Gene annotation
Transcriptome id Sobic.003G215800.1,Sobic.003G215800.2
Synonym ATABCG40, ABCG40, Sb03g027480, PDR12, ATPDR12
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
pleiotropic drug resistance protein, putative, expressed
UniProt A0A1W0VYF9 , A0A1B6Q4N3
Pfam PF14510 PF08370 PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF273
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT1G15520 : pleiotropic drug resistance 12
RAP-DB (Rice) LOC_Os01g42380.1 : pleiotropic drug resistance protein, putative, expressed
MaizeGDB (Corn) Zm00025a028685 , Zm00025a028684 , Zm00025a038480 , Zm00025a034596
Brachypodium PNT72368 , PNT75619 , PNT75618 , PNT75624 , PNT75622 , PNT75623 , PNT75620 , PNT75621 , KQK03837 , KQJ89875 , KQJ89876 , KQK08666
Barley HORVU3Hr1G053350.9 , HORVU3Hr1G053350.8 , HORVU3Hr1G071470.5 , HORVU3Hr1G071470.1 , HORVU4Hr1G017090.1 , HORVU3Hr1G053380.8 , HORVU3Hr1G053380.9 , HORVU3Hr1G053380.2 , HORVU3Hr1G053380.3 , HORVU3Hr1G053380.1 , HORVU3Hr1G053380.6 , HORVU3Hr1G053380.7 , HORVU3Hr1G053380.4 , HORVU3Hr1G053380.5 , HORVU3Hr1G053380.10 , HORVU3Hr1G053380.11 , HORVU3Hr1G053380.12 , HORVU3Hr1G053380.13 , HORVU3Hr1G053380.14 , HORVU3Hr1G053380.15 , HORVU3Hr1G053380.16 , HORVU5Hr1G056280.11 , HORVU5Hr1G056280.12 , HORVU5Hr1G056280.13 , HORVU5Hr1G056280.14 , HORVU5Hr1G056280.15 , HORVU5Hr1G056280.24 , HORVU5Hr1G056280.27 , HORVU5Hr1G056280.26 , HORVU5Hr1G056280.21 , HORVU5Hr1G056280.20 , HORVU5Hr1G056280.29 , HORVU3Hr1G053350.40 , HORVU5Hr1G056280.38 , HORVU5Hr1G056280.39 , HORVU5Hr1G056280.30 , HORVU5Hr1G056280.31 , HORVU5Hr1G056280.36 , HORVU5Hr1G056280.37 , HORVU5Hr1G056280.35 , HORVU3Hr1G053350.39 , HORVU3Hr1G053350.38 , HORVU3Hr1G053350.37 , HORVU3Hr1G053350.36 , HORVU3Hr1G053350.35 , HORVU3Hr1G053350.34 , HORVU3Hr1G053350.33 , HORVU3Hr1G053350.32 , HORVU3Hr1G053350.31 , HORVU3Hr1G053350.30 , HORVU5Hr1G056280.43 , HORVU3Hr1G053350.28 , HORVU3Hr1G053350.29 , HORVU3Hr1G053350.25 , HORVU3Hr1G053350.26 , HORVU3Hr1G053350.27 , HORVU3Hr1G053350.20 , HORVU3Hr1G053350.21 , HORVU3Hr1G053350.22 , HORVU3Hr1G053350.23 , HORVU3Hr1G071470.11 , HORVU3Hr1G053350.11 , HORVU3Hr1G053350.10 , HORVU3Hr1G053350.13 , HORVU3Hr1G053350.12 , HORVU3Hr1G053350.15 , HORVU3Hr1G053350.14 , HORVU3Hr1G053350.17 , HORVU3Hr1G053350.16 , HORVU3Hr1G053350.19 , HORVU3Hr1G053350.18 , HORVU3Hr1G053350.5 , HORVU3Hr1G053350.4 , HORVU3Hr1G053350.7 , HORVU3Hr1G053350.6 , HORVU3Hr1G053350.1 , HORVU3Hr1G053350.3 , HORVU3Hr1G053350.2 , HORVU5Hr1G056280.6 , HORVU5Hr1G056280.7 , HORVU5Hr1G056280.8 , HORVU7Hr1G092510.7
Wheat TraesCS2D02G130000 , TraesCS3D02G272200 , TraesCS2A02G127800 , TraesCS3A02G218000 , TraesCS3A02G218000 , TraesCS3A02G218000 , TraesCS5B02G183500 , TraesCS5B02G183500 , TraesCS5B02G183500 , TraesCS5B02G183500 , TraesCS3B02G248500 , TraesCS2A02G483300 , TraesCS3D02G272200 , TraesCS5D02G190600 , TraesCS5D02G190600 , TraesCS5D02G190600 , TraesCS3D02G234300 , TraesCS3D02G234300 , TraesCS3B02G248400 , TraesCS6A02G178500 , TraesCS6D02G166100 , TraesCS3A02G217900 , TraesCS3A02G272800 , TraesCS3A02G272800 , TraesCS5A02G185500 , TraesCS5A02G185500 , TraesCS3D02G234400 , TraesCS6B02G205900 , TraesCS2B02G606700 , TraesCS2B02G606700
Populus PNT46280 , PNT46279


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G401300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PR10(PubMedID : 20078779)@accumulation during fungal development(PubMedID : 10356799)@pathogenesis-related Bet v I family protein, putative, expressed -
2 Sobic.005G137200 only inducible by pathogen inoculation(PubMedID : 20529887)@Chalcone synthase 7 (Os)(PubMedID : 27208977)@SbCHS1 to SbCHS7 (AF152548-AF152554) are highly conserved (at least 97.5% sequence identity at amino acid level) and closely related to the maize (Zea mays) C2 and Whp genes encoding CHS enzymes.(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
3 Sobic.002G090200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytidine deaminase, putative, expressed -
4 Sobic.001G454100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
5 Sobic.008G034500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phytosulfokines precursor, putative, expressed -
6 Sobic.001G466000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
7 Sobic.010G107100 expressed protein -
8 Sobic.004G058000 VQ domain containing protein, putative, expressed -
9 Sobic.010G004200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 domain containing protein, expressed -
10 Sobic.004G277000 purine permease, putative, expressed -
11 Sobic.009G041000 sucrose phosphate phos- phatase(PubMedID : 26616172)@sucrose-phosphatase, putative, expressed -
12 Sobic.001G400700 pathogenesis-related Bet v I family protein, putative, expressed -
13 Sobic.005G136300 chalcone synthase(PubMedID : 26317421)@only inducible by pathogen inoculation(PubMedID : 20529887)@SbCHS1 to SbCHS7 (AF152548-AF152554) are highly conserved (at least 97.5% sequence identity at amino acid level) and closely related to the maize (Zea mays) C2 and Whp genes encoding CHS enzymes.(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
14 Sobic.004G050000 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
15 Sobic.008G191600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@vesicle-associated membrane protein, putative, expressed -
16 Sobic.003G425850 - K00799: GST, glutathione S-transferase
17 Sobic.004G276100 expressed protein -
18 Sobic.004G304400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
19 Sobic.003G349600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS1-14 - C2H2 zinc finger protein, expressed -
20 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -


Gene co-expression network
sample Sobic003G215800 Sobic003G215800 Sobic001G401300 Sobic001G401300 Sobic003G215800--Sobic001G401300 Sobic005G137200 Sobic005G137200 Sobic003G215800--Sobic005G137200 Sobic002G090200 Sobic002G090200 Sobic003G215800--Sobic002G090200 Sobic001G454100 Sobic001G454100 Sobic003G215800--Sobic001G454100 Sobic008G034500 Sobic008G034500 Sobic003G215800--Sobic008G034500 Sobic001G466000 Sobic001G466000 Sobic003G215800--Sobic001G466000 Sobic010G107100 Sobic010G107100 Sobic003G215800--Sobic010G107100 Sobic004G058000 Sobic004G058000 Sobic003G215800--Sobic004G058000 Sobic010G004200 Sobic010G004200 Sobic003G215800--Sobic010G004200 Sobic001G401200 Sobic001G401200 Sobic001G401300--Sobic001G401200 Sobic001G400700 Sobic001G400700 Sobic001G401300--Sobic001G400700 Sobic001G401300--Sobic008G034500 Sobic001G401300--Sobic003G215800 Sobic002G333900 Sobic002G333900 Sobic001G401300--Sobic002G333900 Sobic008G191600 Sobic008G191600 Sobic001G401300--Sobic008G191600 Sobic001G247900 Sobic001G247900 Sobic001G401300--Sobic001G247900 Sobic006G039700 Sobic006G039700 Sobic001G401300--Sobic006G039700 Sobic009G043600 Sobic009G043600 Sobic001G401300--Sobic009G043600 Sobic005G137100 Sobic005G137100 Sobic005G137200--Sobic005G137100 Sobic005G136300 Sobic005G136300 Sobic005G137200--Sobic005G136300 Sobic005G137000 Sobic005G137000 Sobic005G137200--Sobic005G137000 Sobic005G137200--Sobic003G215800 Sobic001G066000 Sobic001G066000 Sobic005G137200--Sobic001G066000 Sobic005G137200--Sobic001G401300 Sobic005G137200--Sobic010G004200 Sobic005G117400 Sobic005G117400 Sobic005G137200--Sobic005G117400 Sobic005G137200--Sobic001G454100 Sobic006G218300 Sobic006G218300 Sobic002G090200--Sobic006G218300 Sobic004G050000 Sobic004G050000 Sobic002G090200--Sobic004G050000 Sobic004G074500 Sobic004G074500 Sobic002G090200--Sobic004G074500 Sobic006G165400 Sobic006G165400 Sobic002G090200--Sobic006G165400 Sobic001G026900 Sobic001G026900 Sobic002G090200--Sobic001G026900 Sobic004G308000 Sobic004G308000 Sobic002G090200--Sobic004G308000 Sobic004G277000 Sobic004G277000 Sobic002G090200--Sobic004G277000 Sobic002G090200--Sobic003G215800 Sobic002G249000 Sobic002G249000 Sobic002G090200--Sobic002G249000 Sobic001G454100--Sobic010G107100 Sobic010G163000 Sobic010G163000 Sobic001G454100--Sobic010G163000 Sobic005G229700 Sobic005G229700 Sobic001G454100--Sobic005G229700 Sobic006G216700 Sobic006G216700 Sobic001G454100--Sobic006G216700 Sobic003G192100 Sobic003G192100 Sobic001G454100--Sobic003G192100 Sobic003G285500 Sobic003G285500 Sobic001G454100--Sobic003G285500 Sobic006G158600 Sobic006G158600 Sobic001G454100--Sobic006G158600 Sobic001G454100--Sobic003G215800 Sobic008G059200 Sobic008G059200 Sobic001G454100--Sobic008G059200 Sobic008G034500--Sobic001G401300 Sobic003G152100 Sobic003G152100 Sobic008G034500--Sobic003G152100 Sobic002G367400 Sobic002G367400 Sobic008G034500--Sobic002G367400 Sobic008G034500--Sobic002G333900 Sobic008G034500--Sobic001G400700 Sobic008G034500--Sobic001G466000 Sobic002G328300 Sobic002G328300 Sobic008G034500--Sobic002G328300 Sobic003G349600 Sobic003G349600 Sobic008G034500--Sobic003G349600 Sobic009G143400 Sobic009G143400 Sobic008G034500--Sobic009G143400 Sobic001G466000--Sobic002G367400 Sobic001G466000--Sobic003G349600 Sobic009G254900 Sobic009G254900 Sobic001G466000--Sobic009G254900 Sobic001G466000--Sobic009G143400 Sobic005G063100 Sobic005G063100 Sobic001G466000--Sobic005G063100 Sobic009G234100 Sobic009G234100 Sobic001G466000--Sobic009G234100 Sobic002G336600 Sobic002G336600 Sobic001G466000--Sobic002G336600 Sobic008G136400 Sobic008G136400 Sobic001G466000--Sobic008G136400 Sobic003G116800 Sobic003G116800 Sobic001G466000--Sobic003G116800 Sobic001G399100 Sobic001G399100 Sobic010G107100--Sobic001G399100 Sobic010G107100--Sobic004G058000 Sobic010G107100--Sobic005G229700 Sobic009G200700 Sobic009G200700 Sobic010G107100--Sobic009G200700 Sobic010G107100--Sobic003G192100 Sobic010G107100--Sobic009G143400 Sobic002G423300 Sobic002G423300 Sobic010G107100--Sobic002G423300 Sobic009G241700 Sobic009G241700 Sobic010G107100--Sobic009G241700 Sobic006G230500 Sobic006G230500 Sobic010G107100--Sobic006G230500 Sobic004G058000--Sobic010G107100 Sobic004G058000--Sobic001G399100 Sobic004G058000--Sobic005G117400 Sobic010G224200 Sobic010G224200 Sobic004G058000--Sobic010G224200 Sobic004G058000--Sobic009G241700 Sobic004G158901 Sobic004G158901 Sobic004G058000--Sobic004G158901 Sobic003G019200 Sobic003G019200 Sobic004G058000--Sobic003G019200 Sobic004G058000--Sobic004G050000 Sobic004G058000--Sobic002G249000 Sobic004G311750 Sobic004G311750 Sobic010G004200--Sobic004G311750 Sobic010G004200--Sobic001G401300 Sobic001G260000 Sobic001G260000 Sobic010G004200--Sobic001G260000 Sobic010G004200--Sobic005G136300 Sobic010G004200--Sobic003G215800 Sobic008G054150 Sobic008G054150 Sobic010G004200--Sobic008G054150 Sobic010G004200--Sobic003G349600 Sobic010G004200--Sobic005G137200 Sobic004G037000 Sobic004G037000 Sobic010G004200--Sobic004G037000
Octagon: transcription factors


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