Gene annotation
Transcriptome id Sobic.010G259100.2
Synonym Sb10g029560
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
uncharacterized UPF0114 domain containing protein, expressed
UniProt A0A1W0VUW0
Pfam PF03350
Panther DB PTHR31721 PTHR31721:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G19390 : Uncharacterised protein family (UPF0114)
RAP-DB (Rice) LOC_Os06g49640.1 : uncharacterized UPF0114 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a018441
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G499100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -
2 Sobic.003G409700 rieske domain containing protein, expressed -
3 Sobic.006G235350 - -
4 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
5 Sobic.007G135800 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed K06891: ATP-dependent Clp protease adaptor protein ClpS
6 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
7 Sobic.007G140700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K00131: glyceraldehyde-3-phosphate dehydrogenase (NADP+)
8 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
9 Sobic.008G064500 TPR domain protein, putative, expressed -
10 Sobic.006G213700 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed K13237: peroxisomal 2,4-dienoyl-CoA reductase
11 Sobic.005G028800 astaxanthin synthase KC28, putative, expressed -
12 Sobic.005G091300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
13 Sobic.003G228300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed -
14 Sobic.001G073300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
15 Sobic.001G077300 thioredoxin, putative, expressed -
16 Sobic.001G509200 "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed K11159: carotenoid cleavage oxygenase
17 Sobic.006G084400 OsAPx7 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
18 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.009G132000 expressed protein -
20 Sobic.002G225400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@cytochrome P450, putative, expressed K09843: (+)-abscisic acid 8'-hydroxylase


Gene co-expression network
sample Sobic010G259100 Sobic010G259100 Sobic001G499100 Sobic001G499100 Sobic010G259100--Sobic001G499100 Sobic003G409700 Sobic003G409700 Sobic010G259100--Sobic003G409700 Sobic006G235350 Sobic006G235350 Sobic010G259100--Sobic006G235350 Sobic003G186800 Sobic003G186800 Sobic010G259100--Sobic003G186800 Sobic007G135800 Sobic007G135800 Sobic010G259100--Sobic007G135800 Sobic006G191500 Sobic006G191500 Sobic010G259100--Sobic006G191500 Sobic007G140700 Sobic007G140700 Sobic010G259100--Sobic007G140700 Sobic003G380200 Sobic003G380200 Sobic010G259100--Sobic003G380200 Sobic008G064500 Sobic008G064500 Sobic010G259100--Sobic008G064500 Sobic001G499100--Sobic007G135800 Sobic001G509200 Sobic001G509200 Sobic001G499100--Sobic001G509200 Sobic008G149100 Sobic008G149100 Sobic001G499100--Sobic008G149100 Sobic006G213700 Sobic006G213700 Sobic001G499100--Sobic006G213700 Sobic003G228300 Sobic003G228300 Sobic001G499100--Sobic003G228300 Sobic001G499100--Sobic003G409700 Sobic007G108900 Sobic007G108900 Sobic001G499100--Sobic007G108900 Sobic001G393300 Sobic001G393300 Sobic001G499100--Sobic001G393300 Sobic002G047400 Sobic002G047400 Sobic001G499100--Sobic002G047400 Sobic003G341300 Sobic003G341300 Sobic003G409700--Sobic003G341300 Sobic009G133700 Sobic009G133700 Sobic003G409700--Sobic009G133700 Sobic003G409700--Sobic007G135800 Sobic006G235400 Sobic006G235400 Sobic003G409700--Sobic006G235400 Sobic006G161500 Sobic006G161500 Sobic003G409700--Sobic006G161500 Sobic003G409700--Sobic003G380200 Sobic004G128900 Sobic004G128900 Sobic003G409700--Sobic004G128900 Sobic007G157300 Sobic007G157300 Sobic003G409700--Sobic007G157300 Sobic003G409700--Sobic003G228300 Sobic006G140500 Sobic006G140500 Sobic006G235350--Sobic006G140500 Sobic004G202200 Sobic004G202200 Sobic006G235350--Sobic004G202200 Sobic007G166300 Sobic007G166300 Sobic006G235350--Sobic007G166300 Sobic005G028800 Sobic005G028800 Sobic006G235350--Sobic005G028800 Sobic003G005000 Sobic003G005000 Sobic006G235350--Sobic003G005000 Sobic001G289500 Sobic001G289500 Sobic006G235350--Sobic001G289500 Sobic002G223700 Sobic002G223700 Sobic006G235350--Sobic002G223700 Sobic001G015200 Sobic001G015200 Sobic006G235350--Sobic001G015200 Sobic009G132000 Sobic009G132000 Sobic006G235350--Sobic009G132000 Sobic003G186800--Sobic003G380200 Sobic003G304300 Sobic003G304300 Sobic003G186800--Sobic003G304300 Sobic009G225600 Sobic009G225600 Sobic003G186800--Sobic009G225600 Sobic003G186800--Sobic006G191500 Sobic001G485100 Sobic001G485100 Sobic003G186800--Sobic001G485100 Sobic010G101000 Sobic010G101000 Sobic003G186800--Sobic010G101000 Sobic004G268400 Sobic004G268400 Sobic003G186800--Sobic004G268400 Sobic003G186800--Sobic002G047400 Sobic004G267700 Sobic004G267700 Sobic003G186800--Sobic004G267700 Sobic007G135800--Sobic001G509200 Sobic003G094100 Sobic003G094100 Sobic007G135800--Sobic003G094100 Sobic007G135800--Sobic001G393300 Sobic001G180200 Sobic001G180200 Sobic007G135800--Sobic001G180200 Sobic004G103300 Sobic004G103300 Sobic007G135800--Sobic004G103300 Sobic007G135800--Sobic006G213700 Sobic007G135800--Sobic007G166300 Sobic007G135800--Sobic003G409700 Sobic007G135800--Sobic003G341300 Sobic002G161400 Sobic002G161400 Sobic006G191500--Sobic002G161400 Sobic006G191500--Sobic003G380200 Sobic006G191500--Sobic001G485100 Sobic006G191500--Sobic003G304300 Sobic006G191500--Sobic004G128900 Sobic004G344600 Sobic004G344600 Sobic006G191500--Sobic004G344600 Sobic006G191500--Sobic003G186800 Sobic010G100900 Sobic010G100900 Sobic006G191500--Sobic010G100900 Sobic001G046000 Sobic001G046000 Sobic006G191500--Sobic001G046000 Sobic007G140700--Sobic003G341300 Sobic002G162400 Sobic002G162400 Sobic007G140700--Sobic002G162400 Sobic002G382700 Sobic002G382700 Sobic007G140700--Sobic002G382700 Sobic009G194500 Sobic009G194500 Sobic007G140700--Sobic009G194500 Sobic010G231300 Sobic010G231300 Sobic007G140700--Sobic010G231300 Sobic001G258200 Sobic001G258200 Sobic007G140700--Sobic001G258200 Sobic001G077300 Sobic001G077300 Sobic007G140700--Sobic001G077300 Sobic007G140700--Sobic003G409700 Sobic001G244600 Sobic001G244600 Sobic007G140700--Sobic001G244600 Sobic003G380200--Sobic006G191500 Sobic003G380200--Sobic003G186800 Sobic003G380200--Sobic010G100900 Sobic003G380200--Sobic003G304300 Sobic003G380200--Sobic004G267700 Sobic003G380200--Sobic001G485100 Sobic007G087100 Sobic007G087100 Sobic003G380200--Sobic007G087100 Sobic003G380200--Sobic002G161400 Sobic003G380200--Sobic004G268400 Sobic008G064500--Sobic006G235350 Sobic009G210200 Sobic009G210200 Sobic008G064500--Sobic009G210200 Sobic008G064500--Sobic006G140500 Sobic003G370000 Sobic003G370000 Sobic008G064500--Sobic003G370000 Sobic002G314300 Sobic002G314300 Sobic008G064500--Sobic002G314300 Sobic008G064500--Sobic001G289500 Sobic008G064500--Sobic003G005000 Sobic004G303200 Sobic004G303200 Sobic008G064500--Sobic004G303200 Sobic008G064500--Sobic002G047400
Octagon: transcription factors


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