Gene annotation
Transcriptome id Sobic.009G130100.1
Synonym ATHCHIB, PR3, B-CHI, HCHIB, PR-3, CHI-B, Sb09g019660
Functional annotation CHIT17 - Chitinase family protein precursor, expressed
UniProt A0A1Z5R3E0
Pfam PF00187 PF00182
Panther DB PTHR22595 PTHR22595:SF53
NCBI CDD KOG4742; Predicted chitinase
KEGG Orthology K01183; chitinase
Gene Ontology GO:0008061; chitin binding GO:0016998cell wall macromolecule catabolic process GO:0006032chitin catabolic process GO:0004568chitinase activity


Orthologs (automatic annotation)
TAIR AT3G12500 : basic chitinase
RAP-DB (Rice) LOC_Os05g33130.1 : CHIT17 - Chitinase family protein precursor, expressed
MaizeGDB (Corn) Zm00025a041699 , Zm00025a037031 , Zm00025a038131
Brachypodium KQK06372 , KQK09291 , KQK07647 , PNT71299 , KQJ97632
Barley HORVU7Hr1G113270.1 , HORVU7Hr1G113270.3 , HORVU7Hr1G113270.2 , HORVU7Hr1G113270.5 , HORVU7Hr1G113270.4 , HORVU7Hr1G113270.6 , HORVU7Hr1G113270.9 , HORVU7Hr1G113270.8 , HORVU7Hr1G113270.10 , HORVU3Hr1G064470.2 , HORVU3Hr1G064470.3 , HORVU3Hr1G064470.1 , HORVU7Hr1G121850.1 , HORVU7Hr1G121850.2 , HORVU7Hr1G121850.3 , HORVU7Hr1G121850.4 , HORVU7Hr1G121850.5 , HORVU1Hr1G062030.1
Wheat TraesCS3B02G293400 , TraesCS5B02G403700 , TraesCSU02G020700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G262500 lectin-like protein kinase, putative, expressed -
2 Sobic.003G366600 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
3 Sobic.003G404600 regulatory protein, putative, expressed -
4 Sobic.003G228200 cytochrome P450 72A1, putative, expressed -
5 Sobic.003G280400 hexokinase, putative, expressed K00844: hexokinase
6 Sobic.006G059700 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
7 Sobic.006G197100 DNA binding protein, putative, expressed -
8 Sobic.010G001000 expressed protein -
9 Sobic.004G349125 - -
10 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
11 Sobic.010G195500 reductase, putative, expressed -
12 Sobic.008G128900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
13 Sobic.004G262200 DNA binding protein, putative, expressed -
14 Sobic.002G312900 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
15 Sobic.003G079400 Ser/Thr protein kinase, putative, expressed -
16 Sobic.003G343900 expressed protein -
17 Sobic.003G417100 esterase, putative, expressed -
18 Sobic.003G416300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.006G274933 - -
20 Sobic.005G168800 DJ-1 family protein, putative, expressed K18881: D-lactate dehydratase


Gene co-expression network
sample Sobic009G130100 Sobic009G130100 Sobic004G262500 Sobic004G262500 Sobic009G130100--Sobic004G262500 Sobic003G366600 Sobic003G366600 Sobic009G130100--Sobic003G366600 Sobic003G404600 Sobic003G404600 Sobic009G130100--Sobic003G404600 Sobic003G228200 Sobic003G228200 Sobic009G130100--Sobic003G228200 Sobic003G280400 Sobic003G280400 Sobic009G130100--Sobic003G280400 Sobic006G059700 Sobic006G059700 Sobic009G130100--Sobic006G059700 Sobic006G197100 Sobic006G197100 Sobic009G130100--Sobic006G197100 Sobic010G001000 Sobic010G001000 Sobic009G130100--Sobic010G001000 Sobic004G349125 Sobic004G349125 Sobic009G130100--Sobic004G349125 Sobic004G262500--Sobic009G130100 Sobic006G274933 Sobic006G274933 Sobic004G262500--Sobic006G274933 Sobic004G262500--Sobic003G404600 Sobic003G417100 Sobic003G417100 Sobic004G262500--Sobic003G417100 Sobic006G256900 Sobic006G256900 Sobic004G262500--Sobic006G256900 Sobic009G219200 Sobic009G219200 Sobic004G262500--Sobic009G219200 Sobic004G024100 Sobic004G024100 Sobic004G262500--Sobic004G024100 Sobic004G042000 Sobic004G042000 Sobic004G262500--Sobic004G042000 Sobic004G262500--Sobic006G197100 Sobic004G348400 Sobic004G348400 Sobic003G366600--Sobic004G348400 Sobic006G044100 Sobic006G044100 Sobic003G366600--Sobic006G044100 Sobic006G157900 Sobic006G157900 Sobic003G366600--Sobic006G157900 Sobic010G185000 Sobic010G185000 Sobic003G366600--Sobic010G185000 Sobic003G366600--Sobic003G404600 Sobic001G481400 Sobic001G481400 Sobic003G366600--Sobic001G481400 Sobic001G403000 Sobic001G403000 Sobic003G366600--Sobic001G403000 Sobic009G072900 Sobic009G072900 Sobic003G366600--Sobic009G072900 Sobic003G366600--Sobic006G059700 Sobic003G404600--Sobic006G059700 Sobic003G404600--Sobic003G366600 Sobic001G147900 Sobic001G147900 Sobic003G404600--Sobic001G147900 Sobic003G404600--Sobic010G185000 Sobic003G404600--Sobic006G197100 Sobic004G227800 Sobic004G227800 Sobic003G404600--Sobic004G227800 Sobic003G404600--Sobic004G024100 Sobic003G404600--Sobic004G348400 Sobic003G404600--Sobic004G349125 Sobic002G327300 Sobic002G327300 Sobic003G228200--Sobic002G327300 Sobic003G264600 Sobic003G264600 Sobic003G228200--Sobic003G264600 Sobic001G318500 Sobic001G318500 Sobic003G228200--Sobic001G318500 Sobic002G327100 Sobic002G327100 Sobic003G228200--Sobic002G327100 Sobic003G037500 Sobic003G037500 Sobic003G228200--Sobic003G037500 Sobic006G158400 Sobic006G158400 Sobic003G228200--Sobic006G158400 Sobic004G245100 Sobic004G245100 Sobic003G228200--Sobic004G245100 Sobic003G192100 Sobic003G192100 Sobic003G228200--Sobic003G192100 Sobic010G270500 Sobic010G270500 Sobic003G228200--Sobic010G270500 Sobic007G161400 Sobic007G161400 Sobic003G280400--Sobic007G161400 Sobic003G280400--Sobic006G059700 Sobic010G110800 Sobic010G110800 Sobic003G280400--Sobic010G110800 Sobic007G204700 Sobic007G204700 Sobic003G280400--Sobic007G204700 Sobic010G272300 Sobic010G272300 Sobic003G280400--Sobic010G272300 Sobic001G264000 Sobic001G264000 Sobic003G280400--Sobic001G264000 Sobic005G065900 Sobic005G065900 Sobic003G280400--Sobic005G065900 Sobic003G280400--Sobic006G197100 Sobic003G280400--Sobic006G256900 Sobic006G059700--Sobic003G404600 Sobic004G262200 Sobic004G262200 Sobic006G059700--Sobic004G262200 Sobic006G059700--Sobic003G280400 Sobic006G059700--Sobic010G272300 Sobic006G059700--Sobic010G001000 Sobic006G059700--Sobic003G366600 Sobic006G059700--Sobic001G147900 Sobic006G125100 Sobic006G125100 Sobic006G059700--Sobic006G125100 Sobic002G312900 Sobic002G312900 Sobic006G059700--Sobic002G312900 Sobic002G003800 Sobic002G003800 Sobic006G197100--Sobic002G003800 Sobic006G197100--Sobic004G042000 Sobic006G197100--Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic006G197100--Sobic001G416200 Sobic004G202400 Sobic004G202400 Sobic006G197100--Sobic004G202400 Sobic006G197100--Sobic001G264000 Sobic003G311800 Sobic003G311800 Sobic006G197100--Sobic003G311800 Sobic002G042200 Sobic002G042200 Sobic006G197100--Sobic002G042200 Sobic003G368600 Sobic003G368600 Sobic006G197100--Sobic003G368600 Sobic010G001000--Sobic004G042000 Sobic010G001000--Sobic006G157900 Sobic010G063000 Sobic010G063000 Sobic010G001000--Sobic010G063000 Sobic001G302600 Sobic001G302600 Sobic010G001000--Sobic001G302600 Sobic001G500000 Sobic001G500000 Sobic010G001000--Sobic001G500000 Sobic010G001000--Sobic010G185000 Sobic006G103000 Sobic006G103000 Sobic010G001000--Sobic006G103000 Sobic010G001000--Sobic001G318500 Sobic010G001000--Sobic006G059700 Sobic004G349125--Sobic001G416200 Sobic004G349125--Sobic006G197100 Sobic004G349125--Sobic001G302600 Sobic001G161500 Sobic001G161500 Sobic004G349125--Sobic001G161500 Sobic004G349125--Sobic004G042000 Sobic003G228600 Sobic003G228600 Sobic004G349125--Sobic003G228600 Sobic004G349125--Sobic002G003800 Sobic004G349125--Sobic004G202400 Sobic004G349125--Sobic003G311800
Octagon: transcription factors


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