Gene annotation
Transcriptome id Sobic.001G196300.1
Synonym FAH1, CYP84A1, Sb01g017270
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cytochrome P450, putative, expressed
UniProt C5WW82
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF60
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology K09755; CYP84A, ferulate-5-hydroxylase
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT4G36220 : ferulic acid 5-hydroxylase 1
RAP-DB (Rice) LOC_Os10g36848.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a006335 , Zm00025a017435
Brachypodium KQJ97404
Barley HORVU1Hr1G047220.2 , HORVU1Hr1G047220.3 , HORVU1Hr1G047220.1 , HORVU3Hr1G014930.1 , HORVU3Hr1G014930.2 , HORVU2Hr1G109440.1 , HORVU2Hr1G109440.2 , HORVU2Hr1G109440.3 , HORVU3Hr1G014990.2 , HORVU3Hr1G014990.3 , HORVU3Hr1G014990.1
Wheat TraesCS3B02G061000 , TraesCS3A02G083600 , TraesCS1D02G176400 , TraesCS1A02G177800 , TraesCS3B02G098600 , TraesCS2B02G518400 , TraesCS2A02G490100 , TraesCS2D02G490500 , TraesCS1B02G024000 , TraesCS1D02G019400 , TraesCS1A02G019900 , TraesCS3D02G082600 , TraesCS3A02G052300 , TraesCS1D02G049700 , TraesCS1B02G202400
Populus -


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cDNA sequences
Sobic.001G196300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G167500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
2 Sobic.002G242500 Expressed in older stem(PubMedID : 28649278)@WRKY90, expressed K18835: WRKY transcription factor 2
3 Sobic.001G010400 snRK1-interacting protein 1, putative, expressed -
4 Sobic.002G153500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
5 Sobic.009G111600 expressed protein -
6 Sobic.002G196100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.002G249000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AT hook motif domain containing protein, expressed -
8 Sobic.004G284500 ORM1, putative, expressed -
9 Sobic.009G241700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
10 Sobic.007G098400 tyrosine protein kinase domain containing protein, putative, expressed -
11 Sobic.009G210300 similar to Calcium sensing protein(PubMedID : 29862293)@Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
12 Sobic.010G236500 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.006G054900 DUF538 domain containing protein, putative, expressed -
14 Sobic.004G276100 expressed protein -
15 Sobic.001G184000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
16 Sobic.004G158901 - -
17 Sobic.004G185900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@galactosyltransferase, putative, expressed -
18 Sobic.005G211400 cytochrome P450, putative, expressed -
19 Sobic.006G199100 pathogenesis-related Bet v I family protein, putative, expressed -
20 Sobic.007G078100 UPF0041 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G196300 Sobic001G196300 Sobic003G167500 Sobic003G167500 Sobic001G196300--Sobic003G167500 Sobic002G242500 Sobic002G242500 Sobic001G196300--Sobic002G242500 Sobic001G010400 Sobic001G010400 Sobic001G196300--Sobic001G010400 Sobic002G153500 Sobic002G153500 Sobic001G196300--Sobic002G153500 Sobic009G111600 Sobic009G111600 Sobic001G196300--Sobic009G111600 Sobic002G196100 Sobic002G196100 Sobic001G196300--Sobic002G196100 Sobic002G249000 Sobic002G249000 Sobic001G196300--Sobic002G249000 Sobic004G284500 Sobic004G284500 Sobic001G196300--Sobic004G284500 Sobic009G241700 Sobic009G241700 Sobic001G196300--Sobic009G241700 Sobic003G167500--Sobic002G242500 Sobic003G167500--Sobic001G196300 Sobic009G236200 Sobic009G236200 Sobic003G167500--Sobic009G236200 Sobic002G355200 Sobic002G355200 Sobic003G167500--Sobic002G355200 Sobic009G167700 Sobic009G167700 Sobic003G167500--Sobic009G167700 Sobic003G167500--Sobic001G010400 Sobic001G049200 Sobic001G049200 Sobic003G167500--Sobic001G049200 Sobic010G161450 Sobic010G161450 Sobic003G167500--Sobic010G161450 Sobic010G016400 Sobic010G016400 Sobic003G167500--Sobic010G016400 Sobic002G294200 Sobic002G294200 Sobic002G242500--Sobic002G294200 Sobic007G098400 Sobic007G098400 Sobic002G242500--Sobic007G098400 Sobic004G145200 Sobic004G145200 Sobic002G242500--Sobic004G145200 Sobic003G049300 Sobic003G049300 Sobic002G242500--Sobic003G049300 Sobic002G242500--Sobic001G049200 Sobic002G242500--Sobic003G167500 Sobic007G221100 Sobic007G221100 Sobic002G242500--Sobic007G221100 Sobic001G403700 Sobic001G403700 Sobic002G242500--Sobic001G403700 Sobic005G211400 Sobic005G211400 Sobic002G242500--Sobic005G211400 Sobic001G010400--Sobic002G249000 Sobic007G148800 Sobic007G148800 Sobic001G010400--Sobic007G148800 Sobic004G185900 Sobic004G185900 Sobic001G010400--Sobic004G185900 Sobic002G113800 Sobic002G113800 Sobic001G010400--Sobic002G113800 Sobic001G393800 Sobic001G393800 Sobic001G010400--Sobic001G393800 Sobic002G258100 Sobic002G258100 Sobic001G010400--Sobic002G258100 Sobic002G180600 Sobic002G180600 Sobic001G010400--Sobic002G180600 Sobic008G107500 Sobic008G107500 Sobic001G010400--Sobic008G107500 Sobic001G010400--Sobic010G016400 Sobic001G224400 Sobic001G224400 Sobic002G153500--Sobic001G224400 Sobic008G189300 Sobic008G189300 Sobic002G153500--Sobic008G189300 Sobic002G153500--Sobic004G284500 Sobic004G272800 Sobic004G272800 Sobic002G153500--Sobic004G272800 Sobic004G225500 Sobic004G225500 Sobic002G153500--Sobic004G225500 Sobic001G132100 Sobic001G132100 Sobic002G153500--Sobic001G132100 Sobic008G032100 Sobic008G032100 Sobic002G153500--Sobic008G032100 Sobic007G115100 Sobic007G115100 Sobic002G153500--Sobic007G115100 Sobic004G204900 Sobic004G204900 Sobic002G153500--Sobic004G204900 Sobic009G111600--Sobic004G284500 Sobic009G111600--Sobic001G403700 Sobic004G276100 Sobic004G276100 Sobic009G111600--Sobic004G276100 Sobic008G179500 Sobic008G179500 Sobic009G111600--Sobic008G179500 Sobic002G083266 Sobic002G083266 Sobic009G111600--Sobic002G083266 Sobic003G367451 Sobic003G367451 Sobic009G111600--Sobic003G367451 Sobic010G213400 Sobic010G213400 Sobic009G111600--Sobic010G213400 Sobic009G111600--Sobic004G272800 Sobic001G399100 Sobic001G399100 Sobic009G111600--Sobic001G399100 Sobic005G043000 Sobic005G043000 Sobic002G196100--Sobic005G043000 Sobic010G272300 Sobic010G272300 Sobic002G196100--Sobic010G272300 Sobic002G233100 Sobic002G233100 Sobic002G196100--Sobic002G233100 Sobic003G366600 Sobic003G366600 Sobic002G196100--Sobic003G366600 Sobic010G110800 Sobic010G110800 Sobic002G196100--Sobic010G110800 Sobic004G176600 Sobic004G176600 Sobic002G196100--Sobic004G176600 Sobic002G310600 Sobic002G310600 Sobic002G196100--Sobic002G310600 Sobic009G072900 Sobic009G072900 Sobic002G196100--Sobic009G072900 Sobic005G084600 Sobic005G084600 Sobic002G196100--Sobic005G084600 Sobic004G277000 Sobic004G277000 Sobic002G249000--Sobic004G277000 Sobic002G249000--Sobic001G010400 Sobic004G050000 Sobic004G050000 Sobic002G249000--Sobic004G050000 Sobic009G003900 Sobic009G003900 Sobic002G249000--Sobic009G003900 Sobic010G224200 Sobic010G224200 Sobic002G249000--Sobic010G224200 Sobic005G117400 Sobic005G117400 Sobic002G249000--Sobic005G117400 Sobic010G176700 Sobic010G176700 Sobic002G249000--Sobic010G176700 Sobic002G249000--Sobic002G180600 Sobic004G307000 Sobic004G307000 Sobic002G249000--Sobic004G307000 Sobic004G284500--Sobic010G213400 Sobic006G182100 Sobic006G182100 Sobic004G284500--Sobic006G182100 Sobic004G284500--Sobic009G111600 Sobic004G284500--Sobic002G153500 Sobic004G284500--Sobic004G272800 Sobic003G368500 Sobic003G368500 Sobic004G284500--Sobic003G368500 Sobic009G033700 Sobic009G033700 Sobic004G284500--Sobic009G033700 Sobic001G445800 Sobic001G445800 Sobic004G284500--Sobic001G445800 Sobic001G281400 Sobic001G281400 Sobic004G284500--Sobic001G281400 Sobic010G107100 Sobic010G107100 Sobic009G241700--Sobic010G107100 Sobic009G241700--Sobic005G211400 Sobic004G058000 Sobic004G058000 Sobic009G241700--Sobic004G058000 Sobic004G158901 Sobic004G158901 Sobic009G241700--Sobic004G158901 Sobic009G241700--Sobic007G098400 Sobic009G241700--Sobic001G403700 Sobic009G241700--Sobic001G399100 Sobic001G012800 Sobic001G012800 Sobic009G241700--Sobic001G012800 Sobic009G241700--Sobic009G111600
Octagon: transcription factors


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