic003G125701 Sobic001G222600 Sobic001G222600 Sobic001G173500--Sobic001G222600 Sobic001G173500--Sobic007G069200 Sobic001G173500--Sobic001G147300 Sobic006G084400 Sobic006G084400 Sobic001G173500--Sobic006G084400 Sobic001G012600 Sobic001G012600 Sobic001G173500--Sobic001G012600 Sobic001G173500--Sobic001G012200 Sobic009G222000 Sobic009G222000 Sobic005G224500--Sobic009G222000 Sobic005G224500--Sobic006G074300 Sobic005G224500--Sobic007G130800 Sobic005G224500--Sobic002G366500 Sobic005G116500 Sobic005G116500 Sobic005G224500--Sobic005G116500 Sobic005G224500--Sobic001G147300 Sobic003G134900 Sobic003G134900 Sobic005G224500--Sobic003G134900 Sobic007G195300 Sobic007G195300 Sobic005G224500--Sobic007G195300 Sobic008G091557 Sobic008G091557 Sobic005G224500--Sobic008G091557 Sobic005G004100 Sobic005G004100 Sobic002G301200--Sobic005G004100 Sobic001G486700 Sobic001G486700 Sobic002G301200--Sobic001G486700 Sobic003G420900 Sobic003G420900 Sobic002G301200--Sobic003G420900 Sobic002G321400 Sobic002G321400 Sobic002G301200--Sobic002G321400 Sobic004G275600 Sobic004G275600 Sobic002G301200--Sobic004G275600 Sobic009G256000 Sobic009G256000 Sobic002G301200--Sobic009G256000 Sobic002G301200--Sobic007G130800 Sobic004G314500 Sobic004G314500 Sobic002G301200--Sobic004G314500 Sobic010G059200 Sobic010G059200 Sobic002G301200--Sobic010G059200 Sobic002G366500--Sobic006G074300 Sobic002G366500--Sobic009G222000 Sobic002G366500--Sobic005G116500 Sobic002G366500--Sobic007G195300 Sobic002G366500--Sobic005G224500 Sobic002G278800 Sobic002G278800 Sobic002G366500--Sobic002G278800 Sobic002G278700 Sobic002G278700 Sobic002G366500--Sobic002G278700 Sobic002G366500--Sobic003G131800 Sobic002G366500--Sobic008G136500 Sobic009G033200--Sobic005G190800 Sobic010G161600 Sobic010G161600 Sobic009G033200--Sobic010G161600 Sobic008G032000 Sobic008G032000 Sobic009G033200--Sobic008G032000 Sobic004G038300 Sobic004G038300 Sobic009G033200--Sobic004G038300 Sobic004G335500 Sobic004G335500 Sobic009G033200--Sobic004G335500 Sobic005G141000 Sobic005G141000 Sobic009G033200--Sobic005G141000 Sobic002G209800 Sobic002G209800 Sobic009G033200--Sobic002G209800 Sobic009G033200--Sobic008G189500 Sobic009G033200--Sobic003G007800 Sobic007G075700 Sobic007G075700 Sobic006G161900--Sobic007G075700 Sobic010G052300 Sobic010G052300 Sobic006G161900--Sobic010G052300 Sobic001G376700 Sobic001G376700 Sobic006G161900--Sobic001G376700 Sobic003G234101 Sobic003G234101 Sobic006G161900--Sobic003G234101 Sobic003G435100 Sobic003G435100 Sobic006G161900--Sobic003G435100 Sobic004G193600 Sobic004G193600 Sobic006G161900--Sobic004G193600 Sobic006G249400 Sobic006G249400 Sobic006G161900--Sobic006G249400 Sobic004G296800 Sobic004G296800 Sobic006G161900--Sobic004G296800 Sobic010G171300 Sobic010G171300 Sobic006G161900--Sobic010G171300 Sobic003G216500 Sobic003G216500 Sobic007G069200--Sobic003G216500 Sobic001G447600 Sobic001G447600 Sobic007G069200--Sobic001G447600 Sobic007G069200--Sobic001G173500 Sobic007G069200--Sobic003G244200 Sobic005G133900 Sobic005G133900 Sobic007G069200--Sobic005G133900 Sobic009G072000 Sobic009G072000 Sobic007G069200--Sobic009G072000 Sobic007G025400 Sobic007G025400 Sobic007G069200--Sobic007G025400 Sobic010G054000 Sobic010G054000 Sobic007G069200--Sobic010G054000 Sobic006G029800 Sobic006G029800 Sobic007G069200--Sobic006G029800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.