Gene annotation
Transcriptome id Sobic.004G272300.1
Synonym Sb04g030970
Functional annotation expressed protein
UniProt C5Y0F5
Pfam -
Panther DB PTHR34196
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35585 : -
RAP-DB (Rice) LOC_Os02g47000.1 : expressed protein
MaizeGDB (Corn) Zm00025a021647
Brachypodium KQK00874 , KQK00875
Barley HORVU0Hr1G016630.2 , HORVU0Hr1G016630.3 , HORVU0Hr1G016630.1 , HORVU0Hr1G016630.4 , HORVU6Hr1G067640.4 , HORVU6Hr1G067640.1 , HORVU6Hr1G067640.3 , HORVU6Hr1G067640.2 , HORVU0Hr1G032120.1 , HORVU0Hr1G032120.2 , HORVU0Hr1G032120.3 , HORVU0Hr1G032120.4
Wheat TraesCS6B02G294500 , TraesCS6D02G247600 , TraesCS6A02G267100
Populus -


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cDNA sequences
Sobic.004G272300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G198500 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
2 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
3 Sobic.001G005900 PPR repeat domain containing protein, putative, expressed -
4 Sobic.007G168600 vesicle-associated membrane protein 727, putative, expressed K08511: vesicle-associated membrane protein 72
5 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
6 Sobic.003G124800 26S proteasome non-ATPase regulatory subunit 14, putative, expressed K03030: PSMD14, RPN11, 26S proteasome regulatory subunit N11
7 Sobic.004G351500 - -
8 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
9 Sobic.001G314500 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
10 Sobic.003G217400 zinc finger, C3HC4 type family protein, expressed -
11 Sobic.001G294000 LOL3, putative, expressed -
12 Sobic.001G051200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
K08515: vesicle-associated membrane protein 7
13 Sobic.001G502200 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5
14 Sobic.004G130900 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
15 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
16 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
17 Sobic.002G155500 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
18 Sobic.001G087900 expressed protein -
19 Sobic.009G004600 transcription initiation factor IIA gamma chain, putative, expressed K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
20 Sobic.003G386100 selenoprotein precursor, putative, expressed -


Gene co-expression network
sample Sobic004G272300 Sobic004G272300 Sobic009G198500 Sobic009G198500 Sobic004G272300--Sobic009G198500 Sobic004G300900 Sobic004G300900 Sobic004G272300--Sobic004G300900 Sobic001G005900 Sobic001G005900 Sobic004G272300--Sobic001G005900 Sobic007G168600 Sobic007G168600 Sobic004G272300--Sobic007G168600 Sobic002G078400 Sobic002G078400 Sobic004G272300--Sobic002G078400 Sobic003G124800 Sobic003G124800 Sobic004G272300--Sobic003G124800 Sobic004G351500 Sobic004G351500 Sobic004G272300--Sobic004G351500 Sobic002G400000 Sobic002G400000 Sobic004G272300--Sobic002G400000 Sobic001G314500 Sobic001G314500 Sobic004G272300--Sobic001G314500 Sobic009G198500--Sobic004G272300 Sobic009G198500--Sobic003G124800 Sobic009G198500--Sobic002G400000 Sobic009G198500--Sobic007G168600 Sobic009G198500--Sobic002G078400 Sobic009G198500--Sobic004G300900 Sobic009G198500--Sobic001G005900 Sobic007G096700 Sobic007G096700 Sobic009G198500--Sobic007G096700 Sobic006G212100 Sobic006G212100 Sobic009G198500--Sobic006G212100 Sobic004G300900--Sobic002G078400 Sobic006G141500 Sobic006G141500 Sobic004G300900--Sobic006G141500 Sobic004G300900--Sobic009G198500 Sobic001G331900 Sobic001G331900 Sobic004G300900--Sobic001G331900 Sobic004G300900--Sobic001G005900 Sobic004G225500 Sobic004G225500 Sobic004G300900--Sobic004G225500 Sobic008G058300 Sobic008G058300 Sobic004G300900--Sobic008G058300 Sobic003G115800 Sobic003G115800 Sobic004G300900--Sobic003G115800 Sobic001G445800 Sobic001G445800 Sobic004G300900--Sobic001G445800 Sobic001G005900--Sobic009G198500 Sobic004G327300 Sobic004G327300 Sobic001G005900--Sobic004G327300 Sobic001G005900--Sobic004G300900 Sobic001G048832 Sobic001G048832 Sobic001G005900--Sobic001G048832 Sobic001G005900--Sobic002G078400 Sobic001G502200 Sobic001G502200 Sobic001G005900--Sobic001G502200 Sobic004G130900 Sobic004G130900 Sobic001G005900--Sobic004G130900 Sobic001G005900--Sobic007G096700 Sobic001G501200 Sobic001G501200 Sobic001G005900--Sobic001G501200 Sobic007G168600--Sobic002G400000 Sobic007G168600--Sobic009G198500 Sobic004G086600 Sobic004G086600 Sobic007G168600--Sobic004G086600 Sobic007G168600--Sobic001G502200 Sobic003G077900 Sobic003G077900 Sobic007G168600--Sobic003G077900 Sobic010G205300 Sobic010G205300 Sobic007G168600--Sobic010G205300 Sobic007G168600--Sobic003G124800 Sobic001G461900 Sobic001G461900 Sobic007G168600--Sobic001G461900 Sobic007G168600--Sobic001G314500 Sobic002G078400--Sobic004G300900 Sobic010G065400 Sobic010G065400 Sobic002G078400--Sobic010G065400 Sobic003G362400 Sobic003G362400 Sobic002G078400--Sobic003G362400 Sobic007G091000 Sobic007G091000 Sobic002G078400--Sobic007G091000 Sobic008G132800 Sobic008G132800 Sobic002G078400--Sobic008G132800 Sobic002G078400--Sobic001G445800 Sobic002G078400--Sobic001G331900 Sobic002G078400--Sobic009G198500 Sobic010G029400 Sobic010G029400 Sobic002G078400--Sobic010G029400 Sobic003G124800--Sobic009G198500 Sobic001G439600 Sobic001G439600 Sobic003G124800--Sobic001G439600 Sobic006G232200 Sobic006G232200 Sobic003G124800--Sobic006G232200 Sobic003G124800--Sobic001G502200 Sobic007G045600 Sobic007G045600 Sobic003G124800--Sobic007G045600 Sobic001G529000 Sobic001G529000 Sobic003G124800--Sobic001G529000 Sobic003G124800--Sobic007G168600 Sobic006G150600 Sobic006G150600 Sobic003G124800--Sobic006G150600 Sobic004G066800 Sobic004G066800 Sobic003G124800--Sobic004G066800 Sobic001G364500 Sobic001G364500 Sobic004G351500--Sobic001G364500 Sobic001G087900 Sobic001G087900 Sobic004G351500--Sobic001G087900 Sobic002G155500 Sobic002G155500 Sobic004G351500--Sobic002G155500 Sobic001G034700 Sobic001G034700 Sobic004G351500--Sobic001G034700 Sobic009G062000 Sobic009G062000 Sobic004G351500--Sobic009G062000 Sobic004G351500--Sobic004G225500 Sobic001G536500 Sobic001G536500 Sobic004G351500--Sobic001G536500 Sobic004G351500--Sobic002G078400 Sobic008G129400 Sobic008G129400 Sobic004G351500--Sobic008G129400 Sobic002G400000--Sobic007G168600 Sobic002G400000--Sobic003G077900 Sobic002G400000--Sobic009G198500 Sobic002G400000--Sobic004G130900 Sobic001G433400 Sobic001G433400 Sobic002G400000--Sobic001G433400 Sobic001G395400 Sobic001G395400 Sobic002G400000--Sobic001G395400 Sobic002G400000--Sobic004G327300 Sobic009G004600 Sobic009G004600 Sobic002G400000--Sobic009G004600 Sobic010G000900 Sobic010G000900 Sobic002G400000--Sobic010G000900 Sobic001G314500--Sobic006G212100 Sobic001G314500--Sobic009G198500 Sobic001G314500--Sobic007G168600 Sobic001G388200 Sobic001G388200 Sobic001G314500--Sobic001G388200 Sobic001G314500--Sobic006G232200 Sobic001G054200 Sobic001G054200 Sobic001G314500--Sobic001G054200 Sobic001G314500--Sobic009G004600 Sobic001G314500--Sobic010G205300 Sobic003G217400 Sobic003G217400 Sobic001G314500--Sobic003G217400
Octagon: transcription factors


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