Gene annotation
Transcriptome id Sobic.002G310600.1
Synonym CHS, Sb02g034030, ATCHS, TT4
Functional annotation chalcone synthase, putative, expressed
UniProt C5X9A8
Pfam PF08541 PF08545
Panther DB PTHR11877 PTHR11877:SF30
NCBI CDD -
KEGG Orthology K17212; bisdemethoxycurcumin synthase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008610lipid biosynthetic process GO:0006633fatty acid biosynthetic process GO:00043153-oxoacyl-[acyl-carrier-protein] synthase activity


Orthologs (automatic annotation)
TAIR AT5G13930 : Chalcone and stilbene synthase family protein
RAP-DB (Rice) LOC_Os07g17010.1 : chalcone synthase, putative, expressed
MaizeGDB (Corn) Zm00025a033584 , Zm00025a048134
Brachypodium -
Barley HORVU4Hr1G003250.2 , HORVU4Hr1G003250.1 , HORVU6Hr1G074060.1 , HORVU6Hr1G074060.3 , HORVU6Hr1G074060.2 , HORVU6Hr1G055000.2 , HORVU6Hr1G055000.3 , HORVU6Hr1G055000.1 , HORVU6Hr1G055000.4 , HORVU6Hr1G055000.5
Wheat TraesCS6A02G215600 , TraesCS6A02G298400 , TraesCS6D02G278200 , TraesCS4B02G021600 , TraesCS6B02G245200 , TraesCS5B02G487700 , TraesCS4B02G357100 , TraesCS1D02G359600 , TraesCS6B02G327900 , TraesCS6B02G022300 , TraesCS4A02G292500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G176600 no apical meristem protein, putative, expressed -
2 Sobic.002G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed K01188: beta-glucosidase
3 Sobic.005G084600 ARGOS, putative, expressed -
4 Sobic.009G072900 calmodulin-binding protein, putative, expressed -
5 Sobic.005G206601 - -
6 Sobic.001G403000 expressed protein -
7 Sobic.006G044100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
8 Sobic.003G366600 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
9 Sobic.010G185000 VQ domain containing protein, putative, expressed -
10 Sobic.003G437100 sulfotransferase domain containing protein, expressed -
11 Sobic.002G312900 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
12 Sobic.004G348400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
13 Sobic.003G426300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.009G003600 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
15 Sobic.009G106800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
16 Sobic.002G196100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.003G011600 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed K00606: 3-methyl-2-oxobutanoate hydroxymethyltransferase
18 Sobic.006G125100 ubiquitin family protein, putative, expressed -
19 Sobic.003G430600 OsCML19 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
20 Sobic.005G043000 heat shock protein-related, putative, expressed -


Gene co-expression network
sample Sobic002G310600 Sobic002G310600 Sobic004G176600 Sobic004G176600 Sobic002G310600--Sobic004G176600 Sobic002G247600 Sobic002G247600 Sobic002G310600--Sobic002G247600 Sobic005G084600 Sobic005G084600 Sobic002G310600--Sobic005G084600 Sobic009G072900 Sobic009G072900 Sobic002G310600--Sobic009G072900 Sobic005G206601 Sobic005G206601 Sobic002G310600--Sobic005G206601 Sobic001G403000 Sobic001G403000 Sobic002G310600--Sobic001G403000 Sobic006G044100 Sobic006G044100 Sobic002G310600--Sobic006G044100 Sobic003G366600 Sobic003G366600 Sobic002G310600--Sobic003G366600 Sobic010G185000 Sobic010G185000 Sobic002G310600--Sobic010G185000 Sobic004G176600--Sobic006G044100 Sobic002G375400 Sobic002G375400 Sobic004G176600--Sobic002G375400 Sobic004G107700 Sobic004G107700 Sobic004G176600--Sobic004G107700 Sobic004G176600--Sobic005G084600 Sobic003G255200 Sobic003G255200 Sobic004G176600--Sobic003G255200 Sobic003G437200 Sobic003G437200 Sobic004G176600--Sobic003G437200 Sobic003G417800 Sobic003G417800 Sobic004G176600--Sobic003G417800 Sobic004G176600--Sobic010G185000 Sobic004G348400 Sobic004G348400 Sobic004G176600--Sobic004G348400 Sobic001G462700 Sobic001G462700 Sobic002G247600--Sobic001G462700 Sobic002G247600--Sobic010G185000 Sobic009G003600 Sobic009G003600 Sobic002G247600--Sobic009G003600 Sobic002G247600--Sobic004G348400 Sobic001G331200 Sobic001G331200 Sobic002G247600--Sobic001G331200 Sobic001G333400 Sobic001G333400 Sobic002G247600--Sobic001G333400 Sobic007G151300 Sobic007G151300 Sobic002G247600--Sobic007G151300 Sobic002G247600--Sobic005G206601 Sobic003G117600 Sobic003G117600 Sobic002G247600--Sobic003G117600 Sobic005G084600--Sobic004G176600 Sobic001G339700 Sobic001G339700 Sobic005G084600--Sobic001G339700 Sobic009G120000 Sobic009G120000 Sobic005G084600--Sobic009G120000 Sobic008G032100 Sobic008G032100 Sobic005G084600--Sobic008G032100 Sobic005G084600--Sobic005G206601 Sobic005G084600--Sobic002G375400 Sobic010G009300 Sobic010G009300 Sobic005G084600--Sobic010G009300 Sobic005G084600--Sobic010G185000 Sobic005G084600--Sobic003G417800 Sobic009G072900--Sobic001G403000 Sobic009G072900--Sobic002G375400 Sobic009G072900--Sobic010G185000 Sobic009G072900--Sobic005G206601 Sobic009G072900--Sobic004G348400 Sobic006G243600 Sobic006G243600 Sobic009G072900--Sobic006G243600 Sobic009G072900--Sobic003G366600 Sobic009G240600 Sobic009G240600 Sobic009G072900--Sobic009G240600 Sobic003G430600 Sobic003G430600 Sobic009G072900--Sobic003G430600 Sobic007G227300 Sobic007G227300 Sobic005G206601--Sobic007G227300 Sobic003G252800 Sobic003G252800 Sobic005G206601--Sobic003G252800 Sobic005G206601--Sobic003G117600 Sobic006G099900 Sobic006G099900 Sobic005G206601--Sobic006G099900 Sobic006G277600 Sobic006G277600 Sobic005G206601--Sobic006G277600 Sobic001G348700 Sobic001G348700 Sobic005G206601--Sobic001G348700 Sobic005G206601--Sobic009G240600 Sobic010G084700 Sobic010G084700 Sobic005G206601--Sobic010G084700 Sobic001G400800 Sobic001G400800 Sobic005G206601--Sobic001G400800 Sobic001G487300 Sobic001G487300 Sobic001G403000--Sobic001G487300 Sobic001G403000--Sobic009G072900 Sobic008G063400 Sobic008G063400 Sobic001G403000--Sobic008G063400 Sobic001G403000--Sobic003G437200 Sobic001G403000--Sobic005G206601 Sobic001G403000--Sobic009G240600 Sobic001G403000--Sobic002G375400 Sobic001G403000--Sobic003G417800 Sobic001G403000--Sobic010G185000 Sobic004G046200 Sobic004G046200 Sobic006G044100--Sobic004G046200 Sobic006G044100--Sobic004G176600 Sobic009G187200 Sobic009G187200 Sobic006G044100--Sobic009G187200 Sobic001G481400 Sobic001G481400 Sobic006G044100--Sobic001G481400 Sobic008G106700 Sobic008G106700 Sobic006G044100--Sobic008G106700 Sobic006G044100--Sobic003G366600 Sobic008G172600 Sobic008G172600 Sobic006G044100--Sobic008G172600 Sobic006G044100--Sobic006G277600 Sobic006G044100--Sobic003G255200 Sobic003G366600--Sobic004G348400 Sobic003G366600--Sobic006G044100 Sobic006G157900 Sobic006G157900 Sobic003G366600--Sobic006G157900 Sobic003G366600--Sobic010G185000 Sobic003G404600 Sobic003G404600 Sobic003G366600--Sobic003G404600 Sobic003G366600--Sobic001G481400 Sobic003G366600--Sobic001G403000 Sobic003G366600--Sobic009G072900 Sobic006G059700 Sobic006G059700 Sobic003G366600--Sobic006G059700 Sobic010G185000--Sobic002G247600 Sobic005G018700 Sobic005G018700 Sobic010G185000--Sobic005G018700 Sobic010G185000--Sobic007G227300 Sobic010G185000--Sobic009G240600 Sobic010G185000--Sobic004G348400 Sobic010G185000--Sobic002G375400 Sobic010G185000--Sobic001G481400 Sobic010G185000--Sobic005G206601 Sobic010G185000--Sobic007G151300
Octagon: transcription factors


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