Gene annotation
Transcriptome id Sobic.001G403000.1
Synonym Sb01g038120
Functional annotation expressed protein
UniProt C5WNF7
Pfam PF14009
Panther DB PTHR33052 PTHR33052:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30230 : -
RAP-DB (Rice) LOC_Os03g18660.1 : expressed protein
MaizeGDB (Corn) Zm00025a002045 , Zm00025a023332
Brachypodium KQK22085
Barley HORVU4Hr1G055090.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G487300 expressed protein -
2 Sobic.009G072900 calmodulin-binding protein, putative, expressed -
3 Sobic.008G063400 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.003G437200 sulfotransferase domain containing protein, expressed -
5 Sobic.005G206601 - -
6 Sobic.009G240600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase, putative, expressed -
7 Sobic.002G375400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
8 Sobic.003G417800 down-regulated TF in developmental senescence(PubMedID : 27586543)@histone-like transcription factor and archaeal histone, putative, expressed -
9 Sobic.010G185000 VQ domain containing protein, putative, expressed -
10 Sobic.003G366600 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
11 Sobic.004G176600 no apical meristem protein, putative, expressed -
12 Sobic.001G481400 similar to AP2 domain containing protein(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@similar to AP2 domain containing protein(PubMedID : 24655390)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
13 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
14 Sobic.010G084300 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
15 Sobic.006G044100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.001G476500 helix-loop-helix DNA-binding protein, putative, expressed -
17 Sobic.004G348400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
18 Sobic.002G210401 - -
19 Sobic.006G277600 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.005G084600 ARGOS, putative, expressed -


Gene co-expression network
sample Sobic001G403000 Sobic001G403000 Sobic001G487300 Sobic001G487300 Sobic001G403000--Sobic001G487300 Sobic009G072900 Sobic009G072900 Sobic001G403000--Sobic009G072900 Sobic008G063400 Sobic008G063400 Sobic001G403000--Sobic008G063400 Sobic003G437200 Sobic003G437200 Sobic001G403000--Sobic003G437200 Sobic005G206601 Sobic005G206601 Sobic001G403000--Sobic005G206601 Sobic009G240600 Sobic009G240600 Sobic001G403000--Sobic009G240600 Sobic002G375400 Sobic002G375400 Sobic001G403000--Sobic002G375400 Sobic003G417800 Sobic003G417800 Sobic001G403000--Sobic003G417800 Sobic010G185000 Sobic010G185000 Sobic001G403000--Sobic010G185000 Sobic001G487300--Sobic001G403000 Sobic004G221500 Sobic004G221500 Sobic001G487300--Sobic004G221500 Sobic006G084600 Sobic006G084600 Sobic001G487300--Sobic006G084600 Sobic001G487300--Sobic009G240600 Sobic010G084700 Sobic010G084700 Sobic001G487300--Sobic010G084700 Sobic001G348700 Sobic001G348700 Sobic001G487300--Sobic001G348700 Sobic001G487300--Sobic005G206601 Sobic004G071650 Sobic004G071650 Sobic001G487300--Sobic004G071650 Sobic001G476500 Sobic001G476500 Sobic001G487300--Sobic001G476500 Sobic009G072900--Sobic001G403000 Sobic009G072900--Sobic002G375400 Sobic009G072900--Sobic010G185000 Sobic009G072900--Sobic005G206601 Sobic004G348400 Sobic004G348400 Sobic009G072900--Sobic004G348400 Sobic006G243600 Sobic006G243600 Sobic009G072900--Sobic006G243600 Sobic003G366600 Sobic003G366600 Sobic009G072900--Sobic003G366600 Sobic009G072900--Sobic009G240600 Sobic003G430600 Sobic003G430600 Sobic009G072900--Sobic003G430600 Sobic008G063400--Sobic001G403000 Sobic002G210401 Sobic002G210401 Sobic008G063400--Sobic002G210401 Sobic006G277600 Sobic006G277600 Sobic008G063400--Sobic006G277600 Sobic003G264400 Sobic003G264400 Sobic008G063400--Sobic003G264400 Sobic008G063400--Sobic005G206601 Sobic008G063400--Sobic003G437200 Sobic008G063400--Sobic006G084600 Sobic010G084300 Sobic010G084300 Sobic008G063400--Sobic010G084300 Sobic006G044100 Sobic006G044100 Sobic008G063400--Sobic006G044100 Sobic004G107700 Sobic004G107700 Sobic003G437200--Sobic004G107700 Sobic003G437200--Sobic003G417800 Sobic003G437200--Sobic006G084600 Sobic003G062600 Sobic003G062600 Sobic003G437200--Sobic003G062600 Sobic003G437200--Sobic001G403000 Sobic007G155100 Sobic007G155100 Sobic003G437200--Sobic007G155100 Sobic001G119400 Sobic001G119400 Sobic003G437200--Sobic001G119400 Sobic004G176600 Sobic004G176600 Sobic003G437200--Sobic004G176600 Sobic003G437200--Sobic002G375400 Sobic007G227300 Sobic007G227300 Sobic005G206601--Sobic007G227300 Sobic003G252800 Sobic003G252800 Sobic005G206601--Sobic003G252800 Sobic003G117600 Sobic003G117600 Sobic005G206601--Sobic003G117600 Sobic006G099900 Sobic006G099900 Sobic005G206601--Sobic006G099900 Sobic005G206601--Sobic006G277600 Sobic005G206601--Sobic001G348700 Sobic005G206601--Sobic009G240600 Sobic005G206601--Sobic010G084700 Sobic001G400800 Sobic001G400800 Sobic005G206601--Sobic001G400800 Sobic001G481400 Sobic001G481400 Sobic009G240600--Sobic001G481400 Sobic009G240600--Sobic007G227300 Sobic001G231700 Sobic001G231700 Sobic009G240600--Sobic001G231700 Sobic006G103000 Sobic006G103000 Sobic009G240600--Sobic006G103000 Sobic001G500000 Sobic001G500000 Sobic009G240600--Sobic001G500000 Sobic002G287100 Sobic002G287100 Sobic009G240600--Sobic002G287100 Sobic009G240600--Sobic001G476500 Sobic009G240600--Sobic003G417800 Sobic001G192200 Sobic001G192200 Sobic009G240600--Sobic001G192200 Sobic002G375400--Sobic004G176600 Sobic002G375400--Sobic004G107700 Sobic002G375400--Sobic010G185000 Sobic002G375400--Sobic005G206601 Sobic002G375400--Sobic003G437200 Sobic002G375400--Sobic009G072900 Sobic002G375400--Sobic003G417800 Sobic002G375400--Sobic001G403000 Sobic002G375400--Sobic004G348400 Sobic003G417800--Sobic001G476500 Sobic003G417800--Sobic003G437200 Sobic009G183400 Sobic009G183400 Sobic003G417800--Sobic009G183400 Sobic003G417800--Sobic003G062600 Sobic003G417800--Sobic001G119400 Sobic003G417800--Sobic004G107700 Sobic003G417800--Sobic006G099900 Sobic003G352300 Sobic003G352300 Sobic003G417800--Sobic003G352300 Sobic003G417800--Sobic009G240600 Sobic002G247600 Sobic002G247600 Sobic010G185000--Sobic002G247600 Sobic005G018700 Sobic005G018700 Sobic010G185000--Sobic005G018700 Sobic010G185000--Sobic007G227300 Sobic010G185000--Sobic009G240600 Sobic010G185000--Sobic004G348400 Sobic010G185000--Sobic002G375400 Sobic010G185000--Sobic001G481400 Sobic010G185000--Sobic005G206601 Sobic007G151300 Sobic007G151300 Sobic010G185000--Sobic007G151300
Octagon: transcription factors


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