Gene annotation
Transcriptome id Sobic.008G032000.1
Synonym Sb08g002740, SnRK3.2, CBL-interacting protein kinases, SbCIPK02, CIPK2
Functional annotation Interacting factor of CBLs (PubMedID : 19860013)
CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C4P7T9
Pfam PF14531 PF03822
Panther DB PTHR24347 PTHR24347:SF230
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology K07198; PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
Gene Ontology GO:0007165; signal transduction


Orthologs (automatic annotation)
TAIR AT5G58380 : SOS3-interacting protein 1
RAP-DB (Rice) LOC_Os12g02200.1 : CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a053821 , Zm00025a035815 , Zm00025a058095 , Zm00025a033494 , Zm00025a033298 , Zm00025a057779 , Zm00025a058096 , Zm00025a053831 , Zm00025a053836 , Zm00025a053837 , Zm00025a037607 , Zm00025a057784 , Zm00025a057782 , Zm00025a057783 , Zm00025a057780
Brachypodium KQJ92559 , KQJ92560 , KQJ89464
Barley -
Wheat TraesCS4D02G118500 , TraesCS5D02G144800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G033200 IN2-1 protein, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.006G227000 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
3 Sobic.001G249500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.002G128600 lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
5 Sobic.005G190800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
6 Sobic.010G243000 protein kinase domain containing protein, expressed -
7 Sobic.004G257700 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
8 Sobic.002G209800 ZOS9-11 - C2H2 zinc finger protein, expressed -
9 Sobic.005G141000 plant protein of unknown function domain containing protein, expressed -
10 Sobic.004G038300 cycloartenol synthase, putative, expressed -
11 Sobic.006G161900 expressed protein K08331: autophagy-related protein 13
12 Sobic.007G069500 expressed protein -
13 Sobic.001G249600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.008G030700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.007G195300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
16 Sobic.003G317800 lysM domain containing protein, putative -
17 Sobic.006G175700 down-regulated TF in developmental senescence(PubMedID : 27586543)@putative basic helix-loop-helix (bHLH) transcription factor(PubmedID : 24048646)@anthocyanin regulatory Lc protein, putative, expressed -
18 Sobic.005G218201 - -
19 Sobic.004G249400 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
20 Sobic.007G146350 - -


Gene co-expression network
sample Sobic008G032000 Sobic008G032000 Sobic009G033200 Sobic009G033200 Sobic008G032000--Sobic009G033200 Sobic006G227000 Sobic006G227000 Sobic008G032000--Sobic006G227000 Sobic001G249500 Sobic001G249500 Sobic008G032000--Sobic001G249500 Sobic002G128600 Sobic002G128600 Sobic008G032000--Sobic002G128600 Sobic005G190800 Sobic005G190800 Sobic008G032000--Sobic005G190800 Sobic010G243000 Sobic010G243000 Sobic008G032000--Sobic010G243000 Sobic004G257700 Sobic004G257700 Sobic008G032000--Sobic004G257700 Sobic002G209800 Sobic002G209800 Sobic008G032000--Sobic002G209800 Sobic005G141000 Sobic005G141000 Sobic008G032000--Sobic005G141000 Sobic009G033200--Sobic005G190800 Sobic010G161600 Sobic010G161600 Sobic009G033200--Sobic010G161600 Sobic009G033200--Sobic008G032000 Sobic004G038300 Sobic004G038300 Sobic009G033200--Sobic004G038300 Sobic004G335500 Sobic004G335500 Sobic009G033200--Sobic004G335500 Sobic009G033200--Sobic005G141000 Sobic009G033200--Sobic002G209800 Sobic008G189500 Sobic008G189500 Sobic009G033200--Sobic008G189500 Sobic003G007800 Sobic003G007800 Sobic009G033200--Sobic003G007800 Sobic006G227000--Sobic002G128600 Sobic006G227000--Sobic001G249500 Sobic007G069500 Sobic007G069500 Sobic006G227000--Sobic007G069500 Sobic001G249600 Sobic001G249600 Sobic006G227000--Sobic001G249600 Sobic006G253900 Sobic006G253900 Sobic006G227000--Sobic006G253900 Sobic006G227000--Sobic005G190800 Sobic006G175700 Sobic006G175700 Sobic006G227000--Sobic006G175700 Sobic003G317800 Sobic003G317800 Sobic006G227000--Sobic003G317800 Sobic003G230900 Sobic003G230900 Sobic006G227000--Sobic003G230900 Sobic001G249500--Sobic006G227000 Sobic001G249500--Sobic002G128600 Sobic001G249500--Sobic006G175700 Sobic008G030700 Sobic008G030700 Sobic001G249500--Sobic008G030700 Sobic001G249500--Sobic005G190800 Sobic001G249500--Sobic001G249600 Sobic001G249500--Sobic007G069500 Sobic001G249500--Sobic003G007800 Sobic007G195300 Sobic007G195300 Sobic001G249500--Sobic007G195300 Sobic002G128600--Sobic006G227000 Sobic002G128600--Sobic003G317800 Sobic002G128600--Sobic007G069500 Sobic002G128600--Sobic005G190800 Sobic002G128600--Sobic001G249500 Sobic004G328900 Sobic004G328900 Sobic002G128600--Sobic004G328900 Sobic001G379300 Sobic001G379300 Sobic002G128600--Sobic001G379300 Sobic001G255300 Sobic001G255300 Sobic002G128600--Sobic001G255300 Sobic002G128600--Sobic003G007800 Sobic005G190800--Sobic006G175700 Sobic005G190800--Sobic002G128600 Sobic005G190800--Sobic003G007800 Sobic005G190800--Sobic006G227000 Sobic005G190800--Sobic001G249500 Sobic005G190800--Sobic003G317800 Sobic005G190800--Sobic004G038300 Sobic005G190800--Sobic004G328900 Sobic005G190800--Sobic007G069500 Sobic003G134900 Sobic003G134900 Sobic010G243000--Sobic003G134900 Sobic010G243000--Sobic004G257700 Sobic009G251100 Sobic009G251100 Sobic010G243000--Sobic009G251100 Sobic010G120300 Sobic010G120300 Sobic010G243000--Sobic010G120300 Sobic001G073150 Sobic001G073150 Sobic010G243000--Sobic001G073150 Sobic004G243800 Sobic004G243800 Sobic010G243000--Sobic004G243800 Sobic007G190200 Sobic007G190200 Sobic010G243000--Sobic007G190200 Sobic010G243000--Sobic008G032000 Sobic001G275600 Sobic001G275600 Sobic010G243000--Sobic001G275600 Sobic004G257700--Sobic005G190800 Sobic004G257700--Sobic002G128600 Sobic001G472000 Sobic001G472000 Sobic004G257700--Sobic001G472000 Sobic004G257700--Sobic008G189500 Sobic001G068600 Sobic001G068600 Sobic004G257700--Sobic001G068600 Sobic005G029400 Sobic005G029400 Sobic004G257700--Sobic005G029400 Sobic005G218201 Sobic005G218201 Sobic004G257700--Sobic005G218201 Sobic005G218600 Sobic005G218600 Sobic004G257700--Sobic005G218600 Sobic004G257700--Sobic001G255300 Sobic002G209800--Sobic004G038300 Sobic006G238100 Sobic006G238100 Sobic002G209800--Sobic006G238100 Sobic004G249400 Sobic004G249400 Sobic002G209800--Sobic004G249400 Sobic009G215600 Sobic009G215600 Sobic002G209800--Sobic009G215600 Sobic002G209800--Sobic001G255300 Sobic002G209800--Sobic005G218600 Sobic005G200600 Sobic005G200600 Sobic002G209800--Sobic005G200600 Sobic002G209800--Sobic001G379300 Sobic002G141100 Sobic002G141100 Sobic002G209800--Sobic002G141100 Sobic002G065400 Sobic002G065400 Sobic005G141000--Sobic002G065400 Sobic005G020200 Sobic005G020200 Sobic005G141000--Sobic005G020200 Sobic001G229500 Sobic001G229500 Sobic005G141000--Sobic001G229500 Sobic005G141000--Sobic004G038300 Sobic005G141000--Sobic002G209800 Sobic007G090415 Sobic007G090415 Sobic005G141000--Sobic007G090415 Sobic005G141000--Sobic005G190800 Sobic005G141000--Sobic005G218201 Sobic008G130700 Sobic008G130700 Sobic005G141000--Sobic008G130700
Octagon: transcription factors


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