Gene annotation
Transcriptome id Sobic.006G054900.1
Synonym Sb06g014330
Functional annotation DUF538 domain containing protein, putative, expressed
UniProt C5YEW0
Pfam PF04398
Panther DB PTHR31676 PTHR31676:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09310 : Protein of unknown function, DUF538
RAP-DB (Rice) LOC_Os07g02850.1 : DUF538 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a009479 , Zm00025a044909 , Zm00025a009480
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G100700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII5 - Proteinase inhibitor II family protein precursor, expressed -
2 Sobic.004G181800 - -
3 Sobic.010G176700 receptor-like protein kinase precursor, putative, expressed -
4 Sobic.010G117200 DUF538 domain containing protein, putative, expressed -
5 Sobic.003G278000 expressed protein -
6 Sobic.001G196300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
7 Sobic.001G184000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
8 Sobic.005G213200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein kinase family protein, putative, expressed -
9 Sobic.003G075500 mitochondrial carrier protein, putative, expressed -
10 Sobic.001G401300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PR10(PubMedID : 20078779)@accumulation during fungal development(PubMedID : 10356799)@pathogenesis-related Bet v I family protein, putative, expressed -
11 Sobic.009G224800 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
12 Sobic.001G009900 pantoate--beta-alanine ligase, putative, expressed K01918: pantoate--beta-alanine ligase
13 Sobic.002G057300 expressed protein -
14 Sobic.006G199100 pathogenesis-related Bet v I family protein, putative, expressed -
15 Sobic.005G182500 jacalin-like lectin domain containing protein, expressed -
16 Sobic.002G200300 no apical meristem protein, putative, expressed -
17 Sobic.001G243500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
18 Sobic.010G138400 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
19 Sobic.006G012900 sterol 3-beta-glucosyltransferase, putative, expressed K05841: sterol 3beta-glucosyltransferase
20 Sobic.002G210901 - -


Gene co-expression network
sample Sobic006G054900 Sobic006G054900 Sobic001G100700 Sobic001G100700 Sobic006G054900--Sobic001G100700 Sobic004G181800 Sobic004G181800 Sobic006G054900--Sobic004G181800 Sobic010G176700 Sobic010G176700 Sobic006G054900--Sobic010G176700 Sobic010G117200 Sobic010G117200 Sobic006G054900--Sobic010G117200 Sobic003G278000 Sobic003G278000 Sobic006G054900--Sobic003G278000 Sobic001G196300 Sobic001G196300 Sobic006G054900--Sobic001G196300 Sobic001G184000 Sobic001G184000 Sobic006G054900--Sobic001G184000 Sobic005G213200 Sobic005G213200 Sobic006G054900--Sobic005G213200 Sobic003G075500 Sobic003G075500 Sobic006G054900--Sobic003G075500 Sobic001G100700--Sobic005G213200 Sobic001G243500 Sobic001G243500 Sobic001G100700--Sobic001G243500 Sobic001G444400 Sobic001G444400 Sobic001G100700--Sobic001G444400 Sobic001G243600 Sobic001G243600 Sobic001G100700--Sobic001G243600 Sobic009G106800 Sobic009G106800 Sobic001G100700--Sobic009G106800 Sobic009G120000 Sobic009G120000 Sobic001G100700--Sobic009G120000 Sobic004G273400 Sobic004G273400 Sobic001G100700--Sobic004G273400 Sobic010G209900 Sobic010G209900 Sobic001G100700--Sobic010G209900 Sobic003G129000 Sobic003G129000 Sobic001G100700--Sobic003G129000 Sobic004G181800--Sobic001G100700 Sobic004G181800--Sobic005G213200 Sobic004G181800--Sobic006G054900 Sobic003G049300 Sobic003G049300 Sobic004G181800--Sobic003G049300 Sobic004G181800--Sobic010G176700 Sobic006G012900 Sobic006G012900 Sobic004G181800--Sobic006G012900 Sobic002G200300 Sobic002G200300 Sobic004G181800--Sobic002G200300 Sobic004G181800--Sobic001G243500 Sobic009G158700 Sobic009G158700 Sobic004G181800--Sobic009G158700 Sobic003G061400 Sobic003G061400 Sobic010G176700--Sobic003G061400 Sobic002G249000 Sobic002G249000 Sobic010G176700--Sobic002G249000 Sobic009G003900 Sobic009G003900 Sobic010G176700--Sobic009G003900 Sobic010G176700--Sobic001G184000 Sobic002G057300 Sobic002G057300 Sobic010G176700--Sobic002G057300 Sobic003G442500 Sobic003G442500 Sobic010G176700--Sobic003G442500 Sobic004G185900 Sobic004G185900 Sobic010G176700--Sobic004G185900 Sobic001G010400 Sobic001G010400 Sobic010G176700--Sobic001G010400 Sobic004G277000 Sobic004G277000 Sobic010G176700--Sobic004G277000 Sobic010G117100 Sobic010G117100 Sobic010G117200--Sobic010G117100 Sobic010G138400 Sobic010G138400 Sobic010G117200--Sobic010G138400 Sobic010G117200--Sobic010G176700 Sobic010G117200--Sobic006G054900 Sobic002G333900 Sobic002G333900 Sobic010G117200--Sobic002G333900 Sobic009G082700 Sobic009G082700 Sobic010G117200--Sobic009G082700 Sobic009G224800 Sobic009G224800 Sobic010G117200--Sobic009G224800 Sobic006G196200 Sobic006G196200 Sobic010G117200--Sobic006G196200 Sobic002G017600 Sobic002G017600 Sobic010G117200--Sobic002G017600 Sobic003G278000--Sobic006G054900 Sobic010G117300 Sobic010G117300 Sobic003G278000--Sobic010G117300 Sobic003G278000--Sobic001G184000 Sobic005G043900 Sobic005G043900 Sobic003G278000--Sobic005G043900 Sobic003G278000--Sobic001G196300 Sobic002G329100 Sobic002G329100 Sobic003G278000--Sobic002G329100 Sobic002G089100 Sobic002G089100 Sobic003G278000--Sobic002G089100 Sobic003G278000--Sobic003G075500 Sobic005G182500 Sobic005G182500 Sobic003G278000--Sobic005G182500 Sobic003G167500 Sobic003G167500 Sobic001G196300--Sobic003G167500 Sobic002G242500 Sobic002G242500 Sobic001G196300--Sobic002G242500 Sobic001G196300--Sobic001G010400 Sobic002G153500 Sobic002G153500 Sobic001G196300--Sobic002G153500 Sobic009G111600 Sobic009G111600 Sobic001G196300--Sobic009G111600 Sobic002G196100 Sobic002G196100 Sobic001G196300--Sobic002G196100 Sobic001G196300--Sobic002G249000 Sobic004G284500 Sobic004G284500 Sobic001G196300--Sobic004G284500 Sobic009G241700 Sobic009G241700 Sobic001G196300--Sobic009G241700 Sobic001G184000--Sobic009G003900 Sobic001G184000--Sobic003G075500 Sobic001G184000--Sobic010G176700 Sobic001G184000--Sobic004G277000 Sobic001G184000--Sobic002G249000 Sobic001G184000--Sobic001G010400 Sobic010G224200 Sobic010G224200 Sobic001G184000--Sobic010G224200 Sobic005G117400 Sobic005G117400 Sobic001G184000--Sobic005G117400 Sobic006G264300 Sobic006G264300 Sobic001G184000--Sobic006G264300 Sobic005G213200--Sobic001G100700 Sobic005G213200--Sobic001G243600 Sobic005G213200--Sobic001G243500 Sobic005G213200--Sobic009G120000 Sobic005G213200--Sobic009G106800 Sobic005G213200--Sobic001G444400 Sobic005G213200--Sobic004G273400 Sobic010G071900 Sobic010G071900 Sobic005G213200--Sobic010G071900 Sobic005G213200--Sobic010G209900 Sobic002G264400 Sobic002G264400 Sobic003G075500--Sobic002G264400 Sobic003G075500--Sobic006G264300 Sobic003G075500--Sobic004G277000 Sobic010G072000 Sobic010G072000 Sobic003G075500--Sobic010G072000 Sobic003G075500--Sobic001G184000 Sobic003G075500--Sobic009G003900 Sobic001G329100 Sobic001G329100 Sobic003G075500--Sobic001G329100 Sobic003G075500--Sobic002G249000 Sobic002G199900 Sobic002G199900 Sobic003G075500--Sobic002G199900
Octagon: transcription factors


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