Gene annotation
Transcriptome id Sobic.001G247900.1
Synonym Sb01g021920
Functional annotation "Protein chitinase 2, putative, (Os)" (PubMedID : 27208977)
chitinase 2, putative, expressed
UniProt C5X1L1
Pfam PF00704
Panther DB PTHR11177 PTHR11177:SF186
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g28050.1 : chitinase 2, putative, expressed
MaizeGDB (Corn) Zm00025a006914
Brachypodium KQJ96725
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G191600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@vesicle-associated membrane protein, putative, expressed -
2 Sobic.001G401300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PR10(PubMedID : 20078779)@accumulation during fungal development(PubMedID : 10356799)@pathogenesis-related Bet v I family protein, putative, expressed -
3 Sobic.001G400700 pathogenesis-related Bet v I family protein, putative, expressed -
4 Sobic.001G400800 pathogenesis-related Bet v I family protein, putative, expressed -
5 Sobic.002G333900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CSLF4 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
6 Sobic.003G152100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed -
7 Sobic.009G072900 calmodulin-binding protein, putative, expressed -
8 Sobic.006G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.001G192200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
10 Sobic.003G251600 S-locus-like receptor protein kinase, putative, expressed -
11 Sobic.001G050100 Cupin domain containing protein, expressed -
12 Sobic.007G151300 Cupin domain containing protein, expressed -
13 Sobic.004G264000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
14 Sobic.001G481400 similar to AP2 domain containing protein(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@similar to AP2 domain containing protein(PubMedID : 24655390)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
15 Sobic.005G206601 - -
16 Sobic.009G240600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase, putative, expressed -
17 Sobic.006G157900 C2 domain containing protein, putative, expressed -
18 Sobic.002G329000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-ld.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
19 Sobic.003G366600 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
20 Sobic.001G401200 pathogenesis-related Bet v I family protein, putative, expressed -


Gene co-expression network
sample Sobic001G247900 Sobic001G247900 Sobic008G191600 Sobic008G191600 Sobic001G247900--Sobic008G191600 Sobic001G401300 Sobic001G401300 Sobic001G247900--Sobic001G401300 Sobic001G400700 Sobic001G400700 Sobic001G247900--Sobic001G400700 Sobic001G400800 Sobic001G400800 Sobic001G247900--Sobic001G400800 Sobic002G333900 Sobic002G333900 Sobic001G247900--Sobic002G333900 Sobic003G152100 Sobic003G152100 Sobic001G247900--Sobic003G152100 Sobic009G072900 Sobic009G072900 Sobic001G247900--Sobic009G072900 Sobic006G243600 Sobic006G243600 Sobic001G247900--Sobic006G243600 Sobic001G192200 Sobic001G192200 Sobic001G247900--Sobic001G192200 Sobic001G050100 Sobic001G050100 Sobic008G191600--Sobic001G050100 Sobic003G192100 Sobic003G192100 Sobic008G191600--Sobic003G192100 Sobic008G032100 Sobic008G032100 Sobic008G191600--Sobic008G032100 Sobic002G312900 Sobic002G312900 Sobic008G191600--Sobic002G312900 Sobic008G191600--Sobic001G400700 Sobic008G191600--Sobic001G247900 Sobic007G151300 Sobic007G151300 Sobic008G191600--Sobic007G151300 Sobic004G101300 Sobic004G101300 Sobic008G191600--Sobic004G101300 Sobic010G270500 Sobic010G270500 Sobic008G191600--Sobic010G270500 Sobic001G401200 Sobic001G401200 Sobic001G401300--Sobic001G401200 Sobic001G401300--Sobic001G400700 Sobic008G034500 Sobic008G034500 Sobic001G401300--Sobic008G034500 Sobic003G215800 Sobic003G215800 Sobic001G401300--Sobic003G215800 Sobic001G401300--Sobic002G333900 Sobic001G401300--Sobic008G191600 Sobic001G401300--Sobic001G247900 Sobic006G039700 Sobic006G039700 Sobic001G401300--Sobic006G039700 Sobic009G043600 Sobic009G043600 Sobic001G401300--Sobic009G043600 Sobic001G400700--Sobic001G400800 Sobic005G101800 Sobic005G101800 Sobic001G400700--Sobic005G101800 Sobic004G245800 Sobic004G245800 Sobic001G400700--Sobic004G245800 Sobic003G286600 Sobic003G286600 Sobic001G400700--Sobic003G286600 Sobic001G177800 Sobic001G177800 Sobic001G400700--Sobic001G177800 Sobic010G176600 Sobic010G176600 Sobic001G400700--Sobic010G176600 Sobic003G252800 Sobic003G252800 Sobic001G400700--Sobic003G252800 Sobic002G183200 Sobic002G183200 Sobic001G400700--Sobic002G183200 Sobic006G099900 Sobic006G099900 Sobic001G400700--Sobic006G099900 Sobic007G227300 Sobic007G227300 Sobic001G400800--Sobic007G227300 Sobic001G400800--Sobic001G400700 Sobic001G400800--Sobic004G245800 Sobic001G400800--Sobic005G101800 Sobic001G400800--Sobic003G252800 Sobic001G400800--Sobic001G177800 Sobic001G400800--Sobic006G099900 Sobic010G084400 Sobic010G084400 Sobic001G400800--Sobic010G084400 Sobic001G187200 Sobic001G187200 Sobic001G400800--Sobic001G187200 Sobic002G333900--Sobic001G401300 Sobic002G333900--Sobic008G034500 Sobic002G333900--Sobic001G247900 Sobic006G196200 Sobic006G196200 Sobic002G333900--Sobic006G196200 Sobic002G333900--Sobic003G152100 Sobic001G466000 Sobic001G466000 Sobic002G333900--Sobic001G466000 Sobic002G333900--Sobic001G400700 Sobic002G328300 Sobic002G328300 Sobic002G333900--Sobic002G328300 Sobic002G333900--Sobic001G401200 Sobic010G084100 Sobic010G084100 Sobic003G152100--Sobic010G084100 Sobic005G206601 Sobic005G206601 Sobic003G152100--Sobic005G206601 Sobic004G071650 Sobic004G071650 Sobic003G152100--Sobic004G071650 Sobic003G117600 Sobic003G117600 Sobic003G152100--Sobic003G117600 Sobic003G152100--Sobic002G183200 Sobic003G152100--Sobic001G400800 Sobic008G063400 Sobic008G063400 Sobic003G152100--Sobic008G063400 Sobic010G084700 Sobic010G084700 Sobic003G152100--Sobic010G084700 Sobic005G045900 Sobic005G045900 Sobic003G152100--Sobic005G045900 Sobic001G403000 Sobic001G403000 Sobic009G072900--Sobic001G403000 Sobic002G375400 Sobic002G375400 Sobic009G072900--Sobic002G375400 Sobic010G185000 Sobic010G185000 Sobic009G072900--Sobic010G185000 Sobic009G072900--Sobic005G206601 Sobic004G348400 Sobic004G348400 Sobic009G072900--Sobic004G348400 Sobic009G072900--Sobic006G243600 Sobic003G366600 Sobic003G366600 Sobic009G072900--Sobic003G366600 Sobic009G240600 Sobic009G240600 Sobic009G072900--Sobic009G240600 Sobic003G430600 Sobic003G430600 Sobic009G072900--Sobic003G430600 Sobic003G368600 Sobic003G368600 Sobic006G243600--Sobic003G368600 Sobic006G243600--Sobic004G348400 Sobic006G243600--Sobic009G240600 Sobic006G243600--Sobic007G151300 Sobic002G247600 Sobic002G247600 Sobic006G243600--Sobic002G247600 Sobic006G243600--Sobic009G072900 Sobic001G147900 Sobic001G147900 Sobic006G243600--Sobic001G147900 Sobic006G243600--Sobic010G185000 Sobic010G008400 Sobic010G008400 Sobic006G243600--Sobic010G008400 Sobic004G243100 Sobic004G243100 Sobic001G192200--Sobic004G243100 Sobic002G251000 Sobic002G251000 Sobic001G192200--Sobic002G251000 Sobic001G423800 Sobic001G423800 Sobic001G192200--Sobic001G423800 Sobic002G139400 Sobic002G139400 Sobic001G192200--Sobic002G139400 Sobic001G192200--Sobic007G227300 Sobic009G224100 Sobic009G224100 Sobic001G192200--Sobic009G224100 Sobic001G192200--Sobic010G084700 Sobic001G192200--Sobic010G084100 Sobic003G200700 Sobic003G200700 Sobic001G192200--Sobic003G200700
Octagon: transcription factors


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