Gene annotation
Transcriptome id Sobic.004G209900.1
Synonym
Functional annotation non-receptor tyrosine kinase spore lysis A, putative, expressed
UniProt A0A194YQU8
Pfam PF12796 PF07714
Panther DB PTHR23257 PTHR23257:SF543
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G31800 : Integrin-linked protein kinase family
RAP-DB (Rice) LOC_Os02g39560.1 : non-receptor tyrosine kinase spore lysis A, putative, expressed
MaizeGDB (Corn) Zm00025a027576 , Zm00025a021225
Brachypodium KQK00273
Barley HORVU6Hr1G055820.8 , HORVU6Hr1G055820.9 , HORVU6Hr1G055820.2 , HORVU6Hr1G055820.3 , HORVU6Hr1G055820.4 , HORVU6Hr1G055820.5 , HORVU6Hr1G055820.6 , HORVU6Hr1G055820.7 , HORVU6Hr1G055820.12 , HORVU6Hr1G055820.10 , HORVU6Hr1G055820.11
Wheat TraesCS6D02G201400 , TraesCS6D02G201400 , TraesCS6B02G247800 , TraesCS6A02G218200 , TraesCS6A02G218200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G189300 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
2 Sobic.010G135000 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
3 Sobic.010G037300 OsMKK1 - putative MAPKK based on amino acid sequence homology, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
4 Sobic.006G180200 transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
5 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
6 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
7 Sobic.002G212200 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
8 Sobic.005G095900 cysteine-rich receptor-like protein kinase 21 precursor, putative, expressed -
9 Sobic.001G220400 SNF7 domain containing protein, putative, expressed K12192: charged multivesicular body protein 2B
10 Sobic.010G121300 nitrate-induced NOI protein, putative, expressed -
11 Sobic.004G225500 bolA, putative, expressed K05527: BolA family transcriptional regulator, general stress-responsive regulator
12 Sobic.010G185500 ethanol tolerance protein GEKO1, putative, expressed K09716: dtdA, D-aminoacyl-tRNA deacylase
13 Sobic.008G033600 Pyruvate kinase family protein(PubMedID : 26465154)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
14 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
15 Sobic.001G353600 expressed protein -
16 Sobic.004G069850 - -
17 Sobic.001G428200 expressed protein -
18 Sobic.005G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.004G017800 ubiquitin-conjugating enzyme 28(PubMedID : 26465154)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
20 Sobic.001G432800 -(PubMedID : 26976818)@phosphoenolpyruvate carboxykinase, putative, expressed K01610: E4.1.1.49, phosphoenolpyruvate carboxykinase (ATP)


Gene co-expression network
sample Sobic004G209900 Sobic004G209900 Sobic008G189300 Sobic008G189300 Sobic004G209900--Sobic008G189300 Sobic010G135000 Sobic010G135000 Sobic004G209900--Sobic010G135000 Sobic010G037300 Sobic010G037300 Sobic004G209900--Sobic010G037300 Sobic006G180200 Sobic006G180200 Sobic004G209900--Sobic006G180200 Sobic005G228000 Sobic005G228000 Sobic004G209900--Sobic005G228000 Sobic003G130800 Sobic003G130800 Sobic004G209900--Sobic003G130800 Sobic002G212200 Sobic002G212200 Sobic004G209900--Sobic002G212200 Sobic005G095900 Sobic005G095900 Sobic004G209900--Sobic005G095900 Sobic001G220400 Sobic001G220400 Sobic004G209900--Sobic001G220400 Sobic004G225500 Sobic004G225500 Sobic008G189300--Sobic004G225500 Sobic004G272800 Sobic004G272800 Sobic008G189300--Sobic004G272800 Sobic001G224400 Sobic001G224400 Sobic008G189300--Sobic001G224400 Sobic002G153500 Sobic002G153500 Sobic008G189300--Sobic002G153500 Sobic010G154700 Sobic010G154700 Sobic008G189300--Sobic010G154700 Sobic001G132100 Sobic001G132100 Sobic008G189300--Sobic001G132100 Sobic002G187500 Sobic002G187500 Sobic008G189300--Sobic002G187500 Sobic001G048832 Sobic001G048832 Sobic008G189300--Sobic001G048832 Sobic001G340500 Sobic001G340500 Sobic008G189300--Sobic001G340500 Sobic010G135000--Sobic003G130800 Sobic010G135000--Sobic006G180200 Sobic002G345300 Sobic002G345300 Sobic010G135000--Sobic002G345300 Sobic003G181500 Sobic003G181500 Sobic010G135000--Sobic003G181500 Sobic001G459200 Sobic001G459200 Sobic010G135000--Sobic001G459200 Sobic009G023200 Sobic009G023200 Sobic010G135000--Sobic009G023200 Sobic003G350300 Sobic003G350300 Sobic010G135000--Sobic003G350300 Sobic004G330700 Sobic004G330700 Sobic010G135000--Sobic004G330700 Sobic009G185800 Sobic009G185800 Sobic010G135000--Sobic009G185800 Sobic010G037300--Sobic004G209900 Sobic001G432800 Sobic001G432800 Sobic010G037300--Sobic001G432800 Sobic010G037300--Sobic005G095900 Sobic003G217400 Sobic003G217400 Sobic010G037300--Sobic003G217400 Sobic001G314500 Sobic001G314500 Sobic010G037300--Sobic001G314500 Sobic004G069850 Sobic004G069850 Sobic010G037300--Sobic004G069850 Sobic004G204900 Sobic004G204900 Sobic010G037300--Sobic004G204900 Sobic001G501200 Sobic001G501200 Sobic010G037300--Sobic001G501200 Sobic010G037300--Sobic008G189300 Sobic006G180200--Sobic003G130800 Sobic006G180200--Sobic010G135000 Sobic006G180200--Sobic009G185800 Sobic004G055200 Sobic004G055200 Sobic006G180200--Sobic004G055200 Sobic001G131400 Sobic001G131400 Sobic006G180200--Sobic001G131400 Sobic008G033600 Sobic008G033600 Sobic006G180200--Sobic008G033600 Sobic004G187900 Sobic004G187900 Sobic006G180200--Sobic004G187900 Sobic006G180200--Sobic003G181500 Sobic006G180200--Sobic008G189300 Sobic001G019900 Sobic001G019900 Sobic005G228000--Sobic001G019900 Sobic005G228000--Sobic002G212200 Sobic001G067601 Sobic001G067601 Sobic005G228000--Sobic001G067601 Sobic005G228000--Sobic002G345300 Sobic005G228000--Sobic009G023200 Sobic004G157000 Sobic004G157000 Sobic005G228000--Sobic004G157000 Sobic005G228000--Sobic003G350300 Sobic009G094450 Sobic009G094450 Sobic005G228000--Sobic009G094450 Sobic010G047400 Sobic010G047400 Sobic005G228000--Sobic010G047400 Sobic003G130800--Sobic009G185800 Sobic003G253000 Sobic003G253000 Sobic003G130800--Sobic003G253000 Sobic003G130800--Sobic001G459200 Sobic003G130800--Sobic006G180200 Sobic003G130800--Sobic002G345300 Sobic004G049900 Sobic004G049900 Sobic003G130800--Sobic004G049900 Sobic003G130800--Sobic004G055200 Sobic003G130800--Sobic010G135000 Sobic003G130800--Sobic003G181500 Sobic002G212200--Sobic005G228000 Sobic002G212200--Sobic001G019900 Sobic002G212200--Sobic001G067601 Sobic007G107000 Sobic007G107000 Sobic002G212200--Sobic007G107000 Sobic002G212200--Sobic003G181500 Sobic003G162700 Sobic003G162700 Sobic002G212200--Sobic003G162700 Sobic002G212200--Sobic009G023200 Sobic002G282400 Sobic002G282400 Sobic002G212200--Sobic002G282400 Sobic001G064800 Sobic001G064800 Sobic002G212200--Sobic001G064800 Sobic005G095900--Sobic001G220400 Sobic005G095900--Sobic004G209900 Sobic005G095900--Sobic005G228000 Sobic005G095900--Sobic004G069850 Sobic001G343900 Sobic001G343900 Sobic005G095900--Sobic001G343900 Sobic004G308400 Sobic004G308400 Sobic005G095900--Sobic004G308400 Sobic010G121300 Sobic010G121300 Sobic005G095900--Sobic010G121300 Sobic002G122700 Sobic002G122700 Sobic005G095900--Sobic002G122700 Sobic003G077900 Sobic003G077900 Sobic005G095900--Sobic003G077900 Sobic010G188100 Sobic010G188100 Sobic001G220400--Sobic010G188100 Sobic009G219900 Sobic009G219900 Sobic001G220400--Sobic009G219900 Sobic010G101500 Sobic010G101500 Sobic001G220400--Sobic010G101500 Sobic001G220400--Sobic003G077900 Sobic003G367451 Sobic003G367451 Sobic001G220400--Sobic003G367451 Sobic003G220600 Sobic003G220600 Sobic001G220400--Sobic003G220600 Sobic009G001400 Sobic009G001400 Sobic001G220400--Sobic009G001400 Sobic006G163000 Sobic006G163000 Sobic001G220400--Sobic006G163000 Sobic001G220400--Sobic002G122700
Octagon: transcription factors


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