Gene annotation
Transcriptome id Sobic.001G432800.2,Sobic.001G432800.1
Synonym PCK1, PEPCK, Sb01g040720, PCK1, PEPCK
Functional annotation - (PubMedID : 26976818)
phosphoenolpyruvate carboxykinase, putative, expressed
UniProt A0A1B6QPA5
Pfam PF01293
Panther DB PTHR30031 PTHR30031:SF4
NCBI CDD -
KEGG Orthology K01610; E4.1.1.49, phosphoenolpyruvate carboxykinase (ATP)
Gene Ontology GO:0006094; gluconeogenesis GO:0005524ATP binding GO:0004612phosphoenolpyruvate carboxykinase (ATP) activity


Orthologs (automatic annotation)
TAIR AT4G37870 : phosphoenolpyruvate carboxykinase 1
RAP-DB (Rice) LOC_Os03g15050.2 : phosphoenolpyruvate carboxykinase, putative, expressed
MaizeGDB (Corn) Zm00025a001643 , Zm00025a052843 , Zm00025a015783
Brachypodium KQK22511 , KQK22510
Barley HORVU4Hr1G062440.8 , HORVU4Hr1G062440.9 , HORVU4Hr1G062440.2 , HORVU4Hr1G062440.3 , HORVU4Hr1G062440.1 , HORVU4Hr1G062440.6 , HORVU4Hr1G062440.7 , HORVU4Hr1G062440.4 , HORVU4Hr1G062440.5 , HORVU4Hr1G062440.10 , HORVU2Hr1G029160.4 , HORVU2Hr1G029160.2 , HORVU2Hr1G029160.3 , HORVU2Hr1G029160.1
Wheat TraesCS4D02G220500 , TraesCS4B02G220200 , TraesCS4A02G083900
Populus PNT26422 , PNT26423 , PNT26425 , PNT26426


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G209900 non-receptor tyrosine kinase spore lysis A, putative, expressed -
2 Sobic.010G037300 OsMKK1 - putative MAPKK based on amino acid sequence homology, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
3 Sobic.003G228000 cytochrome P450 72A1, putative, expressed -
4 Sobic.004G083300 OsFBL7 - F-box domain and LRR containing protein, expressed K14515: EIN3-binding F-box protein
5 Sobic.002G155500 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
6 Sobic.002G247500 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
7 Sobic.010G121300 nitrate-induced NOI protein, putative, expressed -
8 Sobic.002G223200 OsSigP6 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K03100: signal peptidase I
9 Sobic.004G204900 glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
10 Sobic.010G253800 expressed protein -
11 Sobic.008G189300 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
12 Sobic.002G251700 no apical meristem protein, putative, expressed -
13 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -
14 Sobic.004G017800 ubiquitin-conjugating enzyme 28(PubMedID : 26465154)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
15 Sobic.004G157800 LITAF-domain-containing protein, putative, expressed K19363: lipopolysaccharide-induced tumor necrosis factor-alpha factor
16 Sobic.004G225500 bolA, putative, expressed K05527: BolA family transcriptional regulator, general stress-responsive regulator
17 Sobic.002G212200 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
18 Sobic.002G345850 - -
19 Sobic.005G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G415500 zinc finger, C3HC4 type domain containing protein, expressed K13125: nitric oxide synthase-interacting protein


Gene co-expression network
sample Sobic001G432800 Sobic001G432800 Sobic004G209900 Sobic004G209900 Sobic001G432800--Sobic004G209900 Sobic010G037300 Sobic010G037300 Sobic001G432800--Sobic010G037300 Sobic003G228000 Sobic003G228000 Sobic001G432800--Sobic003G228000 Sobic004G083300 Sobic004G083300 Sobic001G432800--Sobic004G083300 Sobic002G155500 Sobic002G155500 Sobic001G432800--Sobic002G155500 Sobic002G247500 Sobic002G247500 Sobic001G432800--Sobic002G247500 Sobic010G121300 Sobic010G121300 Sobic001G432800--Sobic010G121300 Sobic002G223200 Sobic002G223200 Sobic001G432800--Sobic002G223200 Sobic004G204900 Sobic004G204900 Sobic001G432800--Sobic004G204900 Sobic008G189300 Sobic008G189300 Sobic004G209900--Sobic008G189300 Sobic010G135000 Sobic010G135000 Sobic004G209900--Sobic010G135000 Sobic004G209900--Sobic010G037300 Sobic006G180200 Sobic006G180200 Sobic004G209900--Sobic006G180200 Sobic005G228000 Sobic005G228000 Sobic004G209900--Sobic005G228000 Sobic003G130800 Sobic003G130800 Sobic004G209900--Sobic003G130800 Sobic002G212200 Sobic002G212200 Sobic004G209900--Sobic002G212200 Sobic005G095900 Sobic005G095900 Sobic004G209900--Sobic005G095900 Sobic001G220400 Sobic001G220400 Sobic004G209900--Sobic001G220400 Sobic010G037300--Sobic004G209900 Sobic010G037300--Sobic001G432800 Sobic010G037300--Sobic005G095900 Sobic003G217400 Sobic003G217400 Sobic010G037300--Sobic003G217400 Sobic001G314500 Sobic001G314500 Sobic010G037300--Sobic001G314500 Sobic004G069850 Sobic004G069850 Sobic010G037300--Sobic004G069850 Sobic010G037300--Sobic004G204900 Sobic001G501200 Sobic001G501200 Sobic010G037300--Sobic001G501200 Sobic010G037300--Sobic008G189300 Sobic010G071900 Sobic010G071900 Sobic003G228000--Sobic010G071900 Sobic005G195100 Sobic005G195100 Sobic003G228000--Sobic005G195100 Sobic010G243200 Sobic010G243200 Sobic003G228000--Sobic010G243200 Sobic010G185500 Sobic010G185500 Sobic003G228000--Sobic010G185500 Sobic002G180600 Sobic002G180600 Sobic003G228000--Sobic002G180600 Sobic003G228000--Sobic010G121300 Sobic010G253800 Sobic010G253800 Sobic003G228000--Sobic010G253800 Sobic002G282400 Sobic002G282400 Sobic003G228000--Sobic002G282400 Sobic001G319500 Sobic001G319500 Sobic003G228000--Sobic001G319500 Sobic004G083300--Sobic010G135000 Sobic002G134001 Sobic002G134001 Sobic004G083300--Sobic002G134001 Sobic004G327300 Sobic004G327300 Sobic004G083300--Sobic004G327300 Sobic009G131100 Sobic009G131100 Sobic004G083300--Sobic009G131100 Sobic006G212100 Sobic006G212100 Sobic004G083300--Sobic006G212100 Sobic009G174900 Sobic009G174900 Sobic004G083300--Sobic009G174900 Sobic001G463100 Sobic001G463100 Sobic004G083300--Sobic001G463100 Sobic004G083300--Sobic006G180200 Sobic001G415500 Sobic001G415500 Sobic004G083300--Sobic001G415500 Sobic004G225500 Sobic004G225500 Sobic002G155500--Sobic004G225500 Sobic002G155500--Sobic010G121300 Sobic004G351500 Sobic004G351500 Sobic002G155500--Sobic004G351500 Sobic007G078100 Sobic007G078100 Sobic002G155500--Sobic007G078100 Sobic004G272800 Sobic004G272800 Sobic002G155500--Sobic004G272800 Sobic001G048832 Sobic001G048832 Sobic002G155500--Sobic001G048832 Sobic004G276100 Sobic004G276100 Sobic002G155500--Sobic004G276100 Sobic002G153500 Sobic002G153500 Sobic002G155500--Sobic002G153500 Sobic002G233100 Sobic002G233100 Sobic002G155500--Sobic002G233100 Sobic002G247500--Sobic010G253800 Sobic001G007200 Sobic001G007200 Sobic002G247500--Sobic001G007200 Sobic010G083700 Sobic010G083700 Sobic002G247500--Sobic010G083700 Sobic004G293700 Sobic004G293700 Sobic002G247500--Sobic004G293700 Sobic009G146100 Sobic009G146100 Sobic002G247500--Sobic009G146100 Sobic002G247500--Sobic002G223200 Sobic006G263900 Sobic006G263900 Sobic002G247500--Sobic006G263900 Sobic002G264400 Sobic002G264400 Sobic002G247500--Sobic002G264400 Sobic010G000900 Sobic010G000900 Sobic002G247500--Sobic010G000900 Sobic009G178100 Sobic009G178100 Sobic010G121300--Sobic009G178100 Sobic010G121300--Sobic002G155500 Sobic010G121300--Sobic004G225500 Sobic006G141500 Sobic006G141500 Sobic010G121300--Sobic006G141500 Sobic003G253000 Sobic003G253000 Sobic010G121300--Sobic003G253000 Sobic009G185800 Sobic009G185800 Sobic010G121300--Sobic009G185800 Sobic010G121300--Sobic001G415500 Sobic004G300900 Sobic004G300900 Sobic010G121300--Sobic004G300900 Sobic010G121300--Sobic009G146100 Sobic003G295400 Sobic003G295400 Sobic002G223200--Sobic003G295400 Sobic002G223200--Sobic010G253800 Sobic002G223200--Sobic002G247500 Sobic002G223200--Sobic010G000900 Sobic002G122700 Sobic002G122700 Sobic002G223200--Sobic002G122700 Sobic006G225600 Sobic006G225600 Sobic002G223200--Sobic006G225600 Sobic004G234900 Sobic004G234900 Sobic002G223200--Sobic004G234900 Sobic008G107500 Sobic008G107500 Sobic002G223200--Sobic008G107500 Sobic010G168600 Sobic010G168600 Sobic002G223200--Sobic010G168600 Sobic004G204900--Sobic002G153500 Sobic004G204900--Sobic008G189300 Sobic004G204900--Sobic002G155500 Sobic004G204900--Sobic004G225500 Sobic001G459500 Sobic001G459500 Sobic004G204900--Sobic001G459500 Sobic003G367451 Sobic003G367451 Sobic004G204900--Sobic003G367451 Sobic004G204900--Sobic004G272800 Sobic003G323600 Sobic003G323600 Sobic004G204900--Sobic003G323600 Sobic007G114200 Sobic007G114200 Sobic004G204900--Sobic007G114200
Octagon: transcription factors


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