Gene annotation
Transcriptome id Sobic.002G196100.1
Synonym Sb02g024260, AtMYB20, MYB20
Functional annotation MYB family transcription factor, putative, expressed
UniProt Q6URT9 , C5XC56 , Q6URV7 , Q8S3Y8 , Q8S3Y5
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF503
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G16600 : myb domain protein 43
RAP-DB (Rice) LOC_Os09g23620.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a053274 , Zm00025a032024 , Zm00025a031141 , Zm00025a005701 , Zm00025a030884 , Zm00025a005986 , Zm00025a032132 , Zm00025a047090 , Zm00025a034206 , Zm00025a046904 , Zm00025a046903 , Zm00025a032658 , Zm00025a053397 , Zm00025a047793 , Zm00025a025444 , Zm00025a021107 , Zm00025a024299 , Zm00025a042709 , Zm00025a032383 , Zm00025a017369 , Zm00025a013941 , Zm00025a048846 , Zm00025a034111 , Zm00025a036074
Brachypodium KQJ91191 , KQK15034 , KQK15035 , KQJ86312 , KQJ92025 , KQK18687 , KQJ89177 , KQK02877 , KQJ83607 , KQJ98346 , KQJ89311 , KQJ90159 , KQK19995 , KQJ90229 , PNT76695 , KQK01592 , KQK23714
Barley HORVU0Hr1G005100.1 , HORVU0Hr1G005100.2 , HORVU0Hr1G005100.3 , HORVU2Hr1G041300.4 , HORVU2Hr1G041300.2 , HORVU2Hr1G041300.3 , HORVU5Hr1G083910.2 , HORVU5Hr1G083910.3 , HORVU5Hr1G083910.4 , HORVU5Hr1G083910.5 , HORVU5Hr1G083910.6 , HORVU5Hr1G083910.7 , HORVU5Hr1G083910.9 , HORVU4Hr1G084360.3 , HORVU4Hr1G084360.2 , HORVU4Hr1G084360.1 , HORVU5Hr1G083910.12 , HORVU5Hr1G083910.10 , HORVU5Hr1G083910.11 , HORVU5Hr1G083910.14 , HORVU5Hr1G103970.5 , HORVU5Hr1G103970.4 , HORVU5Hr1G103970.6 , HORVU5Hr1G103970.1 , HORVU5Hr1G103970.3 , HORVU5Hr1G103970.2 , HORVU4Hr1G018360.2 , HORVU4Hr1G018360.6 , HORVU4Hr1G018360.7 , HORVU4Hr1G018360.5 , HORVU4Hr1G018360.8 , HORVU4Hr1G018360.9 , HORVU2Hr1G087990.2 , HORVU7Hr1G027370.1 , HORVU7Hr1G027370.2 , HORVU5Hr1G063410.2 , HORVU5Hr1G063410.1 , HORVU6Hr1G073500.5 , HORVU6Hr1G073500.4 , HORVU6Hr1G073500.3 , HORVU6Hr1G073500.1 , HORVU7Hr1G041810.9 , HORVU7Hr1G041810.8 , HORVU7Hr1G041810.1 , HORVU7Hr1G041810.3 , HORVU7Hr1G041810.2 , HORVU7Hr1G041810.5 , HORVU7Hr1G041810.4 , HORVU7Hr1G041810.7 , HORVU7Hr1G041810.6 , HORVU7Hr1G057410.9 , HORVU7Hr1G057410.2 , HORVU7Hr1G057410.3 , HORVU7Hr1G057410.1 , HORVU7Hr1G057410.6 , HORVU7Hr1G057410.7 , HORVU7Hr1G057410.4 , HORVU7Hr1G057410.5 , HORVU5Hr1G081770.2 , HORVU5Hr1G081770.3 , HORVU5Hr1G081770.1 , HORVU5Hr1G081770.6 , HORVU5Hr1G081770.7 , HORVU5Hr1G081770.4 , HORVU5Hr1G081770.5 , HORVU5Hr1G081770.8 , HORVU5Hr1G060650.10 , HORVU5Hr1G060650.11 , HORVU6Hr1G026450.3 , HORVU6Hr1G026450.2 , HORVU6Hr1G026450.1 , HORVU2Hr1G087990.1 , HORVU3Hr1G016940.1 , HORVU5Hr1G036900.3 , HORVU5Hr1G036900.1 , HORVU5Hr1G036900.6 , HORVU5Hr1G036900.5 , HORVU5Hr1G036900.4 , HORVU5Hr1G060650.1 , HORVU5Hr1G060650.2 , HORVU5Hr1G060650.3 , HORVU5Hr1G060650.4 , HORVU5Hr1G060650.5 , HORVU5Hr1G060650.6 , HORVU5Hr1G060650.7 , HORVU5Hr1G060650.8 , HORVU5Hr1G060650.9
Wheat TraesCS6D02G274900 , TraesCS5B02G330100 , TraesCS4D02G339100 , TraesCS4A02G459200 , TraesCS3D02G094500 , TraesCS2D02G209600 , TraesCS2B02G399200 , TraesCS2B02G399200 , TraesCS4B02G096500 , TraesCS5B02G203100 , TraesCS2A02G363800 , TraesCS7A02G205100 , TraesCS2A02G206400 , TraesCS3B02G109800 , TraesCS2A02G447500 , TraesCS4B02G344000 , TraesCS7B02G112400 , TraesCS7B02G112400 , TraesCS2A02G381900 , TraesCS2A02G381900 , TraesCS7A02G030600 , TraesCS6A02G294000 , TraesCS4A02G459100 , TraesCS7D02G026800 , TraesCS5D02G335700 , TraesCS5D02G225800 , TraesCS5A02G512700 , TraesCS2D02G378400 , TraesCS2D02G378400 , TraesCS5A02G111300 , TraesCS5D02G128200 , TraesCS5D02G128200 , TraesCS5A02G217900 , TraesCS5A02G205200 , TraesCS7A02G030800 , TraesCS7A02G030700 , TraesCS4A02G217800 , TraesCS5D02G326600 , TraesCS5D02G210900 , TraesCS4D02G092900 , TraesCS5B02G119300 , TraesCS2D02G361600 , TraesCS5B02G216900 , TraesCS7D02G208000 , TraesCS7D02G027000 , TraesCS2B02G381800 , TraesCS4D02G359100 , TraesCS4A02G322200 , TraesCS7D02G130100 , TraesCS6B02G324600 , TraesCS6B02G324600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G043000 heat shock protein-related, putative, expressed -
2 Sobic.010G272300 cysteine-rich receptor-like protein kinase 28 precursor, putative, expressed -
3 Sobic.002G233100 expressed protein -
4 Sobic.003G366600 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
5 Sobic.010G110800 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.004G176600 no apical meristem protein, putative, expressed -
7 Sobic.002G310600 chalcone synthase, putative, expressed K17212: bisdemethoxycurcumin synthase
8 Sobic.009G072900 calmodulin-binding protein, putative, expressed -
9 Sobic.005G084600 ARGOS, putative, expressed -
10 Sobic.006G044100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.003G015300 expressed protein -
12 Sobic.006G125100 ubiquitin family protein, putative, expressed -
13 Sobic.003G404600 regulatory protein, putative, expressed -
14 Sobic.001G403000 expressed protein -
15 Sobic.010G185000 VQ domain containing protein, putative, expressed -
16 Sobic.002G312900 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
17 Sobic.001G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bHelix-loop-helix transcription factor, putative, expressed -
18 Sobic.003G011600 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed K00606: 3-methyl-2-oxobutanoate hydroxymethyltransferase
19 Sobic.001G147900 cytochrome P450, putative, expressed -
20 Sobic.006G059700 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase


Gene co-expression network
sample Sobic002G196100 Sobic002G196100 Sobic005G043000 Sobic005G043000 Sobic002G196100--Sobic005G043000 Sobic010G272300 Sobic010G272300 Sobic002G196100--Sobic010G272300 Sobic002G233100 Sobic002G233100 Sobic002G196100--Sobic002G233100 Sobic003G366600 Sobic003G366600 Sobic002G196100--Sobic003G366600 Sobic010G110800 Sobic010G110800 Sobic002G196100--Sobic010G110800 Sobic004G176600 Sobic004G176600 Sobic002G196100--Sobic004G176600 Sobic002G310600 Sobic002G310600 Sobic002G196100--Sobic002G310600 Sobic009G072900 Sobic009G072900 Sobic002G196100--Sobic009G072900 Sobic005G084600 Sobic005G084600 Sobic002G196100--Sobic005G084600 Sobic002G312900 Sobic002G312900 Sobic005G043000--Sobic002G312900 Sobic005G043000--Sobic010G272300 Sobic006G059700 Sobic006G059700 Sobic005G043000--Sobic006G059700 Sobic007G161400 Sobic007G161400 Sobic005G043000--Sobic007G161400 Sobic005G043000--Sobic002G196100 Sobic001G147900 Sobic001G147900 Sobic005G043000--Sobic001G147900 Sobic001G082600 Sobic001G082600 Sobic005G043000--Sobic001G082600 Sobic008G128900 Sobic008G128900 Sobic005G043000--Sobic008G128900 Sobic005G043000--Sobic003G366600 Sobic010G272300--Sobic010G110800 Sobic010G272300--Sobic006G059700 Sobic010G272300--Sobic001G147900 Sobic010G272300--Sobic005G043000 Sobic003G280400 Sobic003G280400 Sobic010G272300--Sobic003G280400 Sobic006G256900 Sobic006G256900 Sobic010G272300--Sobic006G256900 Sobic010G272300--Sobic001G082600 Sobic003G011600 Sobic003G011600 Sobic010G272300--Sobic003G011600 Sobic003G404600 Sobic003G404600 Sobic010G272300--Sobic003G404600 Sobic004G001000 Sobic004G001000 Sobic002G233100--Sobic004G001000 Sobic002G233100--Sobic003G366600 Sobic003G184100 Sobic003G184100 Sobic002G233100--Sobic003G184100 Sobic002G233100--Sobic002G312900 Sobic002G233100--Sobic005G043000 Sobic002G233100--Sobic002G196100 Sobic002G233100--Sobic003G404600 Sobic002G233100--Sobic007G161400 Sobic002G233100--Sobic006G059700 Sobic004G348400 Sobic004G348400 Sobic003G366600--Sobic004G348400 Sobic006G044100 Sobic006G044100 Sobic003G366600--Sobic006G044100 Sobic006G157900 Sobic006G157900 Sobic003G366600--Sobic006G157900 Sobic010G185000 Sobic010G185000 Sobic003G366600--Sobic010G185000 Sobic003G366600--Sobic003G404600 Sobic001G481400 Sobic001G481400 Sobic003G366600--Sobic001G481400 Sobic001G403000 Sobic001G403000 Sobic003G366600--Sobic001G403000 Sobic003G366600--Sobic009G072900 Sobic003G366600--Sobic006G059700 Sobic003G015300 Sobic003G015300 Sobic010G110800--Sobic003G015300 Sobic002G001700 Sobic002G001700 Sobic010G110800--Sobic002G001700 Sobic010G110800--Sobic010G272300 Sobic005G065900 Sobic005G065900 Sobic010G110800--Sobic005G065900 Sobic010G110800--Sobic003G280400 Sobic010G110800--Sobic006G256900 Sobic006G197100 Sobic006G197100 Sobic010G110800--Sobic006G197100 Sobic006G125100 Sobic006G125100 Sobic010G110800--Sobic006G125100 Sobic002G185800 Sobic002G185800 Sobic010G110800--Sobic002G185800 Sobic004G176600--Sobic006G044100 Sobic002G375400 Sobic002G375400 Sobic004G176600--Sobic002G375400 Sobic004G107700 Sobic004G107700 Sobic004G176600--Sobic004G107700 Sobic004G176600--Sobic005G084600 Sobic003G255200 Sobic003G255200 Sobic004G176600--Sobic003G255200 Sobic003G437200 Sobic003G437200 Sobic004G176600--Sobic003G437200 Sobic003G417800 Sobic003G417800 Sobic004G176600--Sobic003G417800 Sobic004G176600--Sobic010G185000 Sobic004G176600--Sobic004G348400 Sobic002G310600--Sobic004G176600 Sobic002G247600 Sobic002G247600 Sobic002G310600--Sobic002G247600 Sobic002G310600--Sobic005G084600 Sobic002G310600--Sobic009G072900 Sobic005G206601 Sobic005G206601 Sobic002G310600--Sobic005G206601 Sobic002G310600--Sobic001G403000 Sobic002G310600--Sobic006G044100 Sobic002G310600--Sobic003G366600 Sobic002G310600--Sobic010G185000 Sobic009G072900--Sobic001G403000 Sobic009G072900--Sobic002G375400 Sobic009G072900--Sobic010G185000 Sobic009G072900--Sobic005G206601 Sobic009G072900--Sobic004G348400 Sobic006G243600 Sobic006G243600 Sobic009G072900--Sobic006G243600 Sobic009G072900--Sobic003G366600 Sobic009G240600 Sobic009G240600 Sobic009G072900--Sobic009G240600 Sobic003G430600 Sobic003G430600 Sobic009G072900--Sobic003G430600 Sobic005G084600--Sobic004G176600 Sobic001G339700 Sobic001G339700 Sobic005G084600--Sobic001G339700 Sobic009G120000 Sobic009G120000 Sobic005G084600--Sobic009G120000 Sobic008G032100 Sobic008G032100 Sobic005G084600--Sobic008G032100 Sobic005G084600--Sobic005G206601 Sobic005G084600--Sobic002G375400 Sobic010G009300 Sobic010G009300 Sobic005G084600--Sobic010G009300 Sobic005G084600--Sobic010G185000 Sobic005G084600--Sobic003G417800
Octagon: transcription factors


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