Gene annotation
Transcriptome id Sobic.004G335500.1
Synonym Sb04g036350, scpl26
Functional annotation "P-(S)-hydroxymandelonitrile lyase, up-regulated under drought stress " (PubMedID : 24655390)
OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed
UniProt P52708 , A0A194YSZ1
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF71
NCBI CDD KOG1282; Serine carboxypeptidases (lysosomal cathepsin A)
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT2G35780 : serine carboxypeptidase-like 26
RAP-DB (Rice) LOC_Os01g06490.1 : OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a029806 , Zm00025a015672 , Zm00025a026989
Brachypodium -
Barley HORVU3Hr1G087470.24 , HORVU3Hr1G087470.25 , HORVU3Hr1G087470.22 , HORVU3Hr1G087470.8 , HORVU3Hr1G087470.10 , HORVU3Hr1G087470.13 , HORVU3Hr1G087470.12 , HORVU3Hr1G087470.16 , HORVU3Hr1G087470.18 , HORVU5Hr1G069410.1 , HORVU5Hr1G069410.3 , HORVU5Hr1G069410.2 , HORVU5Hr1G069410.4 , HORVU1Hr1G018710.2 , HORVU1Hr1G018710.3 , HORVU1Hr1G018710.1 , HORVU1Hr1G018710.4 , HORVU3Hr1G087470.5 , HORVU3Hr1G087470.4 , HORVU3Hr1G087470.7 , HORVU3Hr1G087470.3 , HORVU3Hr1G087470.2
Wheat TraesCS1D02G087700 , TraesCS1D02G087700 , TraesCS3B02G384800 , TraesCS1B02G104500 , TraesCS5A02G244300 , TraesCS1D02G087600 , TraesCS6B02G388600 , TraesCS3A02G352200 , TraesCS1A02G086100 , TraesCS1A02G086100 , TraesCS3D02G346200
Populus -


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cDNA sequences
Sobic.004G335500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G068600 app1, putative, expressed -
2 Sobic.008G189500 similar to Secretory acid phosphatase - Pfam Calcineurin-like phosphoesterase(PubMedID : 24655390)@similar to Secretory acid phosphatase - Pfam Calcineurin -like phosphoesterase(PubMedID : 24655390)@Ser/Thr protein phosphatase family protein, putative, expressed -
3 Sobic.003G007800 phosphorylase domain containing protein, putative, expressed -
4 Sobic.001G472000 Polyamine oxidase 1("PubMedID : 26759170,PubMedID : 24597475")@amine oxidase, flavin-containing, domain containing protein, expressed K13366: MPAO, polyamine oxidase
5 Sobic.001G338000 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
6 Sobic.009G070600 HAD superfamily phosphatase, putative, expressed -
7 Sobic.005G190800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
8 Sobic.006G175700 down-regulated TF in developmental senescence(PubMedID : 27586543)@putative basic helix-loop-helix (bHLH) transcription factor(PubmedID : 24048646)@anthocyanin regulatory Lc protein, putative, expressed -
9 Sobic.001G255300 Protein tyrosine decarboxylase 4 (OS)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
10 Sobic.005G029400 strictosidine synthase, putative, expressed -
11 Sobic.004G038300 cycloartenol synthase, putative, expressed -
12 Sobic.001G363700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
13 Sobic.005G036500 AGC_PVPK_like_kin82y.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
14 Sobic.003G287000 BURP domain containing protein, expressed -
15 Sobic.004G257700 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
16 Sobic.004G328900 expressed protein -
17 Sobic.004G044200 enoyl-CoA hydratase/isomerase family protein, putative, expressed K01661: naphthoate synthase
18 Sobic.003G068300 transferase family protein, putative, expressed -
19 Sobic.002G128600 lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
20 Sobic.005G218600 NBS-LRR disease resistance protein, putative, expressed -


Gene co-expression network
sample Sobic004G335500 Sobic004G335500 Sobic001G068600 Sobic001G068600 Sobic004G335500--Sobic001G068600 Sobic008G189500 Sobic008G189500 Sobic004G335500--Sobic008G189500 Sobic003G007800 Sobic003G007800 Sobic004G335500--Sobic003G007800 Sobic001G472000 Sobic001G472000 Sobic004G335500--Sobic001G472000 Sobic001G338000 Sobic001G338000 Sobic004G335500--Sobic001G338000 Sobic009G070600 Sobic009G070600 Sobic004G335500--Sobic009G070600 Sobic005G190800 Sobic005G190800 Sobic004G335500--Sobic005G190800 Sobic006G175700 Sobic006G175700 Sobic004G335500--Sobic006G175700 Sobic001G255300 Sobic001G255300 Sobic004G335500--Sobic001G255300 Sobic001G068600--Sobic004G335500 Sobic001G068600--Sobic008G189500 Sobic001G068600--Sobic003G007800 Sobic001G068600--Sobic006G175700 Sobic001G363700 Sobic001G363700 Sobic001G068600--Sobic001G363700 Sobic005G029400 Sobic005G029400 Sobic001G068600--Sobic005G029400 Sobic008G030700 Sobic008G030700 Sobic001G068600--Sobic008G030700 Sobic001G068600--Sobic005G190800 Sobic002G128600 Sobic002G128600 Sobic001G068600--Sobic002G128600 Sobic008G189500--Sobic003G007800 Sobic008G189500--Sobic001G472000 Sobic008G189500--Sobic001G255300 Sobic008G189500--Sobic005G029400 Sobic008G189500--Sobic009G070600 Sobic004G328900 Sobic004G328900 Sobic008G189500--Sobic004G328900 Sobic003G317800 Sobic003G317800 Sobic008G189500--Sobic003G317800 Sobic001G379300 Sobic001G379300 Sobic008G189500--Sobic001G379300 Sobic008G189500--Sobic002G128600 Sobic003G007800--Sobic008G189500 Sobic003G007800--Sobic001G255300 Sobic003G007800--Sobic005G190800 Sobic003G007800--Sobic006G175700 Sobic003G007800--Sobic004G328900 Sobic003G007800--Sobic003G317800 Sobic003G007800--Sobic002G128600 Sobic003G007800--Sobic005G029400 Sobic004G038300 Sobic004G038300 Sobic003G007800--Sobic004G038300 Sobic001G472000--Sobic008G189500 Sobic001G472000--Sobic003G007800 Sobic001G472000--Sobic005G029400 Sobic009G161100 Sobic009G161100 Sobic001G472000--Sobic009G161100 Sobic001G472000--Sobic009G070600 Sobic001G472000--Sobic001G255300 Sobic001G315200 Sobic001G315200 Sobic001G472000--Sobic001G315200 Sobic001G541300 Sobic001G541300 Sobic001G472000--Sobic001G541300 Sobic004G249400 Sobic004G249400 Sobic001G472000--Sobic004G249400 Sobic001G332966 Sobic001G332966 Sobic001G338000--Sobic001G332966 Sobic002G278800 Sobic002G278800 Sobic001G338000--Sobic002G278800 Sobic001G338000--Sobic006G175700 Sobic003G006866 Sobic003G006866 Sobic001G338000--Sobic003G006866 Sobic003G173700 Sobic003G173700 Sobic001G338000--Sobic003G173700 Sobic002G278700 Sobic002G278700 Sobic001G338000--Sobic002G278700 Sobic001G338000--Sobic005G190800 Sobic003G131800 Sobic003G131800 Sobic001G338000--Sobic003G131800 Sobic001G338000--Sobic008G030700 Sobic009G070700 Sobic009G070700 Sobic009G070600--Sobic009G070700 Sobic009G070600--Sobic001G255300 Sobic009G070600--Sobic005G029400 Sobic009G070600--Sobic008G189500 Sobic009G070600--Sobic003G007800 Sobic009G070600--Sobic004G328900 Sobic002G207900 Sobic002G207900 Sobic009G070600--Sobic002G207900 Sobic009G070600--Sobic001G472000 Sobic009G070600--Sobic001G379300 Sobic005G190800--Sobic006G175700 Sobic005G190800--Sobic002G128600 Sobic005G190800--Sobic003G007800 Sobic006G227000 Sobic006G227000 Sobic005G190800--Sobic006G227000 Sobic001G249500 Sobic001G249500 Sobic005G190800--Sobic001G249500 Sobic005G190800--Sobic003G317800 Sobic005G190800--Sobic004G038300 Sobic005G190800--Sobic004G328900 Sobic007G069500 Sobic007G069500 Sobic005G190800--Sobic007G069500 Sobic006G175700--Sobic005G190800 Sobic006G175700--Sobic008G030700 Sobic006G175700--Sobic002G278800 Sobic006G175700--Sobic003G007800 Sobic006G175700--Sobic001G249500 Sobic006G175700--Sobic001G338000 Sobic006G175700--Sobic002G128600 Sobic006G175700--Sobic003G131800 Sobic006G175700--Sobic002G278700 Sobic001G255300--Sobic001G379300 Sobic001G255300--Sobic004G328900 Sobic006G238100 Sobic006G238100 Sobic001G255300--Sobic006G238100 Sobic001G255300--Sobic003G317800 Sobic008G163200 Sobic008G163200 Sobic001G255300--Sobic008G163200 Sobic002G416950 Sobic002G416950 Sobic001G255300--Sobic002G416950 Sobic001G255300--Sobic003G007800 Sobic001G255300--Sobic008G189500 Sobic003G068300 Sobic003G068300 Sobic001G255300--Sobic003G068300
Octagon: transcription factors


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