Gene annotation
Transcriptome id Sobic.003G442500.1
Synonym Sb03g047220, ATCSLG3, CSLG3
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
CESA2 - cellulose synthase, expressed
UniProt C5XJC9
Pfam PF03552
Panther DB PTHR13301 PTHR13301:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016760; cellulose synthase (UDP-forming) activity GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT4G23990 : cellulose synthase like G3
RAP-DB (Rice) LOC_Os03g59340.1 : CESA2 - cellulose synthase, expressed
MaizeGDB (Corn) Zm00025a025841
Brachypodium -
Barley HORVU3Hr1G016990.12 , HORVU3Hr1G016990.10 , HORVU3Hr1G016990.11 , HORVU3Hr1G016990.4 , HORVU3Hr1G016990.5 , HORVU3Hr1G016990.6 , HORVU3Hr1G016990.7 , HORVU3Hr1G016990.1 , HORVU3Hr1G016990.2 , HORVU3Hr1G016990.3 , HORVU3Hr1G016990.8 , HORVU3Hr1G016990.9
Wheat TraesCS3A02G094600 , TraesCS3A02G094600 , TraesCS3D02G094800 , TraesCS3B02G110100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G061400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@basic helix-loop-helix, putative, expressed -
2 Sobic.010G210200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
3 Sobic.010G176700 receptor-like protein kinase precursor, putative, expressed -
4 Sobic.004G333200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.002G113100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@membrane associated DUF588 domain containing protein, putative, expressed -
6 Sobic.003G061800 glutaryl-CoA dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
7 Sobic.001G409200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
8 Sobic.003G111300 PIII1 - Proteinase inhibitor II family protein precursor, expressed -
9 Sobic.001G010400 snRK1-interacting protein 1, putative, expressed -
10 Sobic.001G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@electron transfer flavoprotein subunit alpha, mitochondrial precursor, putative, expressed K03522: fixB, electron transfer flavoprotein alpha subunit
11 Sobic.006G132500 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
12 Sobic.001G132000 fumarylacetoacetase, putative, expressed K01557: acylpyruvate hydrolase
13 Sobic.005G215900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
14 Sobic.010G264700 - -
15 Sobic.004G225100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K01501: nitrilase
16 Sobic.005G024900 major facilitator superfamily antiporter, putative, expressed -
17 Sobic.003G241000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CTP synthase, putative, expressed K01937: pyrG, CTP synthase
18 Sobic.006G127100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@malate synthase, glyoxysomal, putative, expressed K01638: aceB, malate synthase
19 Sobic.006G140200 sialyltransferase family domain containing protein, expressed -
20 Sobic.002G249000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -


Gene co-expression network
sample Sobic003G442500 Sobic003G442500 Sobic003G061400 Sobic003G061400 Sobic003G442500--Sobic003G061400 Sobic010G210200 Sobic010G210200 Sobic003G442500--Sobic010G210200 Sobic010G176700 Sobic010G176700 Sobic003G442500--Sobic010G176700 Sobic004G333200 Sobic004G333200 Sobic003G442500--Sobic004G333200 Sobic002G113100 Sobic002G113100 Sobic003G442500--Sobic002G113100 Sobic003G061800 Sobic003G061800 Sobic003G442500--Sobic003G061800 Sobic001G409200 Sobic001G409200 Sobic003G442500--Sobic001G409200 Sobic003G111300 Sobic003G111300 Sobic003G442500--Sobic003G111300 Sobic001G010400 Sobic001G010400 Sobic003G442500--Sobic001G010400 Sobic003G061400--Sobic004G333200 Sobic003G061400--Sobic010G176700 Sobic003G061400--Sobic003G442500 Sobic001G132000 Sobic001G132000 Sobic003G061400--Sobic001G132000 Sobic005G215900 Sobic005G215900 Sobic003G061400--Sobic005G215900 Sobic003G061400--Sobic010G210200 Sobic005G024900 Sobic005G024900 Sobic003G061400--Sobic005G024900 Sobic009G016800 Sobic009G016800 Sobic003G061400--Sobic009G016800 Sobic006G127100 Sobic006G127100 Sobic003G061400--Sobic006G127100 Sobic006G132500 Sobic006G132500 Sobic010G210200--Sobic006G132500 Sobic010G210200--Sobic001G132000 Sobic010G210200--Sobic005G215900 Sobic009G167700 Sobic009G167700 Sobic010G210200--Sobic009G167700 Sobic010G210200--Sobic003G061800 Sobic010G210200--Sobic003G442500 Sobic005G217200 Sobic005G217200 Sobic010G210200--Sobic005G217200 Sobic009G210600 Sobic009G210600 Sobic010G210200--Sobic009G210600 Sobic010G210200--Sobic003G061400 Sobic010G176700--Sobic003G061400 Sobic002G249000 Sobic002G249000 Sobic010G176700--Sobic002G249000 Sobic009G003900 Sobic009G003900 Sobic010G176700--Sobic009G003900 Sobic001G184000 Sobic001G184000 Sobic010G176700--Sobic001G184000 Sobic002G057300 Sobic002G057300 Sobic010G176700--Sobic002G057300 Sobic010G176700--Sobic003G442500 Sobic004G185900 Sobic004G185900 Sobic010G176700--Sobic004G185900 Sobic010G176700--Sobic001G010400 Sobic004G277000 Sobic004G277000 Sobic010G176700--Sobic004G277000 Sobic004G333200--Sobic003G061400 Sobic005G178100 Sobic005G178100 Sobic004G333200--Sobic005G178100 Sobic001G305800 Sobic001G305800 Sobic004G333200--Sobic001G305800 Sobic007G219900 Sobic007G219900 Sobic004G333200--Sobic007G219900 Sobic004G333200--Sobic006G127100 Sobic004G345800 Sobic004G345800 Sobic004G333200--Sobic004G345800 Sobic004G321800 Sobic004G321800 Sobic004G333200--Sobic004G321800 Sobic004G101900 Sobic004G101900 Sobic004G333200--Sobic004G101900 Sobic003G184900 Sobic003G184900 Sobic004G333200--Sobic003G184900 Sobic002G113100--Sobic003G442500 Sobic005G086100 Sobic005G086100 Sobic002G113100--Sobic005G086100 Sobic002G113100--Sobic003G061800 Sobic010G239700 Sobic010G239700 Sobic002G113100--Sobic010G239700 Sobic002G113100--Sobic009G210600 Sobic002G087800 Sobic002G087800 Sobic002G113100--Sobic002G087800 Sobic004G006200 Sobic004G006200 Sobic002G113100--Sobic004G006200 Sobic006G049300 Sobic006G049300 Sobic002G113100--Sobic006G049300 Sobic004G225100 Sobic004G225100 Sobic002G113100--Sobic004G225100 Sobic009G057300 Sobic009G057300 Sobic003G061800--Sobic009G057300 Sobic003G061800--Sobic004G345800 Sobic003G354400 Sobic003G354400 Sobic003G061800--Sobic003G354400 Sobic001G474500 Sobic001G474500 Sobic003G061800--Sobic001G474500 Sobic009G126900 Sobic009G126900 Sobic003G061800--Sobic009G126900 Sobic003G388251 Sobic003G388251 Sobic003G061800--Sobic003G388251 Sobic007G068100 Sobic007G068100 Sobic003G061800--Sobic007G068100 Sobic003G329400 Sobic003G329400 Sobic003G061800--Sobic003G329400 Sobic003G061800--Sobic004G101900 Sobic001G409200--Sobic004G333200 Sobic001G409200--Sobic003G442500 Sobic001G409200--Sobic010G210200 Sobic001G409200--Sobic006G132500 Sobic001G409200--Sobic003G061400 Sobic003G280900 Sobic003G280900 Sobic001G409200--Sobic003G280900 Sobic001G409200--Sobic009G210600 Sobic001G393800 Sobic001G393800 Sobic001G409200--Sobic001G393800 Sobic003G333501 Sobic003G333501 Sobic001G409200--Sobic003G333501 Sobic003G111300--Sobic006G132500 Sobic003G111200 Sobic003G111200 Sobic003G111300--Sobic003G111200 Sobic004G008800 Sobic004G008800 Sobic003G111300--Sobic004G008800 Sobic006G155000 Sobic006G155000 Sobic003G111300--Sobic006G155000 Sobic003G111300--Sobic010G210200 Sobic002G122800 Sobic002G122800 Sobic003G111300--Sobic002G122800 Sobic003G111300--Sobic003G442500 Sobic003G111300--Sobic003G061400 Sobic005G169400 Sobic005G169400 Sobic003G111300--Sobic005G169400 Sobic001G010400--Sobic002G249000 Sobic007G148800 Sobic007G148800 Sobic001G010400--Sobic007G148800 Sobic001G010400--Sobic004G185900 Sobic002G113800 Sobic002G113800 Sobic001G010400--Sobic002G113800 Sobic001G010400--Sobic001G393800 Sobic002G258100 Sobic002G258100 Sobic001G010400--Sobic002G258100 Sobic002G180600 Sobic002G180600 Sobic001G010400--Sobic002G180600 Sobic008G107500 Sobic008G107500 Sobic001G010400--Sobic008G107500 Sobic010G016400 Sobic010G016400 Sobic001G010400--Sobic010G016400
Octagon: transcription factors


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