Gene annotation
Transcriptome id Sobic.010G176700.1,Sobic.010G176700.2
Synonym Sb10g022860
Functional annotation receptor-like protein kinase precursor, putative, expressed
UniProt A0A194YJV9 , A0A1W0VTP5
Pfam PF08263 PF00069 PF13855 PF13855 PF00069
Panther DB PTHR27000 PTHR27000:SF139
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity GO:0005515protein binding GO:0005515protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G47570 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os06g38670.1 : receptor-like protein kinase precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS4B02G350900 , TraesCS7A02G366800 , TraesCS7D02G356000 , TraesCS7D02G355400 , TraesCS4D02G345600 , TraesCS4D02G345700 , TraesCS7D02G355600 , TraesCS5A02G519400 , TraesCS7B02G261000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G061400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@basic helix-loop-helix, putative, expressed -
2 Sobic.002G249000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
3 Sobic.009G003900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
4 Sobic.001G184000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
5 Sobic.002G057300 expressed protein -
6 Sobic.003G442500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CESA2 - cellulose synthase, expressed -
7 Sobic.004G185900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@galactosyltransferase, putative, expressed -
8 Sobic.001G010400 snRK1-interacting protein 1, putative, expressed -
9 Sobic.004G277000 purine permease, putative, expressed -
10 Sobic.003G075500 mitochondrial carrier protein, putative, expressed -
11 Sobic.002G333900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CSLF4 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
12 Sobic.009G038401 - -
13 Sobic.006G054900 DUF538 domain containing protein, putative, expressed -
14 Sobic.010G210200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
15 Sobic.010G117200 DUF538 domain containing protein, putative, expressed -
16 Sobic.002G381300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
17 Sobic.001G401300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PR10(PubMedID : 20078779)@accumulation during fungal development(PubMedID : 10356799)@pathogenesis-related Bet v I family protein, putative, expressed -
18 Sobic.006G196200 expressed protein -
19 Sobic.009G016800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
20 Sobic.003G280900 NADP-malic enzyme(PubMedID : 26904072)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)


Gene co-expression network
sample Sobic010G176700 Sobic010G176700 Sobic003G061400 Sobic003G061400 Sobic010G176700--Sobic003G061400 Sobic002G249000 Sobic002G249000 Sobic010G176700--Sobic002G249000 Sobic009G003900 Sobic009G003900 Sobic010G176700--Sobic009G003900 Sobic001G184000 Sobic001G184000 Sobic010G176700--Sobic001G184000 Sobic002G057300 Sobic002G057300 Sobic010G176700--Sobic002G057300 Sobic003G442500 Sobic003G442500 Sobic010G176700--Sobic003G442500 Sobic004G185900 Sobic004G185900 Sobic010G176700--Sobic004G185900 Sobic001G010400 Sobic001G010400 Sobic010G176700--Sobic001G010400 Sobic004G277000 Sobic004G277000 Sobic010G176700--Sobic004G277000 Sobic004G333200 Sobic004G333200 Sobic003G061400--Sobic004G333200 Sobic003G061400--Sobic010G176700 Sobic003G061400--Sobic003G442500 Sobic001G132000 Sobic001G132000 Sobic003G061400--Sobic001G132000 Sobic005G215900 Sobic005G215900 Sobic003G061400--Sobic005G215900 Sobic010G210200 Sobic010G210200 Sobic003G061400--Sobic010G210200 Sobic005G024900 Sobic005G024900 Sobic003G061400--Sobic005G024900 Sobic009G016800 Sobic009G016800 Sobic003G061400--Sobic009G016800 Sobic006G127100 Sobic006G127100 Sobic003G061400--Sobic006G127100 Sobic002G249000--Sobic004G277000 Sobic002G249000--Sobic001G010400 Sobic004G050000 Sobic004G050000 Sobic002G249000--Sobic004G050000 Sobic002G249000--Sobic009G003900 Sobic010G224200 Sobic010G224200 Sobic002G249000--Sobic010G224200 Sobic005G117400 Sobic005G117400 Sobic002G249000--Sobic005G117400 Sobic002G249000--Sobic010G176700 Sobic002G180600 Sobic002G180600 Sobic002G249000--Sobic002G180600 Sobic004G307000 Sobic004G307000 Sobic002G249000--Sobic004G307000 Sobic009G003900--Sobic004G277000 Sobic009G003900--Sobic002G249000 Sobic009G003900--Sobic004G050000 Sobic009G003900--Sobic005G117400 Sobic002G264400 Sobic002G264400 Sobic009G003900--Sobic002G264400 Sobic009G003900--Sobic001G184000 Sobic002G090200 Sobic002G090200 Sobic009G003900--Sobic002G090200 Sobic009G003900--Sobic002G180600 Sobic010G072000 Sobic010G072000 Sobic009G003900--Sobic010G072000 Sobic001G184000--Sobic009G003900 Sobic003G075500 Sobic003G075500 Sobic001G184000--Sobic003G075500 Sobic001G184000--Sobic010G176700 Sobic001G184000--Sobic004G277000 Sobic001G184000--Sobic002G249000 Sobic001G184000--Sobic001G010400 Sobic001G184000--Sobic010G224200 Sobic001G184000--Sobic005G117400 Sobic006G264300 Sobic006G264300 Sobic001G184000--Sobic006G264300 Sobic004G308000 Sobic004G308000 Sobic002G057300--Sobic004G308000 Sobic002G057300--Sobic002G090200 Sobic003G085300 Sobic003G085300 Sobic002G057300--Sobic003G085300 Sobic002G057300--Sobic010G176700 Sobic002G057300--Sobic009G003900 Sobic002G057300--Sobic010G072000 Sobic002G057300--Sobic002G249000 Sobic001G009900 Sobic001G009900 Sobic002G057300--Sobic001G009900 Sobic001G100700 Sobic001G100700 Sobic002G057300--Sobic001G100700 Sobic003G442500--Sobic003G061400 Sobic003G442500--Sobic010G210200 Sobic003G442500--Sobic010G176700 Sobic003G442500--Sobic004G333200 Sobic002G113100 Sobic002G113100 Sobic003G442500--Sobic002G113100 Sobic003G061800 Sobic003G061800 Sobic003G442500--Sobic003G061800 Sobic001G409200 Sobic001G409200 Sobic003G442500--Sobic001G409200 Sobic003G111300 Sobic003G111300 Sobic003G442500--Sobic003G111300 Sobic003G442500--Sobic001G010400 Sobic004G185900--Sobic001G010400 Sobic007G148800 Sobic007G148800 Sobic004G185900--Sobic007G148800 Sobic006G140000 Sobic006G140000 Sobic004G185900--Sobic006G140000 Sobic004G054300 Sobic004G054300 Sobic004G185900--Sobic004G054300 Sobic010G016400 Sobic010G016400 Sobic004G185900--Sobic010G016400 Sobic004G185900--Sobic002G249000 Sobic002G113800 Sobic002G113800 Sobic004G185900--Sobic002G113800 Sobic005G139400 Sobic005G139400 Sobic004G185900--Sobic005G139400 Sobic004G185900--Sobic010G176700 Sobic001G010400--Sobic002G249000 Sobic001G010400--Sobic007G148800 Sobic001G010400--Sobic004G185900 Sobic001G010400--Sobic002G113800 Sobic001G393800 Sobic001G393800 Sobic001G010400--Sobic001G393800 Sobic002G258100 Sobic002G258100 Sobic001G010400--Sobic002G258100 Sobic001G010400--Sobic002G180600 Sobic008G107500 Sobic008G107500 Sobic001G010400--Sobic008G107500 Sobic001G010400--Sobic010G016400 Sobic004G277000--Sobic004G050000 Sobic009G043600 Sobic009G043600 Sobic004G277000--Sobic009G043600 Sobic004G277000--Sobic002G249000 Sobic004G277000--Sobic009G003900 Sobic002G267500 Sobic002G267500 Sobic004G277000--Sobic002G267500 Sobic006G173900 Sobic006G173900 Sobic004G277000--Sobic006G173900 Sobic004G276100 Sobic004G276100 Sobic004G277000--Sobic004G276100 Sobic009G177800 Sobic009G177800 Sobic004G277000--Sobic009G177800 Sobic004G277000--Sobic002G264400
Octagon: transcription factors


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