Gene annotation
Transcriptome id Sobic.008G191600.1
Synonym Sb08g023180, VAMP726, ATVAMP726
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
vesicle-associated membrane protein, putative, expressed
UniProt A0A1B6PEM2
Pfam PF13774 PF00957
Panther DB PTHR21136 PTHR21136:SF99
NCBI CDD KOG0859; Synaptobrevin/VAMP-like protein
KEGG Orthology -
Gene Ontology GO:0016192; vesicle-mediated transport GO:0016021integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G04760 : vesicle-associated membrane protein 726
RAP-DB (Rice) LOC_Os12g44250.1 : vesicle-associated membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a004884
Brachypodium -
Barley -
Wheat TraesCS5D02G003800 , TraesCS5A02G003100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G050100 Cupin domain containing protein, expressed -
2 Sobic.003G192100 expressed protein -
3 Sobic.008G032100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.002G312900 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
5 Sobic.001G400700 pathogenesis-related Bet v I family protein, putative, expressed -
6 Sobic.001G247900 "Protein chitinase 2, putative, (Os)"(PubMedID : 27208977)@chitinase 2, putative, expressed -
7 Sobic.007G151300 Cupin domain containing protein, expressed -
8 Sobic.004G101300 expressed protein -
9 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.002G329000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-ld.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
11 Sobic.001G400800 pathogenesis-related Bet v I family protein, putative, expressed -
12 Sobic.003G251600 S-locus-like receptor protein kinase, putative, expressed -
13 Sobic.001G401300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PR10(PubMedID : 20078779)@accumulation during fungal development(PubMedID : 10356799)@pathogenesis-related Bet v I family protein, putative, expressed -
14 Sobic.003G152100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed -
15 Sobic.010G185000 VQ domain containing protein, putative, expressed -
16 Sobic.003G417350 - -
17 Sobic.010G176600 - -
18 Sobic.010G195500 reductase, putative, expressed -
19 Sobic.006G092500 expressed protein -
20 Sobic.010G268400 eukaryotic aspartyl protease domain containing protein, expressed -


Gene co-expression network
sample Sobic008G191600 Sobic008G191600 Sobic001G050100 Sobic001G050100 Sobic008G191600--Sobic001G050100 Sobic003G192100 Sobic003G192100 Sobic008G191600--Sobic003G192100 Sobic008G032100 Sobic008G032100 Sobic008G191600--Sobic008G032100 Sobic002G312900 Sobic002G312900 Sobic008G191600--Sobic002G312900 Sobic001G400700 Sobic001G400700 Sobic008G191600--Sobic001G400700 Sobic001G247900 Sobic001G247900 Sobic008G191600--Sobic001G247900 Sobic007G151300 Sobic007G151300 Sobic008G191600--Sobic007G151300 Sobic004G101300 Sobic004G101300 Sobic008G191600--Sobic004G101300 Sobic010G270500 Sobic010G270500 Sobic008G191600--Sobic010G270500 Sobic005G063100 Sobic005G063100 Sobic001G050100--Sobic005G063100 Sobic001G367600 Sobic001G367600 Sobic001G050100--Sobic001G367600 Sobic002G140400 Sobic002G140400 Sobic001G050100--Sobic002G140400 Sobic005G018700 Sobic005G018700 Sobic001G050100--Sobic005G018700 Sobic004G237800 Sobic004G237800 Sobic001G050100--Sobic004G237800 Sobic006G103000 Sobic006G103000 Sobic001G050100--Sobic006G103000 Sobic001G192200 Sobic001G192200 Sobic001G050100--Sobic001G192200 Sobic005G091500 Sobic005G091500 Sobic001G050100--Sobic005G091500 Sobic010G176600 Sobic010G176600 Sobic001G050100--Sobic010G176600 Sobic003G192100--Sobic005G018700 Sobic003G192100--Sobic004G101300 Sobic003G037500 Sobic003G037500 Sobic003G192100--Sobic003G037500 Sobic007G155000 Sobic007G155000 Sobic003G192100--Sobic007G155000 Sobic002G245100 Sobic002G245100 Sobic003G192100--Sobic002G245100 Sobic001G231700 Sobic001G231700 Sobic003G192100--Sobic001G231700 Sobic003G192100--Sobic001G050100 Sobic003G192100--Sobic001G367600 Sobic004G340900 Sobic004G340900 Sobic003G192100--Sobic004G340900 Sobic010G009300 Sobic010G009300 Sobic008G032100--Sobic010G009300 Sobic005G084600 Sobic005G084600 Sobic008G032100--Sobic005G084600 Sobic007G087200 Sobic007G087200 Sobic008G032100--Sobic007G087200 Sobic001G177800 Sobic001G177800 Sobic008G032100--Sobic001G177800 Sobic005G195301 Sobic005G195301 Sobic008G032100--Sobic005G195301 Sobic002G187500 Sobic002G187500 Sobic008G032100--Sobic002G187500 Sobic009G077800 Sobic009G077800 Sobic008G032100--Sobic009G077800 Sobic003G113700 Sobic003G113700 Sobic008G032100--Sobic003G113700 Sobic005G206601 Sobic005G206601 Sobic008G032100--Sobic005G206601 Sobic004G176600 Sobic004G176600 Sobic002G312900--Sobic004G176600 Sobic008G128900 Sobic008G128900 Sobic002G312900--Sobic008G128900 Sobic010G195500 Sobic010G195500 Sobic002G312900--Sobic010G195500 Sobic005G043000 Sobic005G043000 Sobic002G312900--Sobic005G043000 Sobic003G416300 Sobic003G416300 Sobic002G312900--Sobic003G416300 Sobic006G059700 Sobic006G059700 Sobic002G312900--Sobic006G059700 Sobic003G366600 Sobic003G366600 Sobic002G312900--Sobic003G366600 Sobic001G147900 Sobic001G147900 Sobic002G312900--Sobic001G147900 Sobic002G312900--Sobic005G084600 Sobic001G400800 Sobic001G400800 Sobic001G400700--Sobic001G400800 Sobic005G101800 Sobic005G101800 Sobic001G400700--Sobic005G101800 Sobic004G245800 Sobic004G245800 Sobic001G400700--Sobic004G245800 Sobic003G286600 Sobic003G286600 Sobic001G400700--Sobic003G286600 Sobic001G400700--Sobic001G177800 Sobic001G400700--Sobic010G176600 Sobic003G252800 Sobic003G252800 Sobic001G400700--Sobic003G252800 Sobic002G183200 Sobic002G183200 Sobic001G400700--Sobic002G183200 Sobic006G099900 Sobic006G099900 Sobic001G400700--Sobic006G099900 Sobic001G247900--Sobic008G191600 Sobic001G401300 Sobic001G401300 Sobic001G247900--Sobic001G401300 Sobic001G247900--Sobic001G400700 Sobic001G247900--Sobic001G400800 Sobic002G333900 Sobic002G333900 Sobic001G247900--Sobic002G333900 Sobic003G152100 Sobic003G152100 Sobic001G247900--Sobic003G152100 Sobic009G072900 Sobic009G072900 Sobic001G247900--Sobic009G072900 Sobic006G243600 Sobic006G243600 Sobic001G247900--Sobic006G243600 Sobic001G247900--Sobic001G192200 Sobic007G151300--Sobic010G270500 Sobic002G247600 Sobic002G247600 Sobic007G151300--Sobic002G247600 Sobic010G185000 Sobic010G185000 Sobic007G151300--Sobic010G185000 Sobic003G007600 Sobic003G007600 Sobic007G151300--Sobic003G007600 Sobic007G151300--Sobic006G243600 Sobic007G151300--Sobic001G050100 Sobic004G159733 Sobic004G159733 Sobic007G151300--Sobic004G159733 Sobic002G017800 Sobic002G017800 Sobic007G151300--Sobic002G017800 Sobic001G462700 Sobic001G462700 Sobic007G151300--Sobic001G462700 Sobic001G389000 Sobic001G389000 Sobic004G101300--Sobic001G389000 Sobic002G190900 Sobic002G190900 Sobic004G101300--Sobic002G190900 Sobic004G101300--Sobic007G087200 Sobic004G101300--Sobic003G192100 Sobic010G259600 Sobic010G259600 Sobic004G101300--Sobic010G259600 Sobic004G101300--Sobic004G340900 Sobic004G101300--Sobic005G018700 Sobic009G111000 Sobic009G111000 Sobic004G101300--Sobic009G111000 Sobic009G159400 Sobic009G159400 Sobic004G101300--Sobic009G159400 Sobic010G270500--Sobic003G007600 Sobic010G270500--Sobic007G151300 Sobic003G299300 Sobic003G299300 Sobic010G270500--Sobic003G299300 Sobic001G304100 Sobic001G304100 Sobic010G270500--Sobic001G304100 Sobic010G270500--Sobic002G017800 Sobic010G270500--Sobic009G111000 Sobic010G270500--Sobic005G018700 Sobic010G270500--Sobic006G103000 Sobic010G270500--Sobic001G050100
Octagon: transcription factors


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