Gene annotation
| Transcriptome id | Sobic.009G033200.1,Sobic.009G033200.4,Sobic.009G033200.5,Sobic.009G033200.6 |
|---|---|
| Synonym | GSTL3, Sb09g002800 |
| Functional annotation | IN2-1 protein, putative, expressed |
| UniProt | A0A1B6P6H1 , A0A1B6P694 |
| Pfam | PF13410 PF13417 |
| Panther DB | PTHR11260 PTHR11260:SF222 |
| NCBI CDD | KOG0406; Glutathione S-transferase |
| KEGG Orthology | K00799; GST, glutathione S-transferase |
| Gene Ontology | GO:0005515; protein binding |
Orthologs (automatic annotation)
| TAIR | AT5G02790 : Glutathione S-transferase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os03g17470.1 : IN2-1 protein, putative, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
| Sobic.009G033200 |
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.005G190800 | Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed | K05928: tocopherol O-methyltransferase |
| 2 | Sobic.010G161600 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 3 | Sobic.008G032000 | Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit |
| 4 | Sobic.004G038300 | cycloartenol synthase, putative, expressed | - |
| 5 | Sobic.004G335500 | "P-(S)-hydroxymandelonitrile lyase, up-regulated under drought stress "(PubMedID : 24655390)@OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed | - |
| 6 | Sobic.005G141000 | plant protein of unknown function domain containing protein, expressed | - |
| 7 | Sobic.002G209800 | ZOS9-11 - C2H2 zinc finger protein, expressed | - |
| 8 | Sobic.008G189500 | similar to Secretory acid phosphatase - Pfam Calcineurin-like phosphoesterase(PubMedID : 24655390)@similar to Secretory acid phosphatase - Pfam Calcineurin -like phosphoesterase(PubMedID : 24655390)@Ser/Thr protein phosphatase family protein, putative, expressed | - |
| 9 | Sobic.003G007800 | phosphorylase domain containing protein, putative, expressed | - |
| 10 | Sobic.003G131800 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@major facilitator superfamily antiporter, putative, expressed | - |
| 11 | Sobic.006G060700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@basic proline-rich protein, putative, expressed | - |
| 12 | Sobic.001G472000 | Polyamine oxidase 1("PubMedID : 26759170,PubMedID : 24597475")@amine oxidase, flavin-containing, domain containing protein, expressed | K13366: MPAO, polyamine oxidase |
| 13 | Sobic.001G068600 | app1, putative, expressed | - |
| 14 | Sobic.006G175700 | down-regulated TF in developmental senescence(PubMedID : 27586543)@putative basic helix-loop-helix (bHLH) transcription factor(PubmedID : 24048646)@anthocyanin regulatory Lc protein, putative, expressed | - |
| 15 | Sobic.004G257700 | aspartic proteinase nepenthesin-1 precursor, putative, expressed | - |
| 16 | Sobic.002G121300 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSCP56 - Putative Serine Carboxypeptidase homologue, expressed | K16296: serine carboxypeptidase-like clade I |
| 17 | Sobic.003G287000 | BURP domain containing protein, expressed | - |
| 18 | Sobic.004G296800 | 3-isopropylmalate dehydratase small subunit 2, putative, expressed | K01704: leuD, 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit |
| 19 | Sobic.008G030700 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 20 | Sobic.002G128600 | lecithin:cholesterol acyltransferase, putative, expressed | K06129: lysophospholipase III |
Gene co-expression network
Octagon: transcription factors
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