Gene annotation
Transcriptome id Sobic.001G295800.1
Synonym Sb01g028890
Functional annotation expressed protein
UniProt C6JRZ1 , C5WRI1 , A0A109NDL7
Pfam PF13947
Panther DB PTHR33355 PTHR33355:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G50290 : -
RAP-DB (Rice) LOC_Os05g33860.1 : expressed protein
MaizeGDB (Corn) Zm00025a003376
Brachypodium KQJ98916
Barley HORVU1Hr1G060580.2
Wheat TraesCS1B02G266700 , TraesCS1D02G255300 , TraesCS1A02G256000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G043000 heat shock protein-related, putative, expressed -
2 Sobic.001G514200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.001G481000 expressed protein -
4 Sobic.003G307400 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
5 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.009G221800 reticulon domain containing protein, putative, expressed -
7 Sobic.009G130300 AWPM-19-like membrane family protein, putative, expressed -
8 Sobic.003G052900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@-(PubMedID : 23108465)@LOB family(PubMedID : 16399802)@DUF260 domain containing protein, putative, expressed -
9 Sobic.009G248100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.008G055100 dirigent, putative, expressed -
11 Sobic.004G050700 plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.004G266200 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
13 Sobic.010G110800 plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.003G027400 VQ domain containing protein, putative, expressed -
15 Sobic.002G231600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.003G034600 CAMK_CAMK_like_Aur_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
17 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
18 Sobic.006G125100 ubiquitin family protein, putative, expressed -
19 Sobic.001G245800 expressed protein -
20 Sobic.001G455100 expressed protein -


Gene co-expression network
sample Sobic001G295800 Sobic001G295800 Sobic005G043000 Sobic005G043000 Sobic001G295800--Sobic005G043000 Sobic001G514200 Sobic001G514200 Sobic001G295800--Sobic001G514200 Sobic001G481000 Sobic001G481000 Sobic001G295800--Sobic001G481000 Sobic003G307400 Sobic003G307400 Sobic001G295800--Sobic003G307400 Sobic001G310300 Sobic001G310300 Sobic001G295800--Sobic001G310300 Sobic009G221800 Sobic009G221800 Sobic001G295800--Sobic009G221800 Sobic009G130300 Sobic009G130300 Sobic001G295800--Sobic009G130300 Sobic003G052900 Sobic003G052900 Sobic001G295800--Sobic003G052900 Sobic009G248100 Sobic009G248100 Sobic001G295800--Sobic009G248100 Sobic002G312900 Sobic002G312900 Sobic005G043000--Sobic002G312900 Sobic010G272300 Sobic010G272300 Sobic005G043000--Sobic010G272300 Sobic006G059700 Sobic006G059700 Sobic005G043000--Sobic006G059700 Sobic007G161400 Sobic007G161400 Sobic005G043000--Sobic007G161400 Sobic002G196100 Sobic002G196100 Sobic005G043000--Sobic002G196100 Sobic001G147900 Sobic001G147900 Sobic005G043000--Sobic001G147900 Sobic001G082600 Sobic001G082600 Sobic005G043000--Sobic001G082600 Sobic008G128900 Sobic008G128900 Sobic005G043000--Sobic008G128900 Sobic003G366600 Sobic003G366600 Sobic005G043000--Sobic003G366600 Sobic008G055100 Sobic008G055100 Sobic001G514200--Sobic008G055100 Sobic010G047600 Sobic010G047600 Sobic001G514200--Sobic010G047600 Sobic001G261460 Sobic001G261460 Sobic001G514200--Sobic001G261460 Sobic001G514200--Sobic001G310300 Sobic010G138300 Sobic010G138300 Sobic001G514200--Sobic010G138300 Sobic001G514200--Sobic009G221800 Sobic005G061200 Sobic005G061200 Sobic001G514200--Sobic005G061200 Sobic007G176000 Sobic007G176000 Sobic001G514200--Sobic007G176000 Sobic002G154600 Sobic002G154600 Sobic001G514200--Sobic002G154600 Sobic001G304100 Sobic001G304100 Sobic001G481000--Sobic001G304100 Sobic001G481000--Sobic001G310300 Sobic010G184800 Sobic010G184800 Sobic001G481000--Sobic010G184800 Sobic004G203700 Sobic004G203700 Sobic001G481000--Sobic004G203700 Sobic009G188000 Sobic009G188000 Sobic001G481000--Sobic009G188000 Sobic003G027400 Sobic003G027400 Sobic001G481000--Sobic003G027400 Sobic003G321200 Sobic003G321200 Sobic001G481000--Sobic003G321200 Sobic002G213600 Sobic002G213600 Sobic001G481000--Sobic002G213600 Sobic003G160700 Sobic003G160700 Sobic001G481000--Sobic003G160700 Sobic003G307400--Sobic010G138300 Sobic003G307400--Sobic001G514200 Sobic003G121000 Sobic003G121000 Sobic003G307400--Sobic003G121000 Sobic006G119000 Sobic006G119000 Sobic003G307400--Sobic006G119000 Sobic008G135300 Sobic008G135300 Sobic003G307400--Sobic008G135300 Sobic003G034600 Sobic003G034600 Sobic003G307400--Sobic003G034600 Sobic001G522700 Sobic001G522700 Sobic003G307400--Sobic001G522700 Sobic003G307400--Sobic001G295800 Sobic008G102800 Sobic008G102800 Sobic003G307400--Sobic008G102800 Sobic006G203700 Sobic006G203700 Sobic001G310300--Sobic006G203700 Sobic010G085800 Sobic010G085800 Sobic001G310300--Sobic010G085800 Sobic001G310300--Sobic001G514200 Sobic001G310300--Sobic008G055100 Sobic001G310300--Sobic001G481000 Sobic009G109000 Sobic009G109000 Sobic001G310300--Sobic009G109000 Sobic010G008400 Sobic010G008400 Sobic001G310300--Sobic010G008400 Sobic008G005100 Sobic008G005100 Sobic001G310300--Sobic008G005100 Sobic001G310300--Sobic003G160700 Sobic003G078900 Sobic003G078900 Sobic009G221800--Sobic003G078900 Sobic003G321400 Sobic003G321400 Sobic009G221800--Sobic003G321400 Sobic009G221800--Sobic010G047600 Sobic009G221800--Sobic001G261460 Sobic003G000200 Sobic003G000200 Sobic009G221800--Sobic003G000200 Sobic009G221800--Sobic001G514200 Sobic001G264300 Sobic001G264300 Sobic009G221800--Sobic001G264300 Sobic009G221800--Sobic009G130300 Sobic001G264400 Sobic001G264400 Sobic009G221800--Sobic001G264400 Sobic009G130300--Sobic003G000200 Sobic009G130300--Sobic009G221800 Sobic009G130300--Sobic003G078900 Sobic009G130300--Sobic001G310300 Sobic003G115200 Sobic003G115200 Sobic009G130300--Sobic003G115200 Sobic009G130300--Sobic001G514200 Sobic009G130300--Sobic003G321400 Sobic009G130300--Sobic001G261460 Sobic009G130300--Sobic010G047600 Sobic004G030300 Sobic004G030300 Sobic003G052900--Sobic004G030300 Sobic001G245800 Sobic001G245800 Sobic003G052900--Sobic001G245800 Sobic001G455100 Sobic001G455100 Sobic003G052900--Sobic001G455100 Sobic003G052900--Sobic008G135300 Sobic002G226500 Sobic002G226500 Sobic003G052900--Sobic002G226500 Sobic008G099100 Sobic008G099100 Sobic003G052900--Sobic008G099100 Sobic003G052900--Sobic001G295800 Sobic005G231300 Sobic005G231300 Sobic003G052900--Sobic005G231300 Sobic003G247600 Sobic003G247600 Sobic003G052900--Sobic003G247600 Sobic009G248100--Sobic003G027400 Sobic009G248100--Sobic003G321200 Sobic001G325400 Sobic001G325400 Sobic009G248100--Sobic001G325400 Sobic009G035200 Sobic009G035200 Sobic009G248100--Sobic009G035200 Sobic009G229000 Sobic009G229000 Sobic009G248100--Sobic009G229000 Sobic003G117600 Sobic003G117600 Sobic009G248100--Sobic003G117600 Sobic006G092500 Sobic006G092500 Sobic009G248100--Sobic006G092500 Sobic009G111000 Sobic009G111000 Sobic009G248100--Sobic009G111000 Sobic006G039100 Sobic006G039100 Sobic009G248100--Sobic006G039100
Octagon: transcription factors


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