Gene annotation
Transcriptome id Sobic.006G168400.1
Synonym Sb06g024410
Functional annotation ethylene-responsive element-binding protein, putative, expressed
UniProt C5YDF2
Pfam PF05903
Panther DB PTHR12378 PTHR12378:SF14
NCBI CDD KOG0324; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47310 : PPPDE putative thiol peptidase family protein
RAP-DB (Rice) LOC_Os04g46290.1 : ethylene-responsive element-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a056884 , Zm00025a010566 , Zm00025a010329
Brachypodium KQK00591 , KQK00590 , KQJ83911
Barley HORVU0Hr1G009550.4 , HORVU0Hr1G009550.3 , HORVU2Hr1G098080.4 , HORVU2Hr1G098080.6 , HORVU2Hr1G098080.1 , HORVU2Hr1G098080.3 , HORVU2Hr1G098080.2 , HORVU2Hr1G098080.5 , HORVU0Hr1G009550.5 , HORVU0Hr1G009550.1
Wheat TraesCS2B02G435700 , TraesCS2B02G435700 , TraesCS6D02G225900 , TraesCS6D02G225900 , TraesCS5A02G543200 , TraesCS5A02G543200 , TraesCS4B02G376300 , TraesCS6B02G280600 , TraesCS2D02G413700 , TraesCS6A02G243700 , TraesCS6A02G243700 , TraesCS2A02G416700 , TraesCS4B02G376300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G108900 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
2 Sobic.001G380500 appr-1-p processing enzyme family protein, putative, expressed -
3 Sobic.002G262000 ankyrin repeat domain containing protein, putative, expressed -
4 Sobic.002G333100 transmembrane protein, putative, expressed -
5 Sobic.003G004700 SOUL heme-binding protein, putative, expressed -
6 Sobic.006G183000 RING zinc finger protein, putative, expressed -
7 Sobic.001G463500 FAD-linked sulfhydryl oxidase ALR, putative, expressed K17783: ERV1, GFER, mitochondrial FAD-linked sulfhydryl oxidase
8 Sobic.006G109700 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
9 Sobic.001G218800 expressed protein -
10 Sobic.010G024100 tRNA 2-phosphotransferase 1, putative, expressed K10669: TRPT1, 2'-phosphotransferase
11 Sobic.007G171950 - -
12 Sobic.004G260400 expressed protein K07018: uncharacterized protein
13 Sobic.009G130400 DNA-directed RNA polymerase II subunit RPB7, putative, expressed K03015: RPB7, DNA-directed RNA polymerase II subunit RPB7
14 Sobic.006G216000 DAG protein, chloroplast precursor, putative, expressed -
15 Sobic.007G168200 peptidyl-prolyl cis-trans isomerase, putative, expressed K12733: peptidyl-prolyl cis-trans isomerase-like 1
16 Sobic.001G072800 expressed protein -
17 Sobic.004G124100 EMB1303, putative, expressed -
18 Sobic.004G212500 expressed protein K00550: phosphatidyl-N-methylethanolamine N-methyltransferase
19 Sobic.003G190500 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
20 Sobic.001G469200 proteasome subunit, putative, expressed K12178: COPS4, COP9 signalosome complex subunit 4


Gene co-expression network
sample Sobic006G168400 Sobic006G168400 Sobic010G108900 Sobic010G108900 Sobic006G168400--Sobic010G108900 Sobic001G380500 Sobic001G380500 Sobic006G168400--Sobic001G380500 Sobic002G262000 Sobic002G262000 Sobic006G168400--Sobic002G262000 Sobic002G333100 Sobic002G333100 Sobic006G168400--Sobic002G333100 Sobic003G004700 Sobic003G004700 Sobic006G168400--Sobic003G004700 Sobic006G183000 Sobic006G183000 Sobic006G168400--Sobic006G183000 Sobic001G463500 Sobic001G463500 Sobic006G168400--Sobic001G463500 Sobic006G109700 Sobic006G109700 Sobic006G168400--Sobic006G109700 Sobic001G218800 Sobic001G218800 Sobic006G168400--Sobic001G218800 Sobic010G108900--Sobic001G380500 Sobic010G108900--Sobic001G218800 Sobic010G108900--Sobic006G168400 Sobic010G108900--Sobic003G004700 Sobic010G108900--Sobic006G183000 Sobic001G469200 Sobic001G469200 Sobic010G108900--Sobic001G469200 Sobic010G108900--Sobic002G262000 Sobic009G108500 Sobic009G108500 Sobic010G108900--Sobic009G108500 Sobic010G108900--Sobic006G109700 Sobic009G029700 Sobic009G029700 Sobic001G380500--Sobic009G029700 Sobic001G380500--Sobic010G108900 Sobic007G168200 Sobic007G168200 Sobic001G380500--Sobic007G168200 Sobic007G029100 Sobic007G029100 Sobic001G380500--Sobic007G029100 Sobic001G380500--Sobic001G218800 Sobic002G039000 Sobic002G039000 Sobic001G380500--Sobic002G039000 Sobic001G380500--Sobic006G168400 Sobic001G418800 Sobic001G418800 Sobic001G380500--Sobic001G418800 Sobic002G404200 Sobic002G404200 Sobic001G380500--Sobic002G404200 Sobic004G356900 Sobic004G356900 Sobic002G262000--Sobic004G356900 Sobic002G071000 Sobic002G071000 Sobic002G262000--Sobic002G071000 Sobic003G117300 Sobic003G117300 Sobic002G262000--Sobic003G117300 Sobic002G262000--Sobic010G108900 Sobic006G049700 Sobic006G049700 Sobic002G262000--Sobic006G049700 Sobic001G234200 Sobic001G234200 Sobic002G262000--Sobic001G234200 Sobic002G262000--Sobic006G183000 Sobic004G232800 Sobic004G232800 Sobic002G262000--Sobic004G232800 Sobic004G348900 Sobic004G348900 Sobic002G262000--Sobic004G348900 Sobic003G420900 Sobic003G420900 Sobic002G333100--Sobic003G420900 Sobic002G333100--Sobic010G108900 Sobic002G333100--Sobic006G168400 Sobic002G244500 Sobic002G244500 Sobic002G333100--Sobic002G244500 Sobic001G376700 Sobic001G376700 Sobic002G333100--Sobic001G376700 Sobic004G296800 Sobic004G296800 Sobic002G333100--Sobic004G296800 Sobic003G265500 Sobic003G265500 Sobic002G333100--Sobic003G265500 Sobic009G124000 Sobic009G124000 Sobic002G333100--Sobic009G124000 Sobic002G333100--Sobic001G463500 Sobic003G004700--Sobic001G218800 Sobic003G004700--Sobic010G108900 Sobic010G176500 Sobic010G176500 Sobic003G004700--Sobic010G176500 Sobic003G004700--Sobic001G380500 Sobic003G004700--Sobic009G108500 Sobic003G004700--Sobic006G109700 Sobic003G004700--Sobic002G039000 Sobic001G263000 Sobic001G263000 Sobic003G004700--Sobic001G263000 Sobic006G087100 Sobic006G087100 Sobic003G004700--Sobic006G087100 Sobic002G129000 Sobic002G129000 Sobic006G183000--Sobic002G129000 Sobic001G294900 Sobic001G294900 Sobic006G183000--Sobic001G294900 Sobic009G033900 Sobic009G033900 Sobic006G183000--Sobic009G033900 Sobic006G183000--Sobic006G109700 Sobic002G268400 Sobic002G268400 Sobic006G183000--Sobic002G268400 Sobic001G136900 Sobic001G136900 Sobic006G183000--Sobic001G136900 Sobic009G050700 Sobic009G050700 Sobic006G183000--Sobic009G050700 Sobic003G405700 Sobic003G405700 Sobic006G183000--Sobic003G405700 Sobic006G094600 Sobic006G094600 Sobic006G183000--Sobic006G094600 Sobic001G463500--Sobic004G296800 Sobic008G135701 Sobic008G135701 Sobic001G463500--Sobic008G135701 Sobic002G330500 Sobic002G330500 Sobic001G463500--Sobic002G330500 Sobic001G008700 Sobic001G008700 Sobic001G463500--Sobic001G008700 Sobic001G463500--Sobic003G420900 Sobic001G543700 Sobic001G543700 Sobic001G463500--Sobic001G543700 Sobic001G011300 Sobic001G011300 Sobic001G463500--Sobic001G011300 Sobic002G253100 Sobic002G253100 Sobic001G463500--Sobic002G253100 Sobic001G463500--Sobic002G333100 Sobic008G137600 Sobic008G137600 Sobic006G109700--Sobic008G137600 Sobic001G444300 Sobic001G444300 Sobic006G109700--Sobic001G444300 Sobic006G109700--Sobic006G183000 Sobic006G109700--Sobic001G294900 Sobic009G168000 Sobic009G168000 Sobic006G109700--Sobic009G168000 Sobic006G211800 Sobic006G211800 Sobic006G109700--Sobic006G211800 Sobic006G231500 Sobic006G231500 Sobic006G109700--Sobic006G231500 Sobic006G109700--Sobic004G348900 Sobic001G502200 Sobic001G502200 Sobic006G109700--Sobic001G502200 Sobic001G218800--Sobic010G108900 Sobic001G218800--Sobic003G004700 Sobic001G218800--Sobic010G176500 Sobic003G123000 Sobic003G123000 Sobic001G218800--Sobic003G123000 Sobic010G000300 Sobic010G000300 Sobic001G218800--Sobic010G000300 Sobic001G218800--Sobic001G380500 Sobic001G218800--Sobic006G087100 Sobic006G233300 Sobic006G233300 Sobic001G218800--Sobic006G233300 Sobic001G218800--Sobic009G108500
Octagon: transcription factors


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