Gene annotation
Transcriptome id Sobic.004G314500.1
Synonym D-CDES, ACD1, Sb04g034640, ATACD1
Functional annotation 1-aminocyclopropane-1-carboxylate deaminase, putative, expressed
UniProt A0A194YSH7
Pfam PF00291
Panther DB PTHR10314 PTHR10314:SF79
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G48420 : D-cysteine desulfhydrase
RAP-DB (Rice) LOC_Os02g53330.2 : 1-aminocyclopropane-1-carboxylate deaminase, putative, expressed
MaizeGDB (Corn) Zm00025a008810 , Zm00025a022282
Brachypodium KQK01684
Barley HORVU6Hr1G079140.11 , HORVU6Hr1G079140.10 , HORVU6Hr1G079140.8 , HORVU6Hr1G079140.1 , HORVU6Hr1G079140.3 , HORVU6Hr1G079140.2 , HORVU6Hr1G079140.5 , HORVU6Hr1G079140.4 , HORVU6Hr1G079140.7 , HORVU6Hr1G079140.6 , HORVU6Hr1G079140.9
Wheat TraesCS6B02G354300 , TraesCS6A02G323700 , TraesCS6D02G303500 , TraesCS6D02G303500 , TraesCS3A02G119300
Populus -


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cDNA sequences
Sobic.004G314500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G067300 histidinol dehydrogenase, chloroplast precursor, putative, expressed K00013: histidinol dehydrogenase
2 Sobic.009G124000 mesophyll envelope protein(PubMedID : 26976818)@expressed protein -
3 Sobic.001G380500 appr-1-p processing enzyme family protein, putative, expressed -
4 Sobic.009G029700 aminotransferase, putative, expressed K00818: E2.6.1.11, acetylornithine aminotransferase
5 Sobic.009G093200 superoxide dismutase, mitochondrial precursor, putative, expressed K04564: superoxide dismutase, Fe-Mn family
6 Sobic.005G140500 peptidase, M24 family protein, putative, expressed K01262: Xaa-Pro aminopeptidase
7 Sobic.003G309300 radical SAM enzyme, putative, expressed K03644: lipA, LIAS, LIP1, lipoyl synthase
8 Sobic.002G301200 OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed K16298: serine carboxypeptidase-like clade IV
9 Sobic.001G486700 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
10 Sobic.004G002200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
11 Sobic.004G268100 ornithine carbamoyltransferase, putative, expressed K00611: OTC, argF, ornithine carbamoyltransferase
12 Sobic.003G244200 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
13 Sobic.005G004100 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
14 Sobic.004G275600 hydrolase, putative, expressed K01438: acetylornithine deacetylase
15 Sobic.009G256000 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
16 Sobic.003G219100 expressed protein -
17 Sobic.007G209800 3-oxoacyl-reductase, chloroplast precursor, putative, expressed -
18 Sobic.002G039000 ML domain protein, putative, expressed -
19 Sobic.001G401700 aminotransferase, classes I and II, domain containing protein, expressed K10206: LL-diaminopimelate aminotransferase
20 Sobic.010G216300 dihydrodipicolinate synthase, chloroplast precursor, putative, expressed K01714: 4-hydroxy-tetrahydrodipicolinate synthase


Gene co-expression network
sample Sobic004G314500 Sobic004G314500 Sobic001G067300 Sobic001G067300 Sobic004G314500--Sobic001G067300 Sobic009G124000 Sobic009G124000 Sobic004G314500--Sobic009G124000 Sobic001G380500 Sobic001G380500 Sobic004G314500--Sobic001G380500 Sobic009G029700 Sobic009G029700 Sobic004G314500--Sobic009G029700 Sobic009G093200 Sobic009G093200 Sobic004G314500--Sobic009G093200 Sobic005G140500 Sobic005G140500 Sobic004G314500--Sobic005G140500 Sobic003G309300 Sobic003G309300 Sobic004G314500--Sobic003G309300 Sobic002G301200 Sobic002G301200 Sobic004G314500--Sobic002G301200 Sobic001G486700 Sobic001G486700 Sobic004G314500--Sobic001G486700 Sobic001G067300--Sobic004G314500 Sobic001G096300 Sobic001G096300 Sobic001G067300--Sobic001G096300 Sobic001G067300--Sobic009G124000 Sobic004G265900 Sobic004G265900 Sobic001G067300--Sobic004G265900 Sobic001G067300--Sobic001G380500 Sobic006G238700 Sobic006G238700 Sobic001G067300--Sobic006G238700 Sobic001G067300--Sobic001G486700 Sobic006G244700 Sobic006G244700 Sobic001G067300--Sobic006G244700 Sobic002G116900 Sobic002G116900 Sobic001G067300--Sobic002G116900 Sobic009G124000--Sobic001G486700 Sobic008G183700 Sobic008G183700 Sobic009G124000--Sobic008G183700 Sobic001G376700 Sobic001G376700 Sobic009G124000--Sobic001G376700 Sobic004G275600 Sobic004G275600 Sobic009G124000--Sobic004G275600 Sobic001G401700 Sobic001G401700 Sobic009G124000--Sobic001G401700 Sobic007G208300 Sobic007G208300 Sobic009G124000--Sobic007G208300 Sobic003G292300 Sobic003G292300 Sobic009G124000--Sobic003G292300 Sobic002G244500 Sobic002G244500 Sobic009G124000--Sobic002G244500 Sobic010G221600 Sobic010G221600 Sobic009G124000--Sobic010G221600 Sobic001G380500--Sobic009G029700 Sobic010G108900 Sobic010G108900 Sobic001G380500--Sobic010G108900 Sobic007G168200 Sobic007G168200 Sobic001G380500--Sobic007G168200 Sobic007G029100 Sobic007G029100 Sobic001G380500--Sobic007G029100 Sobic001G218800 Sobic001G218800 Sobic001G380500--Sobic001G218800 Sobic002G039000 Sobic002G039000 Sobic001G380500--Sobic002G039000 Sobic006G168400 Sobic006G168400 Sobic001G380500--Sobic006G168400 Sobic001G418800 Sobic001G418800 Sobic001G380500--Sobic001G418800 Sobic002G404200 Sobic002G404200 Sobic001G380500--Sobic002G404200 Sobic009G029700--Sobic001G380500 Sobic004G268100 Sobic004G268100 Sobic009G029700--Sobic004G268100 Sobic009G029700--Sobic007G029100 Sobic004G117800 Sobic004G117800 Sobic009G029700--Sobic004G117800 Sobic001G437200 Sobic001G437200 Sobic009G029700--Sobic001G437200 Sobic009G029700--Sobic002G039000 Sobic003G310100 Sobic003G310100 Sobic009G029700--Sobic003G310100 Sobic002G281800 Sobic002G281800 Sobic009G029700--Sobic002G281800 Sobic001G202500 Sobic001G202500 Sobic009G029700--Sobic001G202500 Sobic003G428200 Sobic003G428200 Sobic009G093200--Sobic003G428200 Sobic003G244200 Sobic003G244200 Sobic009G093200--Sobic003G244200 Sobic006G203100 Sobic006G203100 Sobic009G093200--Sobic006G203100 Sobic010G044200 Sobic010G044200 Sobic009G093200--Sobic010G044200 Sobic010G073100 Sobic010G073100 Sobic009G093200--Sobic010G073100 Sobic002G423800 Sobic002G423800 Sobic009G093200--Sobic002G423800 Sobic001G338400 Sobic001G338400 Sobic009G093200--Sobic001G338400 Sobic006G211800 Sobic006G211800 Sobic009G093200--Sobic006G211800 Sobic001G478000 Sobic001G478000 Sobic009G093200--Sobic001G478000 Sobic004G262700 Sobic004G262700 Sobic005G140500--Sobic004G262700 Sobic010G100800 Sobic010G100800 Sobic005G140500--Sobic010G100800 Sobic002G428800 Sobic002G428800 Sobic005G140500--Sobic002G428800 Sobic010G013300 Sobic010G013300 Sobic005G140500--Sobic010G013300 Sobic005G140500--Sobic006G238700 Sobic003G194100 Sobic003G194100 Sobic005G140500--Sobic003G194100 Sobic006G280000 Sobic006G280000 Sobic005G140500--Sobic006G280000 Sobic001G396000 Sobic001G396000 Sobic005G140500--Sobic001G396000 Sobic007G029500 Sobic007G029500 Sobic005G140500--Sobic007G029500 Sobic003G309300--Sobic004G275600 Sobic006G157000 Sobic006G157000 Sobic003G309300--Sobic006G157000 Sobic003G165101 Sobic003G165101 Sobic003G309300--Sobic003G165101 Sobic007G071900 Sobic007G071900 Sobic003G309300--Sobic007G071900 Sobic008G038600 Sobic008G038600 Sobic003G309300--Sobic008G038600 Sobic006G237000 Sobic006G237000 Sobic003G309300--Sobic006G237000 Sobic003G309300--Sobic009G124000 Sobic001G537500 Sobic001G537500 Sobic003G309300--Sobic001G537500 Sobic010G216300 Sobic010G216300 Sobic003G309300--Sobic010G216300 Sobic005G004100 Sobic005G004100 Sobic002G301200--Sobic005G004100 Sobic002G301200--Sobic001G486700 Sobic003G420900 Sobic003G420900 Sobic002G301200--Sobic003G420900 Sobic002G321400 Sobic002G321400 Sobic002G301200--Sobic002G321400 Sobic002G301200--Sobic004G275600 Sobic009G256000 Sobic009G256000 Sobic002G301200--Sobic009G256000 Sobic007G130800 Sobic007G130800 Sobic002G301200--Sobic007G130800 Sobic002G301200--Sobic004G314500 Sobic010G059200 Sobic010G059200 Sobic002G301200--Sobic010G059200 Sobic001G486700--Sobic009G124000 Sobic001G462200 Sobic001G462200 Sobic001G486700--Sobic001G462200 Sobic004G018000 Sobic004G018000 Sobic001G486700--Sobic004G018000 Sobic003G378400 Sobic003G378400 Sobic001G486700--Sobic003G378400 Sobic001G486700--Sobic002G301200 Sobic001G486700--Sobic004G275600 Sobic001G468600 Sobic001G468600 Sobic001G486700--Sobic001G468600 Sobic009G072000 Sobic009G072000 Sobic001G486700--Sobic009G072000 Sobic009G045900 Sobic009G045900 Sobic001G486700--Sobic009G045900
Octagon: transcription factors


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