Gene annotation
Transcriptome id Sobic.005G043000.1
Synonym Sb05g003570
Functional annotation heat shock protein-related, putative, expressed
UniProt C5Y530
Pfam PF02861
Panther DB PTHR11638 PTHR11638:SF115
NCBI CDD KOG1051; Chaperone HSP104 and related ATP-dependent Clp proteases
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52490 : Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os11g05820.1 : transposon protein, putative, Mutator sub-class, expressed
MaizeGDB (Corn) Zm00025a011475 , Zm00025a029038 , Zm00025a056015 , Zm00025a033537 , Zm00025a020580
Brachypodium KQJ99403 , KQJ99771 , KQJ82557
Barley HORVU4Hr1G021370.9 , HORVU4Hr1G021370.8 , HORVU4Hr1G021370.1 , HORVU4Hr1G021370.4 , HORVU4Hr1G021370.6 , HORVU2Hr1G073780.3 , HORVU2Hr1G073780.5 , HORVU2Hr1G073780.6
Wheat TraesCS4D02G114100 , TraesCS4B02G116400 , TraesCS2B02G313800 , TraesCS2D02G295600 , TraesCS2A02G297600 , TraesCS4A02G199000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G312900 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
2 Sobic.010G272300 cysteine-rich receptor-like protein kinase 28 precursor, putative, expressed -
3 Sobic.006G059700 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
4 Sobic.007G161400 Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
K13348: protein Mpv17
5 Sobic.002G196100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.001G147900 cytochrome P450, putative, expressed -
7 Sobic.001G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bHelix-loop-helix transcription factor, putative, expressed -
8 Sobic.008G128900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
9 Sobic.003G366600 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
10 Sobic.010G110800 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.003G404600 regulatory protein, putative, expressed -
12 Sobic.006G125100 ubiquitin family protein, putative, expressed -
13 Sobic.002G233100 expressed protein -
14 Sobic.001G295800 expressed protein -
15 Sobic.006G044100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.005G084600 ARGOS, putative, expressed -
17 Sobic.003G280400 hexokinase, putative, expressed K00844: hexokinase
18 Sobic.004G176600 no apical meristem protein, putative, expressed -
19 Sobic.003G430800 expressed protein -
20 Sobic.003G079400 Ser/Thr protein kinase, putative, expressed -


Gene co-expression network
sample Sobic005G043000 Sobic005G043000 Sobic002G312900 Sobic002G312900 Sobic005G043000--Sobic002G312900 Sobic010G272300 Sobic010G272300 Sobic005G043000--Sobic010G272300 Sobic006G059700 Sobic006G059700 Sobic005G043000--Sobic006G059700 Sobic007G161400 Sobic007G161400 Sobic005G043000--Sobic007G161400 Sobic002G196100 Sobic002G196100 Sobic005G043000--Sobic002G196100 Sobic001G147900 Sobic001G147900 Sobic005G043000--Sobic001G147900 Sobic001G082600 Sobic001G082600 Sobic005G043000--Sobic001G082600 Sobic008G128900 Sobic008G128900 Sobic005G043000--Sobic008G128900 Sobic003G366600 Sobic003G366600 Sobic005G043000--Sobic003G366600 Sobic004G176600 Sobic004G176600 Sobic002G312900--Sobic004G176600 Sobic002G312900--Sobic008G128900 Sobic010G195500 Sobic010G195500 Sobic002G312900--Sobic010G195500 Sobic002G312900--Sobic005G043000 Sobic003G416300 Sobic003G416300 Sobic002G312900--Sobic003G416300 Sobic002G312900--Sobic006G059700 Sobic002G312900--Sobic003G366600 Sobic002G312900--Sobic001G147900 Sobic005G084600 Sobic005G084600 Sobic002G312900--Sobic005G084600 Sobic010G110800 Sobic010G110800 Sobic010G272300--Sobic010G110800 Sobic010G272300--Sobic006G059700 Sobic010G272300--Sobic001G147900 Sobic010G272300--Sobic005G043000 Sobic003G280400 Sobic003G280400 Sobic010G272300--Sobic003G280400 Sobic006G256900 Sobic006G256900 Sobic010G272300--Sobic006G256900 Sobic010G272300--Sobic001G082600 Sobic003G011600 Sobic003G011600 Sobic010G272300--Sobic003G011600 Sobic003G404600 Sobic003G404600 Sobic010G272300--Sobic003G404600 Sobic006G059700--Sobic003G404600 Sobic004G262200 Sobic004G262200 Sobic006G059700--Sobic004G262200 Sobic006G059700--Sobic003G280400 Sobic006G059700--Sobic010G272300 Sobic010G001000 Sobic010G001000 Sobic006G059700--Sobic010G001000 Sobic006G059700--Sobic003G366600 Sobic006G059700--Sobic001G147900 Sobic006G125100 Sobic006G125100 Sobic006G059700--Sobic006G125100 Sobic006G059700--Sobic002G312900 Sobic007G161400--Sobic003G280400 Sobic007G161400--Sobic008G128900 Sobic007G161400--Sobic006G059700 Sobic004G042000 Sobic004G042000 Sobic007G161400--Sobic004G042000 Sobic007G161400--Sobic005G043000 Sobic007G078100 Sobic007G078100 Sobic007G161400--Sobic007G078100 Sobic007G161400--Sobic002G312900 Sobic003G363800 Sobic003G363800 Sobic007G161400--Sobic003G363800 Sobic004G051700 Sobic004G051700 Sobic007G161400--Sobic004G051700 Sobic002G196100--Sobic005G043000 Sobic002G196100--Sobic010G272300 Sobic002G233100 Sobic002G233100 Sobic002G196100--Sobic002G233100 Sobic002G196100--Sobic003G366600 Sobic002G196100--Sobic010G110800 Sobic002G196100--Sobic004G176600 Sobic002G310600 Sobic002G310600 Sobic002G196100--Sobic002G310600 Sobic009G072900 Sobic009G072900 Sobic002G196100--Sobic009G072900 Sobic002G196100--Sobic005G084600 Sobic003G368600 Sobic003G368600 Sobic001G147900--Sobic003G368600 Sobic006G197100 Sobic006G197100 Sobic001G147900--Sobic006G197100 Sobic001G147900--Sobic003G404600 Sobic006G243600 Sobic006G243600 Sobic001G147900--Sobic006G243600 Sobic002G003800 Sobic002G003800 Sobic001G147900--Sobic002G003800 Sobic003G152200 Sobic003G152200 Sobic001G147900--Sobic003G152200 Sobic001G147900--Sobic006G256900 Sobic004G348400 Sobic004G348400 Sobic001G147900--Sobic004G348400 Sobic001G147900--Sobic006G059700 Sobic003G079400 Sobic003G079400 Sobic001G082600--Sobic003G079400 Sobic004G046200 Sobic004G046200 Sobic001G082600--Sobic004G046200 Sobic006G044100 Sobic006G044100 Sobic001G082600--Sobic006G044100 Sobic001G082600--Sobic003G011600 Sobic003G255200 Sobic003G255200 Sobic001G082600--Sobic003G255200 Sobic007G215900 Sobic007G215900 Sobic001G082600--Sobic007G215900 Sobic008G106700 Sobic008G106700 Sobic001G082600--Sobic008G106700 Sobic001G082600--Sobic004G176600 Sobic009G179900 Sobic009G179900 Sobic001G082600--Sobic009G179900 Sobic008G128900--Sobic002G312900 Sobic008G128900--Sobic007G161400 Sobic008G128900--Sobic003G416300 Sobic001G494000 Sobic001G494000 Sobic008G128900--Sobic001G494000 Sobic008G128900--Sobic005G043000 Sobic007G127100 Sobic007G127100 Sobic008G128900--Sobic007G127100 Sobic008G128900--Sobic003G363800 Sobic008G128900--Sobic010G195500 Sobic008G128900--Sobic003G280400 Sobic003G366600--Sobic004G348400 Sobic003G366600--Sobic006G044100 Sobic006G157900 Sobic006G157900 Sobic003G366600--Sobic006G157900 Sobic010G185000 Sobic010G185000 Sobic003G366600--Sobic010G185000 Sobic003G366600--Sobic003G404600 Sobic001G481400 Sobic001G481400 Sobic003G366600--Sobic001G481400 Sobic001G403000 Sobic001G403000 Sobic003G366600--Sobic001G403000 Sobic003G366600--Sobic009G072900 Sobic003G366600--Sobic006G059700
Octagon: transcription factors


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