Gene annotation
Transcriptome id Sobic.004G158901.1
Synonym -
Functional annotation -
UniProt A0A1Z5RN70
Pfam PF00847
Panther DB PTHR31190
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G61890 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os04g32620.1 : ethylene-responsive transcription factor ERF114, putative, expressed
MaizeGDB (Corn) Zm00025a037299 , Zm00025a052430 , Zm00025a020464 , Zm00025a034188 , Zm00025a033098 , Zm00025a024332 , Zm00025a047609 , Zm00025a000949
Brachypodium KQK23284 , KQK04134
Barley HORVU2Hr1G018830.1 , HORVU2Hr1G018830.2 , HORVU7Hr1G055290.34 , HORVU7Hr1G055290.33 , HORVU7Hr1G055290.30 , HORVU7Hr1G055290.31 , HORVU4Hr1G077310.1 , HORVU4Hr1G077310.2 , HORVU4Hr1G077310.3 , HORVU4Hr1G077310.4 , HORVU4Hr1G077310.7 , HORVU4Hr1G077310.8 , HORVU4Hr1G077310.5 , HORVU5Hr1G080790.4 , HORVU5Hr1G080790.3 , HORVU5Hr1G080790.2 , HORVU5Hr1G080790.1 , HORVU1Hr1G082310.1
Wheat TraesCS2B02G127800 , TraesCS2A02G288000 , TraesCS2B02G304800 , TraesCS4B02G299500 , TraesCS4B02G299400 , TraesCS7B02G162100 , TraesCS5A02G314600 , TraesCS2A02G109800 , TraesCS7D02G265000 , TraesCS5B02G315500 , TraesCS2D02G286300 , TraesCS5D02G320800 , TraesCS7A02G264100 , TraesCS4D02G298400 , TraesCS5B02G315500 , TraesCS2D02G110000 , TraesCS2D02G110000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G224100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
2 Sobic.005G117400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transcription factor(PubMedID : 30367619)@WRKY72, expressed -
3 Sobic.004G058000 VQ domain containing protein, putative, expressed -
4 Sobic.009G241700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
5 Sobic.006G192500 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
6 Sobic.001G399100 peroxisomal biogenesis factor 11, putative, expressed -
7 Sobic.002G379866 - -
8 Sobic.007G025700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid transporter, putative, expressed -
9 Sobic.010G163000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
10 Sobic.003G429300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@NADPH quinone oxidoreductase, putative, expressed -
11 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
12 Sobic.008G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
13 Sobic.004G307000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
14 Sobic.002G222800 galactosyltransferase, putative, expressed -
15 Sobic.001G206400 fiber protein Fb34, putative, expressed -
16 Sobic.001G157200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid permease family protein, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
17 Sobic.003G019200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
18 Sobic.001G066000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.001G064800 expp1 protein precursor, putative, expressed -
20 Sobic.010G107100 expressed protein -


Gene co-expression network
sample Sobic004G158901 Sobic004G158901 Sobic002G224100 Sobic002G224100 Sobic004G158901--Sobic002G224100 Sobic005G117400 Sobic005G117400 Sobic004G158901--Sobic005G117400 Sobic004G058000 Sobic004G058000 Sobic004G158901--Sobic004G058000 Sobic009G241700 Sobic009G241700 Sobic004G158901--Sobic009G241700 Sobic006G192500 Sobic006G192500 Sobic004G158901--Sobic006G192500 Sobic001G399100 Sobic001G399100 Sobic004G158901--Sobic001G399100 Sobic002G379866 Sobic002G379866 Sobic004G158901--Sobic002G379866 Sobic007G025700 Sobic007G025700 Sobic004G158901--Sobic007G025700 Sobic010G163000 Sobic010G163000 Sobic004G158901--Sobic010G163000 Sobic002G224100--Sobic004G158901 Sobic003G429300 Sobic003G429300 Sobic002G224100--Sobic003G429300 Sobic002G224100--Sobic007G025700 Sobic004G307000 Sobic004G307000 Sobic002G224100--Sobic004G307000 Sobic003G189200 Sobic003G189200 Sobic002G224100--Sobic003G189200 Sobic002G224100--Sobic005G117400 Sobic002G224100--Sobic002G379866 Sobic007G171000 Sobic007G171000 Sobic002G224100--Sobic007G171000 Sobic008G111100 Sobic008G111100 Sobic002G224100--Sobic008G111100 Sobic005G117400--Sobic004G158901 Sobic007G125900 Sobic007G125900 Sobic005G117400--Sobic007G125900 Sobic005G117400--Sobic004G058000 Sobic002G249000 Sobic002G249000 Sobic005G117400--Sobic002G249000 Sobic003G348400 Sobic003G348400 Sobic005G117400--Sobic003G348400 Sobic004G050000 Sobic004G050000 Sobic005G117400--Sobic004G050000 Sobic003G232900 Sobic003G232900 Sobic005G117400--Sobic003G232900 Sobic005G117400--Sobic007G025700 Sobic010G224200 Sobic010G224200 Sobic005G117400--Sobic010G224200 Sobic010G107100 Sobic010G107100 Sobic004G058000--Sobic010G107100 Sobic004G058000--Sobic001G399100 Sobic004G058000--Sobic005G117400 Sobic004G058000--Sobic010G224200 Sobic004G058000--Sobic009G241700 Sobic004G058000--Sobic004G158901 Sobic003G019200 Sobic003G019200 Sobic004G058000--Sobic003G019200 Sobic004G058000--Sobic004G050000 Sobic004G058000--Sobic002G249000 Sobic009G241700--Sobic010G107100 Sobic005G211400 Sobic005G211400 Sobic009G241700--Sobic005G211400 Sobic009G241700--Sobic004G058000 Sobic009G241700--Sobic004G158901 Sobic007G098400 Sobic007G098400 Sobic009G241700--Sobic007G098400 Sobic001G403700 Sobic001G403700 Sobic009G241700--Sobic001G403700 Sobic009G241700--Sobic001G399100 Sobic001G012800 Sobic001G012800 Sobic009G241700--Sobic001G012800 Sobic009G111600 Sobic009G111600 Sobic009G241700--Sobic009G111600 Sobic006G192500--Sobic001G399100 Sobic005G228000 Sobic005G228000 Sobic006G192500--Sobic005G228000 Sobic002G374100 Sobic002G374100 Sobic006G192500--Sobic002G374100 Sobic010G062800 Sobic010G062800 Sobic006G192500--Sobic010G062800 Sobic001G206400 Sobic001G206400 Sobic006G192500--Sobic001G206400 Sobic010G204300 Sobic010G204300 Sobic006G192500--Sobic010G204300 Sobic001G147200 Sobic001G147200 Sobic006G192500--Sobic001G147200 Sobic002G245800 Sobic002G245800 Sobic006G192500--Sobic002G245800 Sobic006G192500--Sobic010G107100 Sobic009G033700 Sobic009G033700 Sobic001G399100--Sobic009G033700 Sobic009G046600 Sobic009G046600 Sobic001G399100--Sobic009G046600 Sobic001G399100--Sobic010G107100 Sobic004G186500 Sobic004G186500 Sobic001G399100--Sobic004G186500 Sobic001G399100--Sobic003G019200 Sobic009G200700 Sobic009G200700 Sobic001G399100--Sobic009G200700 Sobic005G028700 Sobic005G028700 Sobic001G399100--Sobic005G028700 Sobic005G229700 Sobic005G229700 Sobic001G399100--Sobic005G229700 Sobic010G086200 Sobic010G086200 Sobic001G399100--Sobic010G086200 Sobic003G146100 Sobic003G146100 Sobic002G379866--Sobic003G146100 Sobic001G157200 Sobic001G157200 Sobic002G379866--Sobic001G157200 Sobic002G222800 Sobic002G222800 Sobic002G379866--Sobic002G222800 Sobic001G074200 Sobic001G074200 Sobic002G379866--Sobic001G074200 Sobic002G118600 Sobic002G118600 Sobic002G379866--Sobic002G118600 Sobic006G078400 Sobic006G078400 Sobic002G379866--Sobic006G078400 Sobic002G379866--Sobic004G158901 Sobic002G379866--Sobic001G147200 Sobic002G379866--Sobic002G224100 Sobic004G304400 Sobic004G304400 Sobic007G025700--Sobic004G304400 Sobic007G025700--Sobic002G224100 Sobic007G025700--Sobic004G307000 Sobic007G025700--Sobic008G111100 Sobic007G025700--Sobic003G189200 Sobic007G025700--Sobic005G117400 Sobic009G177800 Sobic009G177800 Sobic007G025700--Sobic009G177800 Sobic007G025700--Sobic004G158901 Sobic001G474200 Sobic001G474200 Sobic007G025700--Sobic001G474200 Sobic010G102150 Sobic010G102150 Sobic010G163000--Sobic010G102150 Sobic010G163000--Sobic005G229700 Sobic001G454100 Sobic001G454100 Sobic010G163000--Sobic001G454100 Sobic010G163000--Sobic003G146100 Sobic010G163000--Sobic010G107100 Sobic010G163000--Sobic001G399100 Sobic005G109000 Sobic005G109000 Sobic010G163000--Sobic005G109000 Sobic001G195100 Sobic001G195100 Sobic010G163000--Sobic001G195100 Sobic010G163000--Sobic004G158901
Octagon: transcription factors


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