Gene annotation
Transcriptome id Sobic.002G109400.1
Synonym DIR1, Sb02g009320
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
LTPL40 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5X3N7
Pfam PF14368
Panther DB PTHR33122 PTHR33122:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48485 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os07g18990.1 : LTPL40 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a045632
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G109400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G038900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.008G011600 ubiquitin-like protein 5, putative, expressed K13113: UBL5, ubiquitin-like protein 5
3 Sobic.004G225500 bolA, putative, expressed K05527: BolA family transcriptional regulator, general stress-responsive regulator
4 Sobic.004G284500 ORM1, putative, expressed -
5 Sobic.001G353600 expressed protein -
6 Sobic.004G158901 - -
7 Sobic.010G041600 profilin domain containing protein, expressed K05759: profilin
8 Sobic.004G351500 - -
9 Sobic.008G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
10 Sobic.004G308400 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
11 Sobic.010G195500 reductase, putative, expressed -
12 Sobic.005G182500 jacalin-like lectin domain containing protein, expressed -
13 Sobic.001G428200 expressed protein -
14 Sobic.006G246100 one cut domain family member 3, putative, expressed -
15 Sobic.008G189300 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
16 Sobic.002G155500 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
17 Sobic.004G276100 expressed protein -
18 Sobic.010G268400 eukaryotic aspartyl protease domain containing protein, expressed -
19 Sobic.009G230100 expressed protein -
20 Sobic.001G087900 expressed protein -


Gene co-expression network
sample Sobic002G109400 Sobic002G109400 Sobic005G038900 Sobic005G038900 Sobic002G109400--Sobic005G038900 Sobic008G011600 Sobic008G011600 Sobic002G109400--Sobic008G011600 Sobic004G225500 Sobic004G225500 Sobic002G109400--Sobic004G225500 Sobic004G284500 Sobic004G284500 Sobic002G109400--Sobic004G284500 Sobic001G353600 Sobic001G353600 Sobic002G109400--Sobic001G353600 Sobic004G158901 Sobic004G158901 Sobic002G109400--Sobic004G158901 Sobic010G041600 Sobic010G041600 Sobic002G109400--Sobic010G041600 Sobic004G351500 Sobic004G351500 Sobic002G109400--Sobic004G351500 Sobic008G059200 Sobic008G059200 Sobic002G109400--Sobic008G059200 Sobic003G362100 Sobic003G362100 Sobic005G038900--Sobic003G362100 Sobic007G025500 Sobic007G025500 Sobic005G038900--Sobic007G025500 Sobic004G088551 Sobic004G088551 Sobic005G038900--Sobic004G088551 Sobic004G216600 Sobic004G216600 Sobic005G038900--Sobic004G216600 Sobic006G173900 Sobic006G173900 Sobic005G038900--Sobic006G173900 Sobic008G032100 Sobic008G032100 Sobic005G038900--Sobic008G032100 Sobic007G145600 Sobic007G145600 Sobic005G038900--Sobic007G145600 Sobic010G009300 Sobic010G009300 Sobic005G038900--Sobic010G009300 Sobic010G071900 Sobic010G071900 Sobic005G038900--Sobic010G071900 Sobic003G181500 Sobic003G181500 Sobic008G011600--Sobic003G181500 Sobic001G536500 Sobic001G536500 Sobic008G011600--Sobic001G536500 Sobic001G390300 Sobic001G390300 Sobic008G011600--Sobic001G390300 Sobic004G037600 Sobic004G037600 Sobic008G011600--Sobic004G037600 Sobic001G445800 Sobic001G445800 Sobic008G011600--Sobic001G445800 Sobic002G282400 Sobic002G282400 Sobic008G011600--Sobic002G282400 Sobic009G023200 Sobic009G023200 Sobic008G011600--Sobic009G023200 Sobic001G288800 Sobic001G288800 Sobic008G011600--Sobic001G288800 Sobic008G011600--Sobic010G041600 Sobic008G189300 Sobic008G189300 Sobic004G225500--Sobic008G189300 Sobic002G155500 Sobic002G155500 Sobic004G225500--Sobic002G155500 Sobic004G272800 Sobic004G272800 Sobic004G225500--Sobic004G272800 Sobic004G300900 Sobic004G300900 Sobic004G225500--Sobic004G300900 Sobic001G048832 Sobic001G048832 Sobic004G225500--Sobic001G048832 Sobic001G340500 Sobic001G340500 Sobic004G225500--Sobic001G340500 Sobic002G153500 Sobic002G153500 Sobic004G225500--Sobic002G153500 Sobic010G154700 Sobic010G154700 Sobic004G225500--Sobic010G154700 Sobic010G121300 Sobic010G121300 Sobic004G225500--Sobic010G121300 Sobic010G213400 Sobic010G213400 Sobic004G284500--Sobic010G213400 Sobic006G182100 Sobic006G182100 Sobic004G284500--Sobic006G182100 Sobic009G111600 Sobic009G111600 Sobic004G284500--Sobic009G111600 Sobic004G284500--Sobic002G153500 Sobic004G284500--Sobic004G272800 Sobic003G368500 Sobic003G368500 Sobic004G284500--Sobic003G368500 Sobic009G033700 Sobic009G033700 Sobic004G284500--Sobic009G033700 Sobic004G284500--Sobic001G445800 Sobic001G281400 Sobic001G281400 Sobic004G284500--Sobic001G281400 Sobic001G353600--Sobic010G041600 Sobic001G034700 Sobic001G034700 Sobic001G353600--Sobic001G034700 Sobic001G087900 Sobic001G087900 Sobic001G353600--Sobic001G087900 Sobic001G353600--Sobic004G225500 Sobic001G353600--Sobic010G121300 Sobic001G353600--Sobic004G351500 Sobic001G131400 Sobic001G131400 Sobic001G353600--Sobic001G131400 Sobic004G308400 Sobic004G308400 Sobic001G353600--Sobic004G308400 Sobic001G353600--Sobic001G536500 Sobic002G224100 Sobic002G224100 Sobic004G158901--Sobic002G224100 Sobic005G117400 Sobic005G117400 Sobic004G158901--Sobic005G117400 Sobic004G058000 Sobic004G058000 Sobic004G158901--Sobic004G058000 Sobic009G241700 Sobic009G241700 Sobic004G158901--Sobic009G241700 Sobic006G192500 Sobic006G192500 Sobic004G158901--Sobic006G192500 Sobic001G399100 Sobic001G399100 Sobic004G158901--Sobic001G399100 Sobic002G379866 Sobic002G379866 Sobic004G158901--Sobic002G379866 Sobic007G025700 Sobic007G025700 Sobic004G158901--Sobic007G025700 Sobic010G163000 Sobic010G163000 Sobic004G158901--Sobic010G163000 Sobic010G041600--Sobic001G034700 Sobic010G041600--Sobic001G281400 Sobic010G041600--Sobic004G272800 Sobic002G190900 Sobic002G190900 Sobic010G041600--Sobic002G190900 Sobic008G185400 Sobic008G185400 Sobic010G041600--Sobic008G185400 Sobic001G086300 Sobic001G086300 Sobic010G041600--Sobic001G086300 Sobic010G178200 Sobic010G178200 Sobic010G041600--Sobic010G178200 Sobic008G129400 Sobic008G129400 Sobic010G041600--Sobic008G129400 Sobic007G051000 Sobic007G051000 Sobic010G041600--Sobic007G051000 Sobic001G364500 Sobic001G364500 Sobic004G351500--Sobic001G364500 Sobic004G351500--Sobic001G087900 Sobic004G351500--Sobic002G155500 Sobic004G351500--Sobic001G034700 Sobic009G062000 Sobic009G062000 Sobic004G351500--Sobic009G062000 Sobic004G351500--Sobic004G225500 Sobic004G351500--Sobic001G536500 Sobic002G078400 Sobic002G078400 Sobic004G351500--Sobic002G078400 Sobic004G351500--Sobic008G129400 Sobic008G059200--Sobic001G281400 Sobic009G177800 Sobic009G177800 Sobic008G059200--Sobic009G177800 Sobic010G149300 Sobic010G149300 Sobic008G059200--Sobic010G149300 Sobic008G059200--Sobic001G399100 Sobic008G059200--Sobic006G173900 Sobic004G187900 Sobic004G187900 Sobic008G059200--Sobic004G187900 Sobic002G423300 Sobic002G423300 Sobic008G059200--Sobic002G423300 Sobic002G211900 Sobic002G211900 Sobic008G059200--Sobic002G211900 Sobic008G059200--Sobic001G288800
Octagon: transcription factors


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