Gene annotation
Transcriptome id Sobic.005G038400.1
Synonym ATC, Sb05g003200
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Up-reguralion under drought (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
RCN1 Centroradialis-like1 homogous to TFL1 gene
contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed
UniProt C5Y4P5
Pfam PF01161
Panther DB PTHR11362 PTHR11362:SF13
NCBI CDD KOG3346; Phosphatidylethanolamine binding protein
KEGG Orthology -
Gene Ontology GO:0009910; negative regulation of flower development GO:0003712transcription coregulator activity


Orthologs (automatic annotation)
TAIR AT2G27550 : centroradialis
RAP-DB (Rice) LOC_Os11g05470.1 : RCN1 Centroradialis-like1 homogous to TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed
MaizeGDB (Corn) Zm00025a053891 , Zm00025a033490 , Zm00025a029040
Brachypodium KQJ92229
Barley HORVU5Hr1G042230.14 , HORVU5Hr1G042230.15 , HORVU5Hr1G042230.16 , HORVU5Hr1G042230.10 , HORVU5Hr1G042230.11 , HORVU5Hr1G042230.12 , HORVU5Hr1G042230.13 , HORVU5Hr1G042230.8 , HORVU5Hr1G042230.9 , HORVU5Hr1G042230.6 , HORVU5Hr1G042230.7 , HORVU5Hr1G042230.4 , HORVU5Hr1G042230.5 , HORVU5Hr1G042230.3
Wheat TraesCS5D02G136300 , TraesCS5D02G136300 , TraesCS5A02G128600 , TraesCS5B02G127600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G108800 - -
2 Sobic.002G225400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@cytochrome P450, putative, expressed K09843: (+)-abscisic acid 8'-hydroxylase
3 Sobic.006G084400 OsAPx7 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
4 Sobic.001G222600 cyanate hydratase, putative, expressed K01725: cyanate lyase
5 Sobic.003G131800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@major facilitator superfamily antiporter, putative, expressed -
6 Sobic.009G185201 - -
7 Sobic.009G206300 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
8 Sobic.001G469700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
9 Sobic.002G278800 ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
10 Sobic.004G338100 glycogen synthase 1, putative, expressed -
11 Sobic.007G108400 expressed protein -
12 Sobic.002G278700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
13 Sobic.009G136500 Major facilitator superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
14 Sobic.007G195300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
15 Sobic.007G079400 cytidylyltransferase domain containing protein, expressed K00967: ethanolamine-phosphate cytidylyltransferase
16 Sobic.007G069000 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
17 Sobic.003G042700 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
18 Sobic.003G173700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
19 Sobic.008G030700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.010G259100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized UPF0114 domain containing protein, expressed -


Gene co-expression network
sample Sobic005G038400 Sobic005G038400 Sobic007G108800 Sobic007G108800 Sobic005G038400--Sobic007G108800 Sobic002G225400 Sobic002G225400 Sobic005G038400--Sobic002G225400 Sobic006G084400 Sobic006G084400 Sobic005G038400--Sobic006G084400 Sobic001G222600 Sobic001G222600 Sobic005G038400--Sobic001G222600 Sobic003G131800 Sobic003G131800 Sobic005G038400--Sobic003G131800 Sobic009G185201 Sobic009G185201 Sobic005G038400--Sobic009G185201 Sobic009G206300 Sobic009G206300 Sobic005G038400--Sobic009G206300 Sobic001G469700 Sobic001G469700 Sobic005G038400--Sobic001G469700 Sobic002G278800 Sobic002G278800 Sobic005G038400--Sobic002G278800 Sobic007G108800--Sobic005G038400 Sobic007G108800--Sobic006G084400 Sobic007G108800--Sobic002G225400 Sobic007G108800--Sobic009G185201 Sobic004G338100 Sobic004G338100 Sobic007G108800--Sobic004G338100 Sobic010G259100 Sobic010G259100 Sobic007G108800--Sobic010G259100 Sobic007G069000 Sobic007G069000 Sobic007G108800--Sobic007G069000 Sobic001G033100 Sobic001G033100 Sobic007G108800--Sobic001G033100 Sobic007G108800--Sobic003G131800 Sobic002G225400--Sobic009G185201 Sobic002G225400--Sobic006G084400 Sobic002G225400--Sobic007G108800 Sobic002G225400--Sobic009G206300 Sobic002G225400--Sobic005G038400 Sobic002G225400--Sobic010G259100 Sobic002G109300 Sobic002G109300 Sobic002G225400--Sobic002G109300 Sobic007G123800 Sobic007G123800 Sobic002G225400--Sobic007G123800 Sobic010G077250 Sobic010G077250 Sobic002G225400--Sobic010G077250 Sobic006G084400--Sobic002G225400 Sobic001G500100 Sobic001G500100 Sobic006G084400--Sobic001G500100 Sobic006G084400--Sobic001G033100 Sobic006G084400--Sobic001G222600 Sobic006G084400--Sobic009G185201 Sobic006G084400--Sobic007G108800 Sobic009G210200 Sobic009G210200 Sobic006G084400--Sobic009G210200 Sobic006G084400--Sobic005G038400 Sobic003G375700 Sobic003G375700 Sobic006G084400--Sobic003G375700 Sobic001G222600--Sobic001G033100 Sobic001G222600--Sobic006G084400 Sobic001G222600--Sobic005G038400 Sobic005G133700 Sobic005G133700 Sobic001G222600--Sobic005G133700 Sobic007G079400 Sobic007G079400 Sobic001G222600--Sobic007G079400 Sobic001G173500 Sobic001G173500 Sobic001G222600--Sobic001G173500 Sobic009G155600 Sobic009G155600 Sobic001G222600--Sobic009G155600 Sobic002G200900 Sobic002G200900 Sobic001G222600--Sobic002G200900 Sobic004G020300 Sobic004G020300 Sobic001G222600--Sobic004G020300 Sobic002G278700 Sobic002G278700 Sobic003G131800--Sobic002G278700 Sobic003G131800--Sobic002G278800 Sobic008G030700 Sobic008G030700 Sobic003G131800--Sobic008G030700 Sobic006G175700 Sobic006G175700 Sobic003G131800--Sobic006G175700 Sobic007G195300 Sobic007G195300 Sobic003G131800--Sobic007G195300 Sobic010G012400 Sobic010G012400 Sobic003G131800--Sobic010G012400 Sobic003G173700 Sobic003G173700 Sobic003G131800--Sobic003G173700 Sobic001G249500 Sobic001G249500 Sobic003G131800--Sobic001G249500 Sobic009G136500 Sobic009G136500 Sobic003G131800--Sobic009G136500 Sobic009G185201--Sobic002G225400 Sobic003G022300 Sobic003G022300 Sobic009G185201--Sobic003G022300 Sobic009G185201--Sobic006G084400 Sobic009G185201--Sobic009G206300 Sobic009G185201--Sobic001G033100 Sobic009G185201--Sobic007G108800 Sobic009G185201--Sobic003G131800 Sobic009G185201--Sobic009G210200 Sobic003G042700 Sobic003G042700 Sobic009G185201--Sobic003G042700 Sobic004G157550 Sobic004G157550 Sobic009G206300--Sobic004G157550 Sobic009G206300--Sobic010G012400 Sobic009G206300--Sobic002G278700 Sobic009G206300--Sobic008G030700 Sobic009G206300--Sobic001G249500 Sobic009G206300--Sobic002G278800 Sobic009G206300--Sobic003G131800 Sobic009G190600 Sobic009G190600 Sobic001G469700--Sobic009G190600 Sobic006G176500 Sobic006G176500 Sobic001G469700--Sobic006G176500 Sobic001G469700--Sobic006G084400 Sobic001G469700--Sobic005G038400 Sobic001G469700--Sobic007G079400 Sobic002G393700 Sobic002G393700 Sobic001G469700--Sobic002G393700 Sobic001G469700--Sobic001G173500 Sobic003G125701 Sobic003G125701 Sobic001G469700--Sobic003G125701 Sobic001G469700--Sobic001G222600 Sobic002G278800--Sobic002G278700 Sobic002G278800--Sobic003G173700 Sobic001G332966 Sobic001G332966 Sobic002G278800--Sobic001G332966 Sobic002G278800--Sobic003G131800 Sobic002G278800--Sobic008G030700 Sobic002G278800--Sobic006G175700 Sobic002G278800--Sobic010G012400 Sobic001G338000 Sobic001G338000 Sobic002G278800--Sobic001G338000 Sobic002G278800--Sobic009G136500
Octagon: transcription factors


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