Gene annotation
Transcriptome id Sobic.004G058000.1
Synonym Sb04g004860
Functional annotation VQ domain containing protein, putative, expressed
UniProt A0A1Z5RL41
Pfam -
Panther DB PTHR33179 PTHR33179:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39720 : VQ motif-containing protein
RAP-DB (Rice) LOC_Os02g07690.1 : VQ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a019105 , Zm00025a048807 , Zm00025a034783
Brachypodium KQJ98225
Barley HORVU6Hr1G031640.3 , HORVU6Hr1G031640.1
Wheat -
Populus -


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cDNA sequences
Sobic.004G058000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G107100 expressed protein -
2 Sobic.001G399100 peroxisomal biogenesis factor 11, putative, expressed -
3 Sobic.005G117400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transcription factor(PubMedID : 30367619)@WRKY72, expressed -
4 Sobic.010G224200 MYB family transcription factor, putative, expressed -
5 Sobic.009G241700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
6 Sobic.004G158901 - -
7 Sobic.003G019200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
8 Sobic.004G050000 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
9 Sobic.002G249000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
10 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
11 Sobic.009G111600 expressed protein -
12 Sobic.002G423300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.006G204300 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transcription factor TF2, putative, expressed -
14 Sobic.001G330700 NAD dependent epimerase/dehydratase family protein, putative, expressed -
15 Sobic.006G140200 sialyltransferase family domain containing protein, expressed -
16 Sobic.001G454100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
17 Sobic.006G192500 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
18 Sobic.003G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pleiotropic drug resistance protein, putative, expressed -
19 Sobic.001G066000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.002G222800 galactosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic004G058000 Sobic004G058000 Sobic010G107100 Sobic010G107100 Sobic004G058000--Sobic010G107100 Sobic001G399100 Sobic001G399100 Sobic004G058000--Sobic001G399100 Sobic005G117400 Sobic005G117400 Sobic004G058000--Sobic005G117400 Sobic010G224200 Sobic010G224200 Sobic004G058000--Sobic010G224200 Sobic009G241700 Sobic009G241700 Sobic004G058000--Sobic009G241700 Sobic004G158901 Sobic004G158901 Sobic004G058000--Sobic004G158901 Sobic003G019200 Sobic003G019200 Sobic004G058000--Sobic003G019200 Sobic004G050000 Sobic004G050000 Sobic004G058000--Sobic004G050000 Sobic002G249000 Sobic002G249000 Sobic004G058000--Sobic002G249000 Sobic010G107100--Sobic001G399100 Sobic010G107100--Sobic004G058000 Sobic005G229700 Sobic005G229700 Sobic010G107100--Sobic005G229700 Sobic009G200700 Sobic009G200700 Sobic010G107100--Sobic009G200700 Sobic003G192100 Sobic003G192100 Sobic010G107100--Sobic003G192100 Sobic009G143400 Sobic009G143400 Sobic010G107100--Sobic009G143400 Sobic002G423300 Sobic002G423300 Sobic010G107100--Sobic002G423300 Sobic010G107100--Sobic009G241700 Sobic006G230500 Sobic006G230500 Sobic010G107100--Sobic006G230500 Sobic009G033700 Sobic009G033700 Sobic001G399100--Sobic009G033700 Sobic009G046600 Sobic009G046600 Sobic001G399100--Sobic009G046600 Sobic001G399100--Sobic010G107100 Sobic004G186500 Sobic004G186500 Sobic001G399100--Sobic004G186500 Sobic001G399100--Sobic003G019200 Sobic001G399100--Sobic009G200700 Sobic005G028700 Sobic005G028700 Sobic001G399100--Sobic005G028700 Sobic001G399100--Sobic005G229700 Sobic010G086200 Sobic010G086200 Sobic001G399100--Sobic010G086200 Sobic005G117400--Sobic004G158901 Sobic007G125900 Sobic007G125900 Sobic005G117400--Sobic007G125900 Sobic005G117400--Sobic004G058000 Sobic005G117400--Sobic002G249000 Sobic003G348400 Sobic003G348400 Sobic005G117400--Sobic003G348400 Sobic005G117400--Sobic004G050000 Sobic003G232900 Sobic003G232900 Sobic005G117400--Sobic003G232900 Sobic007G025700 Sobic007G025700 Sobic005G117400--Sobic007G025700 Sobic005G117400--Sobic010G224200 Sobic010G224200--Sobic003G019200 Sobic010G224200--Sobic002G249000 Sobic009G177800 Sobic009G177800 Sobic010G224200--Sobic009G177800 Sobic010G224200--Sobic004G058000 Sobic008G111100 Sobic008G111100 Sobic010G224200--Sobic008G111100 Sobic010G224200--Sobic002G423300 Sobic004G307000 Sobic004G307000 Sobic010G224200--Sobic004G307000 Sobic010G224200--Sobic004G050000 Sobic010G224200--Sobic010G107100 Sobic009G241700--Sobic010G107100 Sobic005G211400 Sobic005G211400 Sobic009G241700--Sobic005G211400 Sobic009G241700--Sobic004G058000 Sobic009G241700--Sobic004G158901 Sobic007G098400 Sobic007G098400 Sobic009G241700--Sobic007G098400 Sobic001G403700 Sobic001G403700 Sobic009G241700--Sobic001G403700 Sobic009G241700--Sobic001G399100 Sobic001G012800 Sobic001G012800 Sobic009G241700--Sobic001G012800 Sobic009G111600 Sobic009G111600 Sobic009G241700--Sobic009G111600 Sobic002G224100 Sobic002G224100 Sobic004G158901--Sobic002G224100 Sobic004G158901--Sobic005G117400 Sobic004G158901--Sobic004G058000 Sobic004G158901--Sobic009G241700 Sobic006G192500 Sobic006G192500 Sobic004G158901--Sobic006G192500 Sobic004G158901--Sobic001G399100 Sobic002G379866 Sobic002G379866 Sobic004G158901--Sobic002G379866 Sobic004G158901--Sobic007G025700 Sobic010G163000 Sobic010G163000 Sobic004G158901--Sobic010G163000 Sobic010G246000 Sobic010G246000 Sobic003G019200--Sobic010G246000 Sobic001G147200 Sobic001G147200 Sobic003G019200--Sobic001G147200 Sobic003G019200--Sobic009G200700 Sobic003G019200--Sobic001G399100 Sobic007G198100 Sobic007G198100 Sobic003G019200--Sobic007G198100 Sobic002G374100 Sobic002G374100 Sobic003G019200--Sobic002G374100 Sobic003G429300 Sobic003G429300 Sobic003G019200--Sobic003G429300 Sobic003G019200--Sobic010G224200 Sobic003G019200--Sobic008G111100 Sobic009G043600 Sobic009G043600 Sobic004G050000--Sobic009G043600 Sobic001G066000 Sobic001G066000 Sobic004G050000--Sobic001G066000 Sobic004G049900 Sobic004G049900 Sobic004G050000--Sobic004G049900 Sobic004G277000 Sobic004G277000 Sobic004G050000--Sobic004G277000 Sobic002G267500 Sobic002G267500 Sobic004G050000--Sobic002G267500 Sobic006G121500 Sobic006G121500 Sobic004G050000--Sobic006G121500 Sobic002G090200 Sobic002G090200 Sobic004G050000--Sobic002G090200 Sobic004G050000--Sobic009G177800 Sobic006G108400 Sobic006G108400 Sobic004G050000--Sobic006G108400 Sobic002G249000--Sobic004G277000 Sobic001G010400 Sobic001G010400 Sobic002G249000--Sobic001G010400 Sobic002G249000--Sobic004G050000 Sobic009G003900 Sobic009G003900 Sobic002G249000--Sobic009G003900 Sobic002G249000--Sobic010G224200 Sobic002G249000--Sobic005G117400 Sobic010G176700 Sobic010G176700 Sobic002G249000--Sobic010G176700 Sobic002G180600 Sobic002G180600 Sobic002G249000--Sobic002G180600 Sobic002G249000--Sobic004G307000
Octagon: transcription factors


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