Gene annotation
Transcriptome id Sobic.007G161400.1,Sobic.007G161400.2
Synonym Sb07g023460
Functional annotation Mpv17 / PMP22 family domain containing protein, expressed
UniProt A0A1B6PI37 , A0A1B6PI98
Pfam PF04117
Panther DB PTHR11266 PTHR11266:SF15
NCBI CDD KOG1944; Peroxisomal membrane protein MPV17 and related proteins
KEGG Orthology K13347; PXMP2, peroxisomal membrane protein 2 K13348protein Mpv17
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT4G14305 : Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
RAP-DB (Rice) LOC_Os08g45210.1 : Mpv17 / PMP22 family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a030481
Brachypodium KQJ94720
Barley HORVU5Hr1G016400.12 , HORVU5Hr1G016400.13 , HORVU5Hr1G016400.10 , HORVU5Hr1G016400.11 , HORVU5Hr1G016400.1 , HORVU5Hr1G016400.2 , HORVU5Hr1G016400.3 , HORVU5Hr1G016400.4 , HORVU5Hr1G016400.5 , HORVU5Hr1G016400.6 , HORVU5Hr1G016400.7 , HORVU5Hr1G016400.8 , HORVU5Hr1G016400.9
Wheat TraesCS5D02G072500 , TraesCS5A02G061000 , TraesCS5A02G061000 , TraesCS5B02G071100
Populus -


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cDNA sequences
Sobic.007G161400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G280400 hexokinase, putative, expressed K00844: hexokinase
2 Sobic.008G128900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
3 Sobic.006G059700 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
4 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
5 Sobic.005G043000 heat shock protein-related, putative, expressed -
6 Sobic.007G078100 UPF0041 domain containing protein, putative, expressed -
7 Sobic.002G312900 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
8 Sobic.003G363800 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
9 Sobic.004G051700 OTU-like cysteine protease family protein, putative, expressed K13719: OTU1, ubiquitin thioesterase OTU1
10 Sobic.002G257300 ribulose-phosphate 3-epimerase, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
11 Sobic.010G195500 reductase, putative, expressed -
12 Sobic.003G184100 auxin-induced protein 5NG4, putative, expressed -
13 Sobic.001G063200 VQ domain containing protein, putative, expressed -
14 Sobic.006G197100 DNA binding protein, putative, expressed -
15 Sobic.003G079400 Ser/Thr protein kinase, putative, expressed -
16 Sobic.007G204700 expressed protein -
17 Sobic.010G110800 plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.002G327300 expressed protein -
19 Sobic.003G228200 cytochrome P450 72A1, putative, expressed -
20 Sobic.005G188100 peptidase, T1 family, putative, expressed K02729: 20S proteasome subunit alpha 5


Gene co-expression network
sample Sobic007G161400 Sobic007G161400 Sobic003G280400 Sobic003G280400 Sobic007G161400--Sobic003G280400 Sobic008G128900 Sobic008G128900 Sobic007G161400--Sobic008G128900 Sobic006G059700 Sobic006G059700 Sobic007G161400--Sobic006G059700 Sobic004G042000 Sobic004G042000 Sobic007G161400--Sobic004G042000 Sobic005G043000 Sobic005G043000 Sobic007G161400--Sobic005G043000 Sobic007G078100 Sobic007G078100 Sobic007G161400--Sobic007G078100 Sobic002G312900 Sobic002G312900 Sobic007G161400--Sobic002G312900 Sobic003G363800 Sobic003G363800 Sobic007G161400--Sobic003G363800 Sobic004G051700 Sobic004G051700 Sobic007G161400--Sobic004G051700 Sobic003G280400--Sobic007G161400 Sobic003G280400--Sobic006G059700 Sobic010G110800 Sobic010G110800 Sobic003G280400--Sobic010G110800 Sobic007G204700 Sobic007G204700 Sobic003G280400--Sobic007G204700 Sobic010G272300 Sobic010G272300 Sobic003G280400--Sobic010G272300 Sobic001G264000 Sobic001G264000 Sobic003G280400--Sobic001G264000 Sobic005G065900 Sobic005G065900 Sobic003G280400--Sobic005G065900 Sobic006G197100 Sobic006G197100 Sobic003G280400--Sobic006G197100 Sobic006G256900 Sobic006G256900 Sobic003G280400--Sobic006G256900 Sobic008G128900--Sobic002G312900 Sobic008G128900--Sobic007G161400 Sobic003G416300 Sobic003G416300 Sobic008G128900--Sobic003G416300 Sobic001G494000 Sobic001G494000 Sobic008G128900--Sobic001G494000 Sobic008G128900--Sobic005G043000 Sobic007G127100 Sobic007G127100 Sobic008G128900--Sobic007G127100 Sobic008G128900--Sobic003G363800 Sobic010G195500 Sobic010G195500 Sobic008G128900--Sobic010G195500 Sobic008G128900--Sobic003G280400 Sobic003G404600 Sobic003G404600 Sobic006G059700--Sobic003G404600 Sobic004G262200 Sobic004G262200 Sobic006G059700--Sobic004G262200 Sobic006G059700--Sobic003G280400 Sobic006G059700--Sobic010G272300 Sobic010G001000 Sobic010G001000 Sobic006G059700--Sobic010G001000 Sobic003G366600 Sobic003G366600 Sobic006G059700--Sobic003G366600 Sobic001G147900 Sobic001G147900 Sobic006G059700--Sobic001G147900 Sobic006G125100 Sobic006G125100 Sobic006G059700--Sobic006G125100 Sobic006G059700--Sobic002G312900 Sobic004G042000--Sobic006G197100 Sobic002G003800 Sobic002G003800 Sobic004G042000--Sobic002G003800 Sobic004G349125 Sobic004G349125 Sobic004G042000--Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic004G042000--Sobic001G416200 Sobic002G213600 Sobic002G213600 Sobic004G042000--Sobic002G213600 Sobic001G302600 Sobic001G302600 Sobic004G042000--Sobic001G302600 Sobic003G311800 Sobic003G311800 Sobic004G042000--Sobic003G311800 Sobic001G304201 Sobic001G304201 Sobic004G042000--Sobic001G304201 Sobic004G042000--Sobic001G264000 Sobic005G043000--Sobic002G312900 Sobic005G043000--Sobic010G272300 Sobic005G043000--Sobic006G059700 Sobic005G043000--Sobic007G161400 Sobic002G196100 Sobic002G196100 Sobic005G043000--Sobic002G196100 Sobic005G043000--Sobic001G147900 Sobic001G082600 Sobic001G082600 Sobic005G043000--Sobic001G082600 Sobic005G043000--Sobic008G128900 Sobic005G043000--Sobic003G366600 Sobic004G276100 Sobic004G276100 Sobic007G078100--Sobic004G276100 Sobic002G257300 Sobic002G257300 Sobic007G078100--Sobic002G257300 Sobic007G078100--Sobic007G161400 Sobic010G154700 Sobic010G154700 Sobic007G078100--Sobic010G154700 Sobic004G272800 Sobic004G272800 Sobic007G078100--Sobic004G272800 Sobic007G078100--Sobic004G051700 Sobic005G188100 Sobic005G188100 Sobic007G078100--Sobic005G188100 Sobic001G132100 Sobic001G132100 Sobic007G078100--Sobic001G132100 Sobic001G048832 Sobic001G048832 Sobic007G078100--Sobic001G048832 Sobic004G176600 Sobic004G176600 Sobic002G312900--Sobic004G176600 Sobic002G312900--Sobic008G128900 Sobic002G312900--Sobic010G195500 Sobic002G312900--Sobic005G043000 Sobic002G312900--Sobic003G416300 Sobic002G312900--Sobic006G059700 Sobic002G312900--Sobic003G366600 Sobic002G312900--Sobic001G147900 Sobic005G084600 Sobic005G084600 Sobic002G312900--Sobic005G084600 Sobic003G346600 Sobic003G346600 Sobic003G363800--Sobic003G346600 Sobic006G137100 Sobic006G137100 Sobic003G363800--Sobic006G137100 Sobic007G178600 Sobic007G178600 Sobic003G363800--Sobic007G178600 Sobic002G047600 Sobic002G047600 Sobic003G363800--Sobic002G047600 Sobic003G387900 Sobic003G387900 Sobic003G363800--Sobic003G387900 Sobic009G076400 Sobic009G076400 Sobic003G363800--Sobic009G076400 Sobic001G085400 Sobic001G085400 Sobic003G363800--Sobic001G085400 Sobic004G331400 Sobic004G331400 Sobic003G363800--Sobic004G331400 Sobic006G216600 Sobic006G216600 Sobic003G363800--Sobic006G216600 Sobic010G012500 Sobic010G012500 Sobic004G051700--Sobic010G012500 Sobic002G190900 Sobic002G190900 Sobic004G051700--Sobic002G190900 Sobic004G051700--Sobic001G048832 Sobic007G051000 Sobic007G051000 Sobic004G051700--Sobic007G051000 Sobic004G211833 Sobic004G211833 Sobic004G051700--Sobic004G211833 Sobic002G398901 Sobic002G398901 Sobic004G051700--Sobic002G398901 Sobic004G051700--Sobic002G257300 Sobic002G175100 Sobic002G175100 Sobic004G051700--Sobic002G175100 Sobic010G204500 Sobic010G204500 Sobic004G051700--Sobic010G204500
Octagon: transcription factors


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