Gene annotation
Transcriptome id Sobic.001G072800.2,Sobic.001G072800.1
Synonym Sb01g006550
Functional annotation expressed protein
UniProt A0A1Z5S597 , C5WZ52
Pfam PF01883
Panther DB PTHR12377 PTHR12377:SF3
NCBI CDD KOG3381; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50845 : Protein of unknown function (DUF59)
RAP-DB (Rice) LOC_Os03g56410.2 : expressed protein
MaizeGDB (Corn) Zm00025a008383
Brachypodium KQK12963
Barley HORVU5Hr1G099070.5 , HORVU5Hr1G099070.1 , HORVU5Hr1G099070.2
Wheat TraesCS5D02G418800 , TraesCS5A02G409000 , TraesCS5B02G413700
Populus -


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cDNA sequences
Sobic.001G072800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G269000 protein kinase, putative, expressed -
2 Sobic.008G118900 OsAPRL6 adenosine 5\'-phosphosulfate reductase-like OsAPRL6, expressed -
3 Sobic.001G004700 expressed protein -
4 Sobic.006G168400 ethylene-responsive element-binding protein, putative, expressed -
5 Sobic.004G083300 OsFBL7 - F-box domain and LRR containing protein, expressed K14515: EIN3-binding F-box protein
6 Sobic.003G075000 expressed protein -
7 Sobic.007G213300 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
8 Sobic.003G291400 dehydrogenase, putative, expressed -
9 Sobic.007G171950 - -
10 Sobic.006G004600 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
11 Sobic.004G202700 expressed protein K10268: F-box and leucine-rich repeat protein 2/20
12 Sobic.006G220800 -(PubMedID : 26976818)@aminomethyltransferase, putative, expressed K00605: gcvT, aminomethyltransferase
13 Sobic.003G440800 vacuolar protein sorting 55 family protein, putative, expressed -
14 Sobic.010G037300 OsMKK1 - putative MAPKK based on amino acid sequence homology, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
15 Sobic.009G207100 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
16 Sobic.004G028000 expressed protein -
17 Sobic.010G108900 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
18 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
19 Sobic.005G033200 expressed protein -
20 Sobic.001G024500 uncharacterized Cys-rich domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G072800 Sobic001G072800 Sobic006G269000 Sobic006G269000 Sobic001G072800--Sobic006G269000 Sobic008G118900 Sobic008G118900 Sobic001G072800--Sobic008G118900 Sobic001G004700 Sobic001G004700 Sobic001G072800--Sobic001G004700 Sobic006G168400 Sobic006G168400 Sobic001G072800--Sobic006G168400 Sobic004G083300 Sobic004G083300 Sobic001G072800--Sobic004G083300 Sobic003G075000 Sobic003G075000 Sobic001G072800--Sobic003G075000 Sobic007G213300 Sobic007G213300 Sobic001G072800--Sobic007G213300 Sobic003G291400 Sobic003G291400 Sobic001G072800--Sobic003G291400 Sobic007G171950 Sobic007G171950 Sobic001G072800--Sobic007G171950 Sobic002G137300 Sobic002G137300 Sobic006G269000--Sobic002G137300 Sobic006G004600 Sobic006G004600 Sobic006G269000--Sobic006G004600 Sobic004G214100 Sobic004G214100 Sobic006G269000--Sobic004G214100 Sobic006G269000--Sobic001G072800 Sobic003G261900 Sobic003G261900 Sobic006G269000--Sobic003G261900 Sobic007G168200 Sobic007G168200 Sobic006G269000--Sobic007G168200 Sobic002G242200 Sobic002G242200 Sobic006G269000--Sobic002G242200 Sobic009G190800 Sobic009G190800 Sobic006G269000--Sobic009G190800 Sobic001G417900 Sobic001G417900 Sobic006G269000--Sobic001G417900 Sobic005G033200 Sobic005G033200 Sobic008G118900--Sobic005G033200 Sobic002G111200 Sobic002G111200 Sobic008G118900--Sobic002G111200 Sobic002G071000 Sobic002G071000 Sobic008G118900--Sobic002G071000 Sobic008G076800 Sobic008G076800 Sobic008G118900--Sobic008G076800 Sobic009G004600 Sobic009G004600 Sobic008G118900--Sobic009G004600 Sobic010G265300 Sobic010G265300 Sobic008G118900--Sobic010G265300 Sobic008G118900--Sobic001G417900 Sobic001G234200 Sobic001G234200 Sobic008G118900--Sobic001G234200 Sobic009G243100 Sobic009G243100 Sobic008G118900--Sobic009G243100 Sobic002G122600 Sobic002G122600 Sobic001G004700--Sobic002G122600 Sobic003G078800 Sobic003G078800 Sobic001G004700--Sobic003G078800 Sobic004G227300 Sobic004G227300 Sobic001G004700--Sobic004G227300 Sobic006G171700 Sobic006G171700 Sobic001G004700--Sobic006G171700 Sobic001G380500 Sobic001G380500 Sobic001G004700--Sobic001G380500 Sobic003G299000 Sobic003G299000 Sobic001G004700--Sobic003G299000 Sobic006G119800 Sobic006G119800 Sobic001G004700--Sobic006G119800 Sobic001G004700--Sobic006G004600 Sobic001G004700--Sobic007G171950 Sobic010G108900 Sobic010G108900 Sobic006G168400--Sobic010G108900 Sobic006G168400--Sobic001G380500 Sobic002G262000 Sobic002G262000 Sobic006G168400--Sobic002G262000 Sobic002G333100 Sobic002G333100 Sobic006G168400--Sobic002G333100 Sobic003G004700 Sobic003G004700 Sobic006G168400--Sobic003G004700 Sobic006G183000 Sobic006G183000 Sobic006G168400--Sobic006G183000 Sobic001G463500 Sobic001G463500 Sobic006G168400--Sobic001G463500 Sobic006G109700 Sobic006G109700 Sobic006G168400--Sobic006G109700 Sobic001G218800 Sobic001G218800 Sobic006G168400--Sobic001G218800 Sobic010G135000 Sobic010G135000 Sobic004G083300--Sobic010G135000 Sobic002G134001 Sobic002G134001 Sobic004G083300--Sobic002G134001 Sobic004G327300 Sobic004G327300 Sobic004G083300--Sobic004G327300 Sobic009G131100 Sobic009G131100 Sobic004G083300--Sobic009G131100 Sobic006G212100 Sobic006G212100 Sobic004G083300--Sobic006G212100 Sobic009G174900 Sobic009G174900 Sobic004G083300--Sobic009G174900 Sobic001G463100 Sobic001G463100 Sobic004G083300--Sobic001G463100 Sobic006G180200 Sobic006G180200 Sobic004G083300--Sobic006G180200 Sobic001G415500 Sobic001G415500 Sobic004G083300--Sobic001G415500 Sobic001G024500 Sobic001G024500 Sobic003G075000--Sobic001G024500 Sobic001G131400 Sobic001G131400 Sobic003G075000--Sobic001G131400 Sobic006G100600 Sobic006G100600 Sobic003G075000--Sobic006G100600 Sobic007G194700 Sobic007G194700 Sobic003G075000--Sobic007G194700 Sobic002G345850 Sobic002G345850 Sobic003G075000--Sobic002G345850 Sobic005G107300 Sobic005G107300 Sobic003G075000--Sobic005G107300 Sobic001G087900 Sobic001G087900 Sobic003G075000--Sobic001G087900 Sobic003G075000--Sobic001G072800 Sobic002G066400 Sobic002G066400 Sobic003G075000--Sobic002G066400 Sobic010G241300 Sobic010G241300 Sobic007G213300--Sobic010G241300 Sobic002G316700 Sobic002G316700 Sobic007G213300--Sobic002G316700 Sobic009G190500 Sobic009G190500 Sobic007G213300--Sobic009G190500 Sobic009G143100 Sobic009G143100 Sobic007G213300--Sobic009G143100 Sobic002G030500 Sobic002G030500 Sobic007G213300--Sobic002G030500 Sobic007G223500 Sobic007G223500 Sobic007G213300--Sobic007G223500 Sobic001G078400 Sobic001G078400 Sobic007G213300--Sobic001G078400 Sobic006G220800 Sobic006G220800 Sobic007G213300--Sobic006G220800 Sobic001G338700 Sobic001G338700 Sobic007G213300--Sobic001G338700 Sobic010G089200 Sobic010G089200 Sobic003G291400--Sobic010G089200 Sobic001G321600 Sobic001G321600 Sobic003G291400--Sobic001G321600 Sobic005G089000 Sobic005G089000 Sobic003G291400--Sobic005G089000 Sobic002G281000 Sobic002G281000 Sobic003G291400--Sobic002G281000 Sobic006G131800 Sobic006G131800 Sobic003G291400--Sobic006G131800 Sobic002G195700 Sobic002G195700 Sobic003G291400--Sobic002G195700 Sobic002G281800 Sobic002G281800 Sobic003G291400--Sobic002G281800 Sobic001G005500 Sobic001G005500 Sobic003G291400--Sobic001G005500 Sobic005G021600 Sobic005G021600 Sobic003G291400--Sobic005G021600 Sobic008G067100 Sobic008G067100 Sobic007G171950--Sobic008G067100 Sobic001G096300 Sobic001G096300 Sobic007G171950--Sobic001G096300 Sobic007G095500 Sobic007G095500 Sobic007G171950--Sobic007G095500 Sobic007G171950--Sobic002G122600 Sobic001G296400 Sobic001G296400 Sobic007G171950--Sobic001G296400 Sobic007G171950--Sobic010G108900 Sobic009G207100 Sobic009G207100 Sobic007G171950--Sobic009G207100 Sobic001G263000 Sobic001G263000 Sobic007G171950--Sobic001G263000 Sobic003G265500 Sobic003G265500 Sobic007G171950--Sobic003G265500
Octagon: transcription factors


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