Gene annotation
Transcriptome id Sobic.005G038900.1
Synonym Sb05g003260
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Y4Q1
Pfam -
Panther DB PTHR33148 PTHR33148:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03890 : -
RAP-DB (Rice) LOC_Os11g05490.1 : expressed protein
MaizeGDB (Corn) Zm00025a013010 , Zm00025a033495
Brachypodium KQJ92215
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G362100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane amino acid transporter protein, putative, expressed -
2 Sobic.007G025500 amino acid transporter, putative, expressed -
3 Sobic.004G088551 - -
4 Sobic.004G216600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsGrx_C2.1 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
5 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
6 Sobic.008G032100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.007G145600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@4-Coumarate-CoA ligase(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
8 Sobic.010G009300 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
9 Sobic.010G071900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
10 Sobic.007G135201 - -
11 Sobic.003G206900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
12 Sobic.009G120000 - -
13 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
14 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.006G107200 molybdopterin biosynthesis protein CNX3, putative, expressed K03639: moaA, GTP 3',8-cyclase
16 Sobic.001G453100 homocysteine S-methyltransferase protein, putative, expressed K00547: mmuM, homocysteine S-methyltransferase
17 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
18 Sobic.007G187800 mtN19, putative, expressed -
19 Sobic.002G109400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LTPL40 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.001G252300 pectinesterase, putative, expressed K01051: pectinesterase


Gene co-expression network
sample Sobic005G038900 Sobic005G038900 Sobic003G362100 Sobic003G362100 Sobic005G038900--Sobic003G362100 Sobic007G025500 Sobic007G025500 Sobic005G038900--Sobic007G025500 Sobic004G088551 Sobic004G088551 Sobic005G038900--Sobic004G088551 Sobic004G216600 Sobic004G216600 Sobic005G038900--Sobic004G216600 Sobic006G173900 Sobic006G173900 Sobic005G038900--Sobic006G173900 Sobic008G032100 Sobic008G032100 Sobic005G038900--Sobic008G032100 Sobic007G145600 Sobic007G145600 Sobic005G038900--Sobic007G145600 Sobic010G009300 Sobic010G009300 Sobic005G038900--Sobic010G009300 Sobic010G071900 Sobic010G071900 Sobic005G038900--Sobic010G071900 Sobic003G362100--Sobic010G009300 Sobic001G348700 Sobic001G348700 Sobic003G362100--Sobic001G348700 Sobic004G111800 Sobic004G111800 Sobic003G362100--Sobic004G111800 Sobic003G362100--Sobic005G038900 Sobic001G252300 Sobic001G252300 Sobic003G362100--Sobic001G252300 Sobic003G252800 Sobic003G252800 Sobic003G362100--Sobic003G252800 Sobic008G060050 Sobic008G060050 Sobic003G362100--Sobic008G060050 Sobic003G362100--Sobic008G032100 Sobic010G117900 Sobic010G117900 Sobic003G362100--Sobic010G117900 Sobic002G034800 Sobic002G034800 Sobic007G025500--Sobic002G034800 Sobic001G119400 Sobic001G119400 Sobic007G025500--Sobic001G119400 Sobic003G297600 Sobic003G297600 Sobic007G025500--Sobic003G297600 Sobic002G366600 Sobic002G366600 Sobic007G025500--Sobic002G366600 Sobic009G139400 Sobic009G139400 Sobic007G025500--Sobic009G139400 Sobic010G066700 Sobic010G066700 Sobic007G025500--Sobic010G066700 Sobic009G183400 Sobic009G183400 Sobic007G025500--Sobic009G183400 Sobic009G077800 Sobic009G077800 Sobic007G025500--Sobic009G077800 Sobic010G136000 Sobic010G136000 Sobic007G025500--Sobic010G136000 Sobic001G317000 Sobic001G317000 Sobic004G088551--Sobic001G317000 Sobic002G195400 Sobic002G195400 Sobic004G088551--Sobic002G195400 Sobic005G101800 Sobic005G101800 Sobic004G088551--Sobic005G101800 Sobic007G067600 Sobic007G067600 Sobic004G088551--Sobic007G067600 Sobic004G088551--Sobic010G117900 Sobic001G317200 Sobic001G317200 Sobic004G088551--Sobic001G317200 Sobic001G423800 Sobic001G423800 Sobic004G088551--Sobic001G423800 Sobic007G061300 Sobic007G061300 Sobic004G088551--Sobic007G061300 Sobic004G112300 Sobic004G112300 Sobic004G088551--Sobic004G112300 Sobic009G061200 Sobic009G061200 Sobic004G216600--Sobic009G061200 Sobic004G216600--Sobic001G119400 Sobic001G319600 Sobic001G319600 Sobic004G216600--Sobic001G319600 Sobic004G216600--Sobic001G317200 Sobic004G216600--Sobic009G183400 Sobic002G393000 Sobic002G393000 Sobic004G216600--Sobic002G393000 Sobic004G221500 Sobic004G221500 Sobic004G216600--Sobic004G221500 Sobic004G216600--Sobic001G423800 Sobic004G216600--Sobic001G348700 Sobic009G008900 Sobic009G008900 Sobic006G173900--Sobic009G008900 Sobic010G099900 Sobic010G099900 Sobic006G173900--Sobic010G099900 Sobic006G173900--Sobic002G393000 Sobic006G275200 Sobic006G275200 Sobic006G173900--Sobic006G275200 Sobic008G136400 Sobic008G136400 Sobic006G173900--Sobic008G136400 Sobic002G414600 Sobic002G414600 Sobic006G173900--Sobic002G414600 Sobic006G173900--Sobic001G119400 Sobic006G173900--Sobic001G423800 Sobic004G177700 Sobic004G177700 Sobic006G173900--Sobic004G177700 Sobic008G032100--Sobic010G009300 Sobic005G084600 Sobic005G084600 Sobic008G032100--Sobic005G084600 Sobic007G087200 Sobic007G087200 Sobic008G032100--Sobic007G087200 Sobic001G177800 Sobic001G177800 Sobic008G032100--Sobic001G177800 Sobic005G195301 Sobic005G195301 Sobic008G032100--Sobic005G195301 Sobic002G187500 Sobic002G187500 Sobic008G032100--Sobic002G187500 Sobic008G032100--Sobic009G077800 Sobic003G113700 Sobic003G113700 Sobic008G032100--Sobic003G113700 Sobic005G206601 Sobic005G206601 Sobic008G032100--Sobic005G206601 Sobic007G145600--Sobic001G317200 Sobic010G239300 Sobic010G239300 Sobic007G145600--Sobic010G239300 Sobic001G339700 Sobic001G339700 Sobic007G145600--Sobic001G339700 Sobic001G119100 Sobic001G119100 Sobic007G145600--Sobic001G119100 Sobic002G104900 Sobic002G104900 Sobic007G145600--Sobic002G104900 Sobic010G084400 Sobic010G084400 Sobic007G145600--Sobic010G084400 Sobic010G178500 Sobic010G178500 Sobic007G145600--Sobic010G178500 Sobic007G145600--Sobic001G252300 Sobic007G145600--Sobic003G252800 Sobic010G009300--Sobic001G177800 Sobic007G184600 Sobic007G184600 Sobic010G009300--Sobic007G184600 Sobic010G009300--Sobic009G139400 Sobic010G009300--Sobic002G187500 Sobic002G190900 Sobic002G190900 Sobic010G009300--Sobic002G190900 Sobic010G009300--Sobic001G252300 Sobic010G009300--Sobic009G077800 Sobic006G099900 Sobic006G099900 Sobic010G009300--Sobic006G099900 Sobic004G107700 Sobic004G107700 Sobic010G009300--Sobic004G107700 Sobic010G072000 Sobic010G072000 Sobic010G071900--Sobic010G072000 Sobic005G213200 Sobic005G213200 Sobic010G071900--Sobic005G213200 Sobic010G185500 Sobic010G185500 Sobic010G071900--Sobic010G185500 Sobic001G100700 Sobic001G100700 Sobic010G071900--Sobic001G100700 Sobic009G120000 Sobic009G120000 Sobic010G071900--Sobic009G120000 Sobic009G106800 Sobic009G106800 Sobic010G071900--Sobic009G106800 Sobic001G319500 Sobic001G319500 Sobic010G071900--Sobic001G319500 Sobic003G206900 Sobic003G206900 Sobic010G071900--Sobic003G206900 Sobic010G071900--Sobic005G084600
Octagon: transcription factors


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