Gene annotation
Transcriptome id Sobic.001G428200.1
Synonym Sb01g040230
Functional annotation expressed protein
UniProt C5WQ62
Pfam PF10961
Panther DB PTHR16875 PTHR16875:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G08230 : glycine-rich protein
RAP-DB (Rice) LOC_Os03g15720.2 : expressed protein
MaizeGDB (Corn) Zm00025a052805 , Zm00025a001707
Brachypodium KQK22453 , KQK22450
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G428200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G087900 expressed protein -
2 Sobic.004G351500 - -
3 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
4 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
5 Sobic.001G353600 expressed protein -
6 Sobic.003G325500 ICE-like protease p20 domain containing protein, putative, expressed -
7 Sobic.004G225500 bolA, putative, expressed K05527: BolA family transcriptional regulator, general stress-responsive regulator
8 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC
9 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
10 Sobic.004G272300 expressed protein -
11 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
12 Sobic.009G062000 ribosomal protein L51, putative, expressed K03946: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2
13 Sobic.001G538600 rhodanese, putative, expressed K18065: Cdc25 family phosphatase
14 Sobic.001G428100 S-RNase-binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
15 Sobic.008G189300 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
16 Sobic.001G005900 PPR repeat domain containing protein, putative, expressed -
17 Sobic.004G209900 non-receptor tyrosine kinase spore lysis A, putative, expressed -
18 Sobic.002G363100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
19 Sobic.001G501200 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
20 Sobic.006G281200 csAtPR5, putative, expressed -


Gene co-expression network
sample Sobic001G428200 Sobic001G428200 Sobic001G087900 Sobic001G087900 Sobic001G428200--Sobic001G087900 Sobic004G351500 Sobic004G351500 Sobic001G428200--Sobic004G351500 Sobic009G131100 Sobic009G131100 Sobic001G428200--Sobic009G131100 Sobic003G369500 Sobic003G369500 Sobic001G428200--Sobic003G369500 Sobic001G353600 Sobic001G353600 Sobic001G428200--Sobic001G353600 Sobic003G325500 Sobic003G325500 Sobic001G428200--Sobic003G325500 Sobic004G225500 Sobic004G225500 Sobic001G428200--Sobic004G225500 Sobic004G060600 Sobic004G060600 Sobic001G428200--Sobic004G060600 Sobic009G198500 Sobic009G198500 Sobic001G428200--Sobic009G198500 Sobic001G087900--Sobic004G351500 Sobic001G087900--Sobic001G428200 Sobic001G087900--Sobic001G353600 Sobic001G087900--Sobic009G131100 Sobic001G087900--Sobic009G198500 Sobic004G272300 Sobic004G272300 Sobic001G087900--Sobic004G272300 Sobic004G026400 Sobic004G026400 Sobic001G087900--Sobic004G026400 Sobic001G095632 Sobic001G095632 Sobic001G087900--Sobic001G095632 Sobic001G034700 Sobic001G034700 Sobic001G087900--Sobic001G034700 Sobic001G364500 Sobic001G364500 Sobic004G351500--Sobic001G364500 Sobic004G351500--Sobic001G087900 Sobic002G155500 Sobic002G155500 Sobic004G351500--Sobic002G155500 Sobic004G351500--Sobic001G034700 Sobic009G062000 Sobic009G062000 Sobic004G351500--Sobic009G062000 Sobic004G351500--Sobic004G225500 Sobic001G536500 Sobic001G536500 Sobic004G351500--Sobic001G536500 Sobic002G078400 Sobic002G078400 Sobic004G351500--Sobic002G078400 Sobic008G129400 Sobic008G129400 Sobic004G351500--Sobic008G129400 Sobic009G131100--Sobic001G536500 Sobic009G131100--Sobic002G078400 Sobic009G131100--Sobic004G060600 Sobic007G091000 Sobic007G091000 Sobic009G131100--Sobic007G091000 Sobic010G194900 Sobic010G194900 Sobic009G131100--Sobic010G194900 Sobic003G277000 Sobic003G277000 Sobic009G131100--Sobic003G277000 Sobic009G131100--Sobic001G087900 Sobic004G265700 Sobic004G265700 Sobic009G131100--Sobic004G265700 Sobic006G281200 Sobic006G281200 Sobic009G131100--Sobic006G281200 Sobic003G369500--Sobic004G060600 Sobic003G077900 Sobic003G077900 Sobic003G369500--Sobic003G077900 Sobic003G369500--Sobic009G131100 Sobic003G369500--Sobic001G428200 Sobic003G369500--Sobic007G091000 Sobic001G428100 Sobic001G428100 Sobic003G369500--Sobic001G428100 Sobic007G044300 Sobic007G044300 Sobic003G369500--Sobic007G044300 Sobic010G267500 Sobic010G267500 Sobic003G369500--Sobic010G267500 Sobic003G369500--Sobic003G277000 Sobic010G041600 Sobic010G041600 Sobic001G353600--Sobic010G041600 Sobic001G353600--Sobic001G034700 Sobic001G353600--Sobic001G087900 Sobic001G353600--Sobic004G225500 Sobic010G121300 Sobic010G121300 Sobic001G353600--Sobic010G121300 Sobic001G353600--Sobic004G351500 Sobic001G131400 Sobic001G131400 Sobic001G353600--Sobic001G131400 Sobic004G308400 Sobic004G308400 Sobic001G353600--Sobic004G308400 Sobic001G353600--Sobic001G536500 Sobic003G325500--Sobic001G428200 Sobic003G003000 Sobic003G003000 Sobic003G325500--Sobic003G003000 Sobic006G206700 Sobic006G206700 Sobic003G325500--Sobic006G206700 Sobic003G325500--Sobic001G087900 Sobic004G028000 Sobic004G028000 Sobic003G325500--Sobic004G028000 Sobic003G417000 Sobic003G417000 Sobic003G325500--Sobic003G417000 Sobic003G325500--Sobic003G369500 Sobic005G055000 Sobic005G055000 Sobic003G325500--Sobic005G055000 Sobic003G325500--Sobic006G281200 Sobic008G189300 Sobic008G189300 Sobic004G225500--Sobic008G189300 Sobic004G225500--Sobic002G155500 Sobic004G272800 Sobic004G272800 Sobic004G225500--Sobic004G272800 Sobic004G300900 Sobic004G300900 Sobic004G225500--Sobic004G300900 Sobic001G048832 Sobic001G048832 Sobic004G225500--Sobic001G048832 Sobic001G340500 Sobic001G340500 Sobic004G225500--Sobic001G340500 Sobic002G153500 Sobic002G153500 Sobic004G225500--Sobic002G153500 Sobic010G154700 Sobic010G154700 Sobic004G225500--Sobic010G154700 Sobic004G225500--Sobic010G121300 Sobic004G060600--Sobic003G077900 Sobic002G400000 Sobic002G400000 Sobic004G060600--Sobic002G400000 Sobic004G060600--Sobic009G131100 Sobic004G060600--Sobic001G428100 Sobic007G203700 Sobic007G203700 Sobic004G060600--Sobic007G203700 Sobic004G060600--Sobic009G198500 Sobic007G168600 Sobic007G168600 Sobic004G060600--Sobic007G168600 Sobic003G117300 Sobic003G117300 Sobic004G060600--Sobic003G117300 Sobic001G364600 Sobic001G364600 Sobic004G060600--Sobic001G364600 Sobic009G198500--Sobic004G272300 Sobic003G124800 Sobic003G124800 Sobic009G198500--Sobic003G124800 Sobic009G198500--Sobic002G400000 Sobic009G198500--Sobic007G168600 Sobic009G198500--Sobic002G078400 Sobic009G198500--Sobic004G300900 Sobic001G005900 Sobic001G005900 Sobic009G198500--Sobic001G005900 Sobic007G096700 Sobic007G096700 Sobic009G198500--Sobic007G096700 Sobic006G212100 Sobic006G212100 Sobic009G198500--Sobic006G212100
Octagon: transcription factors


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