Gene annotation
Transcriptome id Sobic.002G233100.1
Synonym Sb02g027230
Functional annotation expressed protein
UniProt C5X316
Pfam -
Panther DB PTHR33735 PTHR33735:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G14095 : -
RAP-DB (Rice) LOC_Os09g29380.2 : expressed protein
MaizeGDB (Corn) Zm00025a014123
Brachypodium KQJ90588 , KQJ90589 , KQJ90568 , KQJ90587
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G001000 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
2 Sobic.003G366600 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
3 Sobic.003G184100 auxin-induced protein 5NG4, putative, expressed -
4 Sobic.002G312900 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
5 Sobic.005G043000 heat shock protein-related, putative, expressed -
6 Sobic.002G196100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.003G404600 regulatory protein, putative, expressed -
8 Sobic.007G161400 Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
K13348: protein Mpv17
9 Sobic.006G059700 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
10 Sobic.006G125100 ubiquitin family protein, putative, expressed -
11 Sobic.002G155500 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
12 Sobic.006G044100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
13 Sobic.004G176600 no apical meristem protein, putative, expressed -
14 Sobic.008G032100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.010G185000 VQ domain containing protein, putative, expressed -
16 Sobic.010G110800 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.004G225500 bolA, putative, expressed K05527: BolA family transcriptional regulator, general stress-responsive regulator
18 Sobic.005G084600 ARGOS, putative, expressed -
19 Sobic.009G130100 CHIT17 - Chitinase family protein precursor, expressed K01183: chitinase
20 Sobic.005G092900 - -


Gene co-expression network
sample Sobic002G233100 Sobic002G233100 Sobic004G001000 Sobic004G001000 Sobic002G233100--Sobic004G001000 Sobic003G366600 Sobic003G366600 Sobic002G233100--Sobic003G366600 Sobic003G184100 Sobic003G184100 Sobic002G233100--Sobic003G184100 Sobic002G312900 Sobic002G312900 Sobic002G233100--Sobic002G312900 Sobic005G043000 Sobic005G043000 Sobic002G233100--Sobic005G043000 Sobic002G196100 Sobic002G196100 Sobic002G233100--Sobic002G196100 Sobic003G404600 Sobic003G404600 Sobic002G233100--Sobic003G404600 Sobic007G161400 Sobic007G161400 Sobic002G233100--Sobic007G161400 Sobic006G059700 Sobic006G059700 Sobic002G233100--Sobic006G059700 Sobic004G001000--Sobic002G233100 Sobic004G001000--Sobic005G043000 Sobic008G128900 Sobic008G128900 Sobic004G001000--Sobic008G128900 Sobic004G001000--Sobic002G312900 Sobic006G125100 Sobic006G125100 Sobic004G001000--Sobic006G125100 Sobic010G151200 Sobic010G151200 Sobic004G001000--Sobic010G151200 Sobic002G320800 Sobic002G320800 Sobic004G001000--Sobic002G320800 Sobic004G001000--Sobic007G161400 Sobic010G110800 Sobic010G110800 Sobic004G001000--Sobic010G110800 Sobic004G348400 Sobic004G348400 Sobic003G366600--Sobic004G348400 Sobic006G044100 Sobic006G044100 Sobic003G366600--Sobic006G044100 Sobic006G157900 Sobic006G157900 Sobic003G366600--Sobic006G157900 Sobic010G185000 Sobic010G185000 Sobic003G366600--Sobic010G185000 Sobic003G366600--Sobic003G404600 Sobic001G481400 Sobic001G481400 Sobic003G366600--Sobic001G481400 Sobic001G403000 Sobic001G403000 Sobic003G366600--Sobic001G403000 Sobic009G072900 Sobic009G072900 Sobic003G366600--Sobic009G072900 Sobic003G366600--Sobic006G059700 Sobic003G157600 Sobic003G157600 Sobic003G184100--Sobic003G157600 Sobic004G202400 Sobic004G202400 Sobic003G184100--Sobic004G202400 Sobic003G184100--Sobic006G044100 Sobic006G197100 Sobic006G197100 Sobic003G184100--Sobic006G197100 Sobic001G416200 Sobic001G416200 Sobic003G184100--Sobic001G416200 Sobic004G046200 Sobic004G046200 Sobic003G184100--Sobic004G046200 Sobic004G042000 Sobic004G042000 Sobic003G184100--Sobic004G042000 Sobic004G349125 Sobic004G349125 Sobic003G184100--Sobic004G349125 Sobic003G184100--Sobic001G481400 Sobic004G176600 Sobic004G176600 Sobic002G312900--Sobic004G176600 Sobic002G312900--Sobic008G128900 Sobic010G195500 Sobic010G195500 Sobic002G312900--Sobic010G195500 Sobic002G312900--Sobic005G043000 Sobic003G416300 Sobic003G416300 Sobic002G312900--Sobic003G416300 Sobic002G312900--Sobic006G059700 Sobic002G312900--Sobic003G366600 Sobic001G147900 Sobic001G147900 Sobic002G312900--Sobic001G147900 Sobic005G084600 Sobic005G084600 Sobic002G312900--Sobic005G084600 Sobic005G043000--Sobic002G312900 Sobic010G272300 Sobic010G272300 Sobic005G043000--Sobic010G272300 Sobic005G043000--Sobic006G059700 Sobic005G043000--Sobic007G161400 Sobic005G043000--Sobic002G196100 Sobic005G043000--Sobic001G147900 Sobic001G082600 Sobic001G082600 Sobic005G043000--Sobic001G082600 Sobic005G043000--Sobic008G128900 Sobic005G043000--Sobic003G366600 Sobic002G196100--Sobic005G043000 Sobic002G196100--Sobic010G272300 Sobic002G196100--Sobic002G233100 Sobic002G196100--Sobic003G366600 Sobic002G196100--Sobic010G110800 Sobic002G196100--Sobic004G176600 Sobic002G310600 Sobic002G310600 Sobic002G196100--Sobic002G310600 Sobic002G196100--Sobic009G072900 Sobic002G196100--Sobic005G084600 Sobic003G404600--Sobic006G059700 Sobic003G404600--Sobic003G366600 Sobic003G404600--Sobic001G147900 Sobic003G404600--Sobic010G185000 Sobic003G404600--Sobic006G197100 Sobic004G227800 Sobic004G227800 Sobic003G404600--Sobic004G227800 Sobic004G024100 Sobic004G024100 Sobic003G404600--Sobic004G024100 Sobic003G404600--Sobic004G348400 Sobic003G404600--Sobic004G349125 Sobic003G280400 Sobic003G280400 Sobic007G161400--Sobic003G280400 Sobic007G161400--Sobic008G128900 Sobic007G161400--Sobic006G059700 Sobic007G161400--Sobic004G042000 Sobic007G161400--Sobic005G043000 Sobic007G078100 Sobic007G078100 Sobic007G161400--Sobic007G078100 Sobic007G161400--Sobic002G312900 Sobic003G363800 Sobic003G363800 Sobic007G161400--Sobic003G363800 Sobic004G051700 Sobic004G051700 Sobic007G161400--Sobic004G051700 Sobic006G059700--Sobic003G404600 Sobic004G262200 Sobic004G262200 Sobic006G059700--Sobic004G262200 Sobic006G059700--Sobic003G280400 Sobic006G059700--Sobic010G272300 Sobic010G001000 Sobic010G001000 Sobic006G059700--Sobic010G001000 Sobic006G059700--Sobic003G366600 Sobic006G059700--Sobic001G147900 Sobic006G059700--Sobic006G125100 Sobic006G059700--Sobic002G312900
Octagon: transcription factors


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