Gene annotation
Transcriptome id Sobic.010G037300.1,Sobic.010G037300.2
Synonym MK1, Sb10g003310, MKK2, ATMKK2
Functional annotation OsMKK1 - putative MAPKK based on amino acid sequence homology, expressed
UniProt A0A194YH51
Pfam PF14531
Panther DB PTHR24361 PTHR24361:SF385
NCBI CDD KOG0581; Mitogen-activated protein kinase kinase (MAP2K)
KEGG Orthology K04368; MAP2K1, mitogen-activated protein kinase kinase 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G29810 : MAP kinase kinase 2
RAP-DB (Rice) LOC_Os06g05520.1 : OsMKK1 - putative MAPKK based on amino acid sequence homology, expressed
MaizeGDB (Corn) Zm00025a050037
Brachypodium KQK19876 , KQK19877
Barley -
Wheat TraesCS7A02G096800 , TraesCS7D02G092900 , TraesCS4A02G396700 , TraesCS4A02G396700
Populus -


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cDNA sequences
Sobic.010G037300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G209900 non-receptor tyrosine kinase spore lysis A, putative, expressed -
2 Sobic.001G432800 -(PubMedID : 26976818)@phosphoenolpyruvate carboxykinase, putative, expressed K01610: E4.1.1.49, phosphoenolpyruvate carboxykinase (ATP)
3 Sobic.005G095900 cysteine-rich receptor-like protein kinase 21 precursor, putative, expressed -
4 Sobic.003G217400 zinc finger, C3HC4 type family protein, expressed -
5 Sobic.001G314500 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
6 Sobic.004G069850 - -
7 Sobic.004G204900 glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
8 Sobic.001G501200 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
9 Sobic.008G189300 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
10 Sobic.006G269000 protein kinase, putative, expressed -
11 Sobic.003G075000 expressed protein -
12 Sobic.006G004600 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
13 Sobic.004G083300 OsFBL7 - F-box domain and LRR containing protein, expressed K14515: EIN3-binding F-box protein
14 Sobic.003G077900 vacuolar protein sorting-associating protein 4B, putative, expressed K12196: vacuolar protein-sorting-associated protein 4
15 Sobic.002G155500 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
16 Sobic.005G182500 jacalin-like lectin domain containing protein, expressed -
17 Sobic.001G087900 expressed protein -
18 Sobic.010G121300 nitrate-induced NOI protein, putative, expressed -
19 Sobic.001G364600 transmembrane protein 85, putative, expressed -
20 Sobic.001G072800 expressed protein -


Gene co-expression network
sample Sobic010G037300 Sobic010G037300 Sobic004G209900 Sobic004G209900 Sobic010G037300--Sobic004G209900 Sobic001G432800 Sobic001G432800 Sobic010G037300--Sobic001G432800 Sobic005G095900 Sobic005G095900 Sobic010G037300--Sobic005G095900 Sobic003G217400 Sobic003G217400 Sobic010G037300--Sobic003G217400 Sobic001G314500 Sobic001G314500 Sobic010G037300--Sobic001G314500 Sobic004G069850 Sobic004G069850 Sobic010G037300--Sobic004G069850 Sobic004G204900 Sobic004G204900 Sobic010G037300--Sobic004G204900 Sobic001G501200 Sobic001G501200 Sobic010G037300--Sobic001G501200 Sobic008G189300 Sobic008G189300 Sobic010G037300--Sobic008G189300 Sobic004G209900--Sobic008G189300 Sobic010G135000 Sobic010G135000 Sobic004G209900--Sobic010G135000 Sobic004G209900--Sobic010G037300 Sobic006G180200 Sobic006G180200 Sobic004G209900--Sobic006G180200 Sobic005G228000 Sobic005G228000 Sobic004G209900--Sobic005G228000 Sobic003G130800 Sobic003G130800 Sobic004G209900--Sobic003G130800 Sobic002G212200 Sobic002G212200 Sobic004G209900--Sobic002G212200 Sobic004G209900--Sobic005G095900 Sobic001G220400 Sobic001G220400 Sobic004G209900--Sobic001G220400 Sobic001G432800--Sobic004G209900 Sobic001G432800--Sobic010G037300 Sobic003G228000 Sobic003G228000 Sobic001G432800--Sobic003G228000 Sobic004G083300 Sobic004G083300 Sobic001G432800--Sobic004G083300 Sobic002G155500 Sobic002G155500 Sobic001G432800--Sobic002G155500 Sobic002G247500 Sobic002G247500 Sobic001G432800--Sobic002G247500 Sobic010G121300 Sobic010G121300 Sobic001G432800--Sobic010G121300 Sobic002G223200 Sobic002G223200 Sobic001G432800--Sobic002G223200 Sobic001G432800--Sobic004G204900 Sobic005G095900--Sobic001G220400 Sobic005G095900--Sobic004G209900 Sobic005G095900--Sobic005G228000 Sobic005G095900--Sobic004G069850 Sobic001G343900 Sobic001G343900 Sobic005G095900--Sobic001G343900 Sobic004G308400 Sobic004G308400 Sobic005G095900--Sobic004G308400 Sobic005G095900--Sobic010G121300 Sobic002G122700 Sobic002G122700 Sobic005G095900--Sobic002G122700 Sobic003G077900 Sobic003G077900 Sobic005G095900--Sobic003G077900 Sobic003G261500 Sobic003G261500 Sobic003G217400--Sobic003G261500 Sobic003G217400--Sobic003G077900 Sobic009G004600 Sobic009G004600 Sobic003G217400--Sobic009G004600 Sobic002G400000 Sobic002G400000 Sobic003G217400--Sobic002G400000 Sobic003G217400--Sobic001G314500 Sobic010G000900 Sobic010G000900 Sobic003G217400--Sobic010G000900 Sobic009G198500 Sobic009G198500 Sobic003G217400--Sobic009G198500 Sobic001G051200 Sobic001G051200 Sobic003G217400--Sobic001G051200 Sobic007G168600 Sobic007G168600 Sobic003G217400--Sobic007G168600 Sobic006G212100 Sobic006G212100 Sobic001G314500--Sobic006G212100 Sobic001G314500--Sobic009G198500 Sobic001G314500--Sobic007G168600 Sobic001G388200 Sobic001G388200 Sobic001G314500--Sobic001G388200 Sobic006G232200 Sobic006G232200 Sobic001G314500--Sobic006G232200 Sobic001G054200 Sobic001G054200 Sobic001G314500--Sobic001G054200 Sobic001G314500--Sobic009G004600 Sobic010G205300 Sobic010G205300 Sobic001G314500--Sobic010G205300 Sobic001G314500--Sobic003G217400 Sobic004G069850--Sobic007G168600 Sobic004G069850--Sobic002G400000 Sobic004G069850--Sobic001G314500 Sobic010G101500 Sobic010G101500 Sobic004G069850--Sobic010G101500 Sobic001G433400 Sobic001G433400 Sobic004G069850--Sobic001G433400 Sobic004G069850--Sobic009G198500 Sobic004G069850--Sobic004G209900 Sobic004G069850--Sobic005G095900 Sobic010G188100 Sobic010G188100 Sobic004G069850--Sobic010G188100 Sobic002G153500 Sobic002G153500 Sobic004G204900--Sobic002G153500 Sobic004G204900--Sobic008G189300 Sobic004G204900--Sobic002G155500 Sobic004G225500 Sobic004G225500 Sobic004G204900--Sobic004G225500 Sobic001G459500 Sobic001G459500 Sobic004G204900--Sobic001G459500 Sobic003G367451 Sobic003G367451 Sobic004G204900--Sobic003G367451 Sobic004G272800 Sobic004G272800 Sobic004G204900--Sobic004G272800 Sobic003G323600 Sobic003G323600 Sobic004G204900--Sobic003G323600 Sobic007G114200 Sobic007G114200 Sobic004G204900--Sobic007G114200 Sobic001G501200--Sobic009G198500 Sobic007G096700 Sobic007G096700 Sobic001G501200--Sobic007G096700 Sobic001G005900 Sobic001G005900 Sobic001G501200--Sobic001G005900 Sobic001G501200--Sobic007G168600 Sobic001G428100 Sobic001G428100 Sobic001G501200--Sobic001G428100 Sobic003G124800 Sobic003G124800 Sobic001G501200--Sobic003G124800 Sobic001G502200 Sobic001G502200 Sobic001G501200--Sobic001G502200 Sobic004G300900 Sobic004G300900 Sobic001G501200--Sobic004G300900 Sobic004G130100 Sobic004G130100 Sobic001G501200--Sobic004G130100 Sobic008G189300--Sobic004G225500 Sobic008G189300--Sobic004G272800 Sobic001G224400 Sobic001G224400 Sobic008G189300--Sobic001G224400 Sobic008G189300--Sobic002G153500 Sobic010G154700 Sobic010G154700 Sobic008G189300--Sobic010G154700 Sobic001G132100 Sobic001G132100 Sobic008G189300--Sobic001G132100 Sobic002G187500 Sobic002G187500 Sobic008G189300--Sobic002G187500 Sobic001G048832 Sobic001G048832 Sobic008G189300--Sobic001G048832 Sobic001G340500 Sobic001G340500 Sobic008G189300--Sobic001G340500
Octagon: transcription factors


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