Gene annotation
Transcriptome id Sobic.003G219100.2
Synonym Sb03g027790
Functional annotation expressed protein
UniProt A0A1W0VYG2
Pfam PF09585
Panther DB PTHR34784
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G29040 : -
RAP-DB (Rice) LOC_Os01g42770.1 : expressed protein
MaizeGDB (Corn) Zm00025a028710
Brachypodium -
Barley HORVU3Hr1G053860.2 , HORVU3Hr1G053860.1
Wheat TraesCS3A02G220000 , TraesCS3B02G250400 , TraesCS3D02G232600 , TraesCS3A02G220000
Populus -


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cDNA sequences
Sobic.003G219100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G093200 superoxide dismutase, mitochondrial precursor, putative, expressed K04564: superoxide dismutase, Fe-Mn family
2 Sobic.004G314500 1-aminocyclopropane-1-carboxylate deaminase, putative, expressed -
3 Sobic.001G408100 Yip1 domain containing protein, expressed -
4 Sobic.008G083400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@argininosuccinate synthase, chloroplast precursor, putative, expressed K01940: argG, argininosuccinate synthase
5 Sobic.003G092700 xylosyltransferase, putative, expressed -
6 Sobic.004G283400 RING-H2 finger protein, putative, expressed -
7 Sobic.003G052400 proline-rich family protein, putative, expressed -
8 Sobic.004G249300 proteasome subunit, putative, expressed K15030: translation initiation factor 3 subunit M
9 Sobic.005G090900 phosphoribosylamine--glycine ligase, putative, expressed K01945: phosphoribosylamine---glycine ligase
10 Sobic.010G038700 expressed protein -
11 Sobic.001G380500 appr-1-p processing enzyme family protein, putative, expressed -
12 Sobic.001G147100 pre-rRNA-processing protein TSR2, putative, expressed K14800: pre-rRNA-processing protein TSR2
13 Sobic.006G203100 expressed protein -
14 Sobic.009G029700 aminotransferase, putative, expressed K00818: E2.6.1.11, acetylornithine aminotransferase
15 Sobic.008G118500 tRNA synthetase, putative, expressed K01867: WARS, tryptophanyl-tRNA synthetase
16 Sobic.006G126200 alveolar soft part sarcoma chromosome region, candidate 1, putative, expressed K15627: ASPSCR1, tether containing UBX domain for GLUT4
17 Sobic.006G168400 ethylene-responsive element-binding protein, putative, expressed -
18 Sobic.010G088300 serine/threonine-protein phosphatase 2A activator 2, putative, expressed K17605: PPP2R4, serine/threonine-protein phosphatase 2A activator
19 Sobic.001G544100 peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative, expressed -
20 Sobic.007G225300 2-nitropropane dioxygenase family, putative, expressed -


Gene co-expression network
sample Sobic003G219100 Sobic003G219100 Sobic009G093200 Sobic009G093200 Sobic003G219100--Sobic009G093200 Sobic004G314500 Sobic004G314500 Sobic003G219100--Sobic004G314500 Sobic001G408100 Sobic001G408100 Sobic003G219100--Sobic001G408100 Sobic008G083400 Sobic008G083400 Sobic003G219100--Sobic008G083400 Sobic003G092700 Sobic003G092700 Sobic003G219100--Sobic003G092700 Sobic004G283400 Sobic004G283400 Sobic003G219100--Sobic004G283400 Sobic003G052400 Sobic003G052400 Sobic003G219100--Sobic003G052400 Sobic004G249300 Sobic004G249300 Sobic003G219100--Sobic004G249300 Sobic005G090900 Sobic005G090900 Sobic003G219100--Sobic005G090900 Sobic003G428200 Sobic003G428200 Sobic009G093200--Sobic003G428200 Sobic003G244200 Sobic003G244200 Sobic009G093200--Sobic003G244200 Sobic006G203100 Sobic006G203100 Sobic009G093200--Sobic006G203100 Sobic010G044200 Sobic010G044200 Sobic009G093200--Sobic010G044200 Sobic010G073100 Sobic010G073100 Sobic009G093200--Sobic010G073100 Sobic002G423800 Sobic002G423800 Sobic009G093200--Sobic002G423800 Sobic001G338400 Sobic001G338400 Sobic009G093200--Sobic001G338400 Sobic006G211800 Sobic006G211800 Sobic009G093200--Sobic006G211800 Sobic001G478000 Sobic001G478000 Sobic009G093200--Sobic001G478000 Sobic001G067300 Sobic001G067300 Sobic004G314500--Sobic001G067300 Sobic009G124000 Sobic009G124000 Sobic004G314500--Sobic009G124000 Sobic001G380500 Sobic001G380500 Sobic004G314500--Sobic001G380500 Sobic009G029700 Sobic009G029700 Sobic004G314500--Sobic009G029700 Sobic004G314500--Sobic009G093200 Sobic005G140500 Sobic005G140500 Sobic004G314500--Sobic005G140500 Sobic003G309300 Sobic003G309300 Sobic004G314500--Sobic003G309300 Sobic002G301200 Sobic002G301200 Sobic004G314500--Sobic002G301200 Sobic001G486700 Sobic001G486700 Sobic004G314500--Sobic001G486700 Sobic003G217100 Sobic003G217100 Sobic001G408100--Sobic003G217100 Sobic001G408100--Sobic003G052400 Sobic009G171100 Sobic009G171100 Sobic001G408100--Sobic009G171100 Sobic010G017000 Sobic010G017000 Sobic001G408100--Sobic010G017000 Sobic003G043400 Sobic003G043400 Sobic001G408100--Sobic003G043400 Sobic006G222400 Sobic006G222400 Sobic001G408100--Sobic006G222400 Sobic001G214200 Sobic001G214200 Sobic001G408100--Sobic001G214200 Sobic004G025300 Sobic004G025300 Sobic001G408100--Sobic004G025300 Sobic003G038600 Sobic003G038600 Sobic001G408100--Sobic003G038600 Sobic006G251600 Sobic006G251600 Sobic008G083400--Sobic006G251600 Sobic001G432300 Sobic001G432300 Sobic008G083400--Sobic001G432300 Sobic001G371100 Sobic001G371100 Sobic008G083400--Sobic001G371100 Sobic008G083400--Sobic004G249300 Sobic009G081500 Sobic009G081500 Sobic008G083400--Sobic009G081500 Sobic002G110400 Sobic002G110400 Sobic008G083400--Sobic002G110400 Sobic007G171200 Sobic007G171200 Sobic008G083400--Sobic007G171200 Sobic001G008500 Sobic001G008500 Sobic008G083400--Sobic001G008500 Sobic003G407800 Sobic003G407800 Sobic008G083400--Sobic003G407800 Sobic003G319000 Sobic003G319000 Sobic003G092700--Sobic003G319000 Sobic003G312400 Sobic003G312400 Sobic003G092700--Sobic003G312400 Sobic002G141700 Sobic002G141700 Sobic003G092700--Sobic002G141700 Sobic001G145500 Sobic001G145500 Sobic003G092700--Sobic001G145500 Sobic001G542900 Sobic001G542900 Sobic003G092700--Sobic001G542900 Sobic004G083000 Sobic004G083000 Sobic003G092700--Sobic004G083000 Sobic006G252200 Sobic006G252200 Sobic003G092700--Sobic006G252200 Sobic010G088300 Sobic010G088300 Sobic003G092700--Sobic010G088300 Sobic002G194800 Sobic002G194800 Sobic003G092700--Sobic002G194800 Sobic001G109100 Sobic001G109100 Sobic004G283400--Sobic001G109100 Sobic010G118100 Sobic010G118100 Sobic004G283400--Sobic010G118100 Sobic004G283400--Sobic003G219100 Sobic004G253900 Sobic004G253900 Sobic004G283400--Sobic004G253900 Sobic007G196400 Sobic007G196400 Sobic004G283400--Sobic007G196400 Sobic001G363300 Sobic001G363300 Sobic004G283400--Sobic001G363300 Sobic001G161200 Sobic001G161200 Sobic004G283400--Sobic001G161200 Sobic001G095750 Sobic001G095750 Sobic004G283400--Sobic001G095750 Sobic001G045000 Sobic001G045000 Sobic004G283400--Sobic001G045000 Sobic003G052400--Sobic010G017000 Sobic003G052400--Sobic001G408100 Sobic002G348600 Sobic002G348600 Sobic003G052400--Sobic002G348600 Sobic001G067900 Sobic001G067900 Sobic003G052400--Sobic001G067900 Sobic008G003600 Sobic008G003600 Sobic003G052400--Sobic008G003600 Sobic003G052400--Sobic003G217100 Sobic009G160200 Sobic009G160200 Sobic003G052400--Sobic009G160200 Sobic006G257001 Sobic006G257001 Sobic003G052400--Sobic006G257001 Sobic001G237500 Sobic001G237500 Sobic003G052400--Sobic001G237500 Sobic002G341800 Sobic002G341800 Sobic004G249300--Sobic002G341800 Sobic009G201800 Sobic009G201800 Sobic004G249300--Sobic009G201800 Sobic001G115500 Sobic001G115500 Sobic004G249300--Sobic001G115500 Sobic002G077900 Sobic002G077900 Sobic004G249300--Sobic002G077900 Sobic004G249300--Sobic008G083400 Sobic010G247400 Sobic010G247400 Sobic004G249300--Sobic010G247400 Sobic003G118400 Sobic003G118400 Sobic004G249300--Sobic003G118400 Sobic009G102900 Sobic009G102900 Sobic004G249300--Sobic009G102900 Sobic001G370300 Sobic001G370300 Sobic004G249300--Sobic001G370300 Sobic002G014400 Sobic002G014400 Sobic005G090900--Sobic002G014400 Sobic004G252000 Sobic004G252000 Sobic005G090900--Sobic004G252000 Sobic009G235000 Sobic009G235000 Sobic005G090900--Sobic009G235000 Sobic005G090900--Sobic002G341800 Sobic006G135900 Sobic006G135900 Sobic005G090900--Sobic006G135900 Sobic003G130600 Sobic003G130600 Sobic005G090900--Sobic003G130600 Sobic005G090900--Sobic001G432300 Sobic004G326600 Sobic004G326600 Sobic005G090900--Sobic004G326600 Sobic001G091900 Sobic001G091900 Sobic005G090900--Sobic001G091900
Octagon: transcription factors


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