Gene annotation
| Transcriptome id | Sobic.001G222600.1 |
|---|---|
| Synonym | CYN, Sb01g019580 |
| Functional annotation | cyanate hydratase, putative, expressed |
| UniProt | C5WYI7 |
| Pfam | PF02560 |
| Panther DB | PTHR34186 PTHR34186:SF1 |
| NCBI CDD | - |
| KEGG Orthology | K01725; cyanate lyase |
| Gene Ontology | GO:0009439; cyanate metabolic process |
Orthologs (automatic annotation)
| TAIR | AT3G23490 : cyanase |
|---|---|
| RAP-DB (Rice) | LOC_Os10g33270.1 : cyanate hydratase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a006655 |
| Brachypodium | KQJ97040 |
| Barley | HORVU1Hr1G039870.2 , HORVU1Hr1G039870.3 , HORVU1Hr1G039870.1 , HORVU1Hr1G039870.6 , HORVU1Hr1G039870.4 , HORVU1Hr1G039870.5 |
| Wheat | TraesCS1B02G168600 , TraesCS1D02G148000 , TraesCS1A02G151000 , TraesCS1A02G151000 , TraesCS4A02G007600 |
| Populus | - |
JBrowse
| Sobic.001G222600 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G033100 | expressed protein | - |
| 2 | Sobic.006G084400 | OsAPx7 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed | K00434: L-ascorbate peroxidase |
| 3 | Sobic.005G038400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@RCN1 Centroradialis-like1 homogous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed | - |
| 4 | Sobic.005G133700 | CCB1, putative, expressed | - |
| 5 | Sobic.007G079400 | cytidylyltransferase domain containing protein, expressed | K00967: ethanolamine-phosphate cytidylyltransferase |
| 6 | Sobic.001G173500 | - | - |
| 7 | Sobic.009G155600 | 60S acidic ribosomal protein, putative, expressed | K02943: RP-LP2, large subunit ribosomal protein LP2 |
| 8 | Sobic.002G200900 | alpha/beta hydrolase fold, putative, expressed | - |
| 9 | Sobic.004G020300 | expressed protein | - |
| 10 | Sobic.003G042700 | TMS membrane protein/tumour differentially expressed protein, putative, expressed | - |
| 11 | Sobic.006G108200 | expressed protein | - |
| 12 | Sobic.010G156000 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 13 | Sobic.009G168600 | low photochemical bleaching 1 protein, putative, expressed | - |
| 14 | Sobic.007G208300 | peptidase, putative, expressed | K14677: aminoacylase |
| 15 | Sobic.002G393700 | expressed protein | - |
| 16 | Sobic.003G022300 | SOUL heme-binding protein, putative, expressed | - |
| 17 | Sobic.009G210200 | Acid phosphatase/vanadium-dependent haloperoxidase-related protein(PubMedID : 26465154)@Divergent PAP2 family domain containing protein, expressed | - |
| 18 | Sobic.002G225400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@cytochrome P450, putative, expressed | K09843: (+)-abscisic acid 8'-hydroxylase |
| 19 | Sobic.002G304100 | tRNA synthetases class II domain containing protein, expressed | K01893: NARS, asparaginyl-tRNA synthetase |
| 20 | Sobic.008G015800 | major facilitator superfamily antiporter, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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