Gene annotation
Transcriptome id Sobic.002G333900.1
Synonym CSLD5, Sb02g035980, SOS6, ATCSLD5
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
CSLF4 - cellulose synthase-like family F
beta1,3
1,4 glucan synthase, expressed
UniProt A0A1W0W6N3
Pfam PF03552
Panther DB PTHR13301 PTHR13301:SF38
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016760; cellulose synthase (UDP-forming) activity GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT3G03050 : cellulose synthase-like D3
RAP-DB (Rice) LOC_Os07g36690.1 : CSLF2 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed
MaizeGDB (Corn) Zm00025a055112 , Zm00025a048344 , Zm00025a048342 , Zm00025a006226 , Zm00025a030058 , Zm00025a006857
Brachypodium PNT68814 , KQJ99839 , KQJ99838 , PNT68811 , KQJ99837 , KQJ95295 , KQK15829 , PNT68813 , KQJ99840 , PNT68812
Barley HORVU1Hr1G039250.10 , HORVU1Hr1G039250.11 , HORVU1Hr1G039250.12 , HORVU1Hr1G039250.13 , HORVU1Hr1G039250.14 , HORVU1Hr1G039250.15 , HORVU1Hr1G039250.16 , HORVU1Hr1G039250.17 , HORVU1Hr1G039250.18 , HORVU1Hr1G039250.19 , HORVU1Hr1G039250.2 , HORVU1Hr1G039250.3 , HORVU1Hr1G039250.6 , HORVU1Hr1G039250.4 , HORVU1Hr1G039250.5 , HORVU1Hr1G039250.8 , HORVU1Hr1G039250.9 , HORVU2Hr1G042310.4 , HORVU2Hr1G042310.2 , HORVU2Hr1G042310.3 , HORVU2Hr1G042310.1 , HORVU2Hr1G021450.2 , HORVU2Hr1G021450.3 , HORVU2Hr1G021450.6 , HORVU2Hr1G021450.4 , HORVU2Hr1G021450.5 , HORVU1Hr1G039250.25 , HORVU1Hr1G039250.24 , HORVU1Hr1G039250.27 , HORVU1Hr1G039250.26 , HORVU1Hr1G039250.21 , HORVU1Hr1G039250.20 , HORVU1Hr1G039250.23 , HORVU1Hr1G039250.22 , HORVU1Hr1G039250.29 , HORVU1Hr1G039250.28 , HORVU2Hr1G042300.5 , HORVU2Hr1G042300.4 , HORVU2Hr1G042300.7 , HORVU2Hr1G042300.6 , HORVU2Hr1G042300.1 , HORVU2Hr1G042300.3 , HORVU2Hr1G042300.2 , HORVU7Hr1G121040.6 , HORVU7Hr1G121040.5 , HORVU7Hr1G121040.4 , HORVU7Hr1G121040.3 , HORVU7Hr1G121040.2 , HORVU7Hr1G121040.1 , HORVU5Hr1G023640.2 , HORVU5Hr1G023640.6 , HORVU5Hr1G023640.3 , HORVU5Hr1G023640.8 , HORVU5Hr1G023640.9 , HORVU1Hr1G022900.2 , HORVU1Hr1G022900.3 , HORVU1Hr1G022900.1 , HORVU1Hr1G022900.6 , HORVU1Hr1G022900.7 , HORVU1Hr1G022900.4 , HORVU1Hr1G022900.5 , HORVU1Hr1G022900.8 , HORVU1Hr1G022900.9 , HORVU1Hr1G039250.30 , HORVU5Hr1G113750.2 , HORVU5Hr1G113750.3 , HORVU5Hr1G023640.7 , HORVU5Hr1G023640.4 , HORVU5Hr1G023640.5 , HORVU2Hr1G042240.4 , HORVU2Hr1G042240.5 , HORVU2Hr1G042240.1 , HORVU2Hr1G042240.2 , HORVU2Hr1G042240.3 , HORVU5Hr1G023640.1 , HORVU1Hr1G022900.10 , HORVU1Hr1G022900.11
Wheat TraesCS7D02G555000 , TraesCS2D02G126100 , TraesCS2D02G217000 , TraesCS2D02G575900 , TraesCS2D02G216800 , TraesCS2A02G210000 , TraesCS7D02G339800 , TraesCSU02G003300 , TraesCS2B02G236200 , TraesCS2B02G236200 , TraesCS2B02G236500 , TraesCS2A02G210300 , TraesCS7A02G555600 , TraesCS2B02G236400 , TraesCS5B02G495200 , TraesCS2A02G210400 , TraesCS1A02G099100 , TraesCS7B02G480200 , TraesCS5A02G482200 , TraesCS7A02G331500 , TraesCS1B02G167200 , TraesCS2B02G626300 , TraesCS5A02G090500 , TraesCS2A02G122600 , TraesCS2A02G565500 , TraesCS5D02G495800 , TraesCS1D02G107100 , TraesCS1D02G146600 , TraesCS2B02G626500 , TraesCS1D02G146600 , TraesCS5B02G096200 , TraesCS7D02G294300 , TraesCS2B02G144900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G401300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PR10(PubMedID : 20078779)@accumulation during fungal development(PubMedID : 10356799)@pathogenesis-related Bet v I family protein, putative, expressed -
2 Sobic.008G034500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phytosulfokines precursor, putative, expressed -
3 Sobic.001G247900 "Protein chitinase 2, putative, (Os)"(PubMedID : 27208977)@chitinase 2, putative, expressed -
4 Sobic.006G196200 expressed protein -
5 Sobic.003G152100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed -
6 Sobic.001G466000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
7 Sobic.001G400700 pathogenesis-related Bet v I family protein, putative, expressed -
8 Sobic.002G328300 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
9 Sobic.001G401200 pathogenesis-related Bet v I family protein, putative, expressed -
10 Sobic.003G349600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZOS1-14 - C2H2 zinc finger protein, expressed -
11 Sobic.009G082700 serine/threonine-protein kinase receptor precursor, putative, expressed -
12 Sobic.004G167800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@pectinesterase inhibitor domain containing protein, putative, expressed -
13 Sobic.002G249000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
14 Sobic.008G191600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@vesicle-associated membrane protein, putative, expressed -
15 Sobic.010G084100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
16 Sobic.010G176700 receptor-like protein kinase precursor, putative, expressed -
17 Sobic.004G071650 - -
18 Sobic.001G190200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
19 Sobic.010G176600 - -
20 Sobic.004G277000 purine permease, putative, expressed -


Gene co-expression network
sample Sobic002G333900 Sobic002G333900 Sobic001G401300 Sobic001G401300 Sobic002G333900--Sobic001G401300 Sobic008G034500 Sobic008G034500 Sobic002G333900--Sobic008G034500 Sobic001G247900 Sobic001G247900 Sobic002G333900--Sobic001G247900 Sobic006G196200 Sobic006G196200 Sobic002G333900--Sobic006G196200 Sobic003G152100 Sobic003G152100 Sobic002G333900--Sobic003G152100 Sobic001G466000 Sobic001G466000 Sobic002G333900--Sobic001G466000 Sobic001G400700 Sobic001G400700 Sobic002G333900--Sobic001G400700 Sobic002G328300 Sobic002G328300 Sobic002G333900--Sobic002G328300 Sobic001G401200 Sobic001G401200 Sobic002G333900--Sobic001G401200 Sobic001G401300--Sobic001G401200 Sobic001G401300--Sobic001G400700 Sobic001G401300--Sobic008G034500 Sobic003G215800 Sobic003G215800 Sobic001G401300--Sobic003G215800 Sobic001G401300--Sobic002G333900 Sobic008G191600 Sobic008G191600 Sobic001G401300--Sobic008G191600 Sobic001G401300--Sobic001G247900 Sobic006G039700 Sobic006G039700 Sobic001G401300--Sobic006G039700 Sobic009G043600 Sobic009G043600 Sobic001G401300--Sobic009G043600 Sobic008G034500--Sobic001G401300 Sobic008G034500--Sobic003G152100 Sobic002G367400 Sobic002G367400 Sobic008G034500--Sobic002G367400 Sobic008G034500--Sobic002G333900 Sobic008G034500--Sobic001G400700 Sobic008G034500--Sobic001G466000 Sobic008G034500--Sobic002G328300 Sobic003G349600 Sobic003G349600 Sobic008G034500--Sobic003G349600 Sobic009G143400 Sobic009G143400 Sobic008G034500--Sobic009G143400 Sobic001G247900--Sobic008G191600 Sobic001G247900--Sobic001G401300 Sobic001G247900--Sobic001G400700 Sobic001G400800 Sobic001G400800 Sobic001G247900--Sobic001G400800 Sobic001G247900--Sobic002G333900 Sobic001G247900--Sobic003G152100 Sobic009G072900 Sobic009G072900 Sobic001G247900--Sobic009G072900 Sobic006G243600 Sobic006G243600 Sobic001G247900--Sobic006G243600 Sobic001G192200 Sobic001G192200 Sobic001G247900--Sobic001G192200 Sobic006G196200--Sobic002G333900 Sobic006G196200--Sobic008G034500 Sobic006G196200--Sobic001G401300 Sobic002G249000 Sobic002G249000 Sobic006G196200--Sobic002G249000 Sobic006G196200--Sobic002G328300 Sobic004G276100 Sobic004G276100 Sobic006G196200--Sobic004G276100 Sobic010G176700 Sobic010G176700 Sobic006G196200--Sobic010G176700 Sobic006G196200--Sobic003G215800 Sobic007G009100 Sobic007G009100 Sobic006G196200--Sobic007G009100 Sobic010G084100 Sobic010G084100 Sobic003G152100--Sobic010G084100 Sobic005G206601 Sobic005G206601 Sobic003G152100--Sobic005G206601 Sobic004G071650 Sobic004G071650 Sobic003G152100--Sobic004G071650 Sobic003G117600 Sobic003G117600 Sobic003G152100--Sobic003G117600 Sobic002G183200 Sobic002G183200 Sobic003G152100--Sobic002G183200 Sobic003G152100--Sobic001G400800 Sobic008G063400 Sobic008G063400 Sobic003G152100--Sobic008G063400 Sobic010G084700 Sobic010G084700 Sobic003G152100--Sobic010G084700 Sobic005G045900 Sobic005G045900 Sobic003G152100--Sobic005G045900 Sobic001G466000--Sobic002G367400 Sobic001G466000--Sobic003G349600 Sobic009G254900 Sobic009G254900 Sobic001G466000--Sobic009G254900 Sobic001G466000--Sobic009G143400 Sobic005G063100 Sobic005G063100 Sobic001G466000--Sobic005G063100 Sobic009G234100 Sobic009G234100 Sobic001G466000--Sobic009G234100 Sobic002G336600 Sobic002G336600 Sobic001G466000--Sobic002G336600 Sobic008G136400 Sobic008G136400 Sobic001G466000--Sobic008G136400 Sobic003G116800 Sobic003G116800 Sobic001G466000--Sobic003G116800 Sobic001G400700--Sobic001G400800 Sobic005G101800 Sobic005G101800 Sobic001G400700--Sobic005G101800 Sobic004G245800 Sobic004G245800 Sobic001G400700--Sobic004G245800 Sobic003G286600 Sobic003G286600 Sobic001G400700--Sobic003G286600 Sobic001G177800 Sobic001G177800 Sobic001G400700--Sobic001G177800 Sobic010G176600 Sobic010G176600 Sobic001G400700--Sobic010G176600 Sobic003G252800 Sobic003G252800 Sobic001G400700--Sobic003G252800 Sobic001G400700--Sobic002G183200 Sobic006G099900 Sobic006G099900 Sobic001G400700--Sobic006G099900 Sobic003G285500 Sobic003G285500 Sobic002G328300--Sobic003G285500 Sobic002G328300--Sobic009G143400 Sobic003G265200 Sobic003G265200 Sobic002G328300--Sobic003G265200 Sobic006G106800 Sobic006G106800 Sobic002G328300--Sobic006G106800 Sobic002G328300--Sobic009G254900 Sobic005G229700 Sobic005G229700 Sobic002G328300--Sobic005G229700 Sobic002G328300--Sobic002G367400 Sobic002G328300--Sobic008G034500 Sobic009G221400 Sobic009G221400 Sobic002G328300--Sobic009G221400 Sobic001G401200--Sobic001G400700 Sobic001G401200--Sobic001G401300 Sobic001G401200--Sobic001G400800 Sobic001G401200--Sobic004G245800 Sobic001G401200--Sobic009G043600 Sobic001G401200--Sobic006G106800 Sobic002G353900 Sobic002G353900 Sobic001G401200--Sobic002G353900 Sobic001G401100 Sobic001G401100 Sobic001G401200--Sobic001G401100 Sobic001G401200--Sobic002G367400
Octagon: transcription factors


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