Gene annotation
Transcriptome id Sobic.002G210901.1
Synonym -
Functional annotation -
UniProt A0A1W0W569
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g23440.1 : hypothetical protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G049300 expressed protein -
2 Sobic.009G155200 ZOS5-08 - C2H2 zinc finger protein, expressed -
3 Sobic.007G025700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid transporter, putative, expressed -
4 Sobic.001G054400 expressed protein -
5 Sobic.009G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
6 Sobic.008G111100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
7 Sobic.007G171000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
8 Sobic.002G224100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
9 Sobic.004G307000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
10 Sobic.001G119000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.004G158901 - -
12 Sobic.010G224200 MYB family transcription factor, putative, expressed -
13 Sobic.003G423500 SbGlu1 promoter sequences(-2000 bp to -1 bp) bound and upregulated by SbSTOP1(PubMedID : 30387379)@"beta-1,3-glucanase, localized throuout cytoplasm and nuclei with no specific subcellular localization"(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
14 Sobic.003G167500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
15 Sobic.004G195300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.002G222800 galactosyltransferase, putative, expressed -
17 Sobic.009G149400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
18 Sobic.001G196300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
19 Sobic.002G153500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
20 Sobic.010G069200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like


Gene co-expression network
sample Sobic002G210901 Sobic002G210901 Sobic003G049300 Sobic003G049300 Sobic002G210901--Sobic003G049300 Sobic009G155200 Sobic009G155200 Sobic002G210901--Sobic009G155200 Sobic007G025700 Sobic007G025700 Sobic002G210901--Sobic007G025700 Sobic001G054400 Sobic001G054400 Sobic002G210901--Sobic001G054400 Sobic009G177800 Sobic009G177800 Sobic002G210901--Sobic009G177800 Sobic008G111100 Sobic008G111100 Sobic002G210901--Sobic008G111100 Sobic007G171000 Sobic007G171000 Sobic002G210901--Sobic007G171000 Sobic002G224100 Sobic002G224100 Sobic002G210901--Sobic002G224100 Sobic004G307000 Sobic004G307000 Sobic002G210901--Sobic004G307000 Sobic002G242500 Sobic002G242500 Sobic003G049300--Sobic002G242500 Sobic004G145200 Sobic004G145200 Sobic003G049300--Sobic004G145200 Sobic010G225100 Sobic010G225100 Sobic003G049300--Sobic010G225100 Sobic006G076201 Sobic006G076201 Sobic003G049300--Sobic006G076201 Sobic003G049300--Sobic002G210901 Sobic009G149400 Sobic009G149400 Sobic003G049300--Sobic009G149400 Sobic010G228000 Sobic010G228000 Sobic003G049300--Sobic010G228000 Sobic003G049300--Sobic009G155200 Sobic010G236500 Sobic010G236500 Sobic003G049300--Sobic010G236500 Sobic009G155200--Sobic007G171000 Sobic001G119000 Sobic001G119000 Sobic009G155200--Sobic001G119000 Sobic009G155200--Sobic001G054400 Sobic002G359300 Sobic002G359300 Sobic009G155200--Sobic002G359300 Sobic009G155200--Sobic008G111100 Sobic009G155200--Sobic009G177800 Sobic005G103300 Sobic005G103300 Sobic009G155200--Sobic005G103300 Sobic009G036700 Sobic009G036700 Sobic009G155200--Sobic009G036700 Sobic001G040200 Sobic001G040200 Sobic009G155200--Sobic001G040200 Sobic004G304400 Sobic004G304400 Sobic007G025700--Sobic004G304400 Sobic007G025700--Sobic002G224100 Sobic007G025700--Sobic004G307000 Sobic007G025700--Sobic008G111100 Sobic003G189200 Sobic003G189200 Sobic007G025700--Sobic003G189200 Sobic005G117400 Sobic005G117400 Sobic007G025700--Sobic005G117400 Sobic007G025700--Sobic009G177800 Sobic004G158901 Sobic004G158901 Sobic007G025700--Sobic004G158901 Sobic001G474200 Sobic001G474200 Sobic007G025700--Sobic001G474200 Sobic001G054400--Sobic009G155200 Sobic001G054400--Sobic001G119000 Sobic003G423500 Sobic003G423500 Sobic001G054400--Sobic003G423500 Sobic004G195300 Sobic004G195300 Sobic001G054400--Sobic004G195300 Sobic001G054400--Sobic009G177800 Sobic001G054400--Sobic007G171000 Sobic001G054400--Sobic002G359300 Sobic003G035700 Sobic003G035700 Sobic001G054400--Sobic003G035700 Sobic001G119100 Sobic001G119100 Sobic001G054400--Sobic001G119100 Sobic002G183200 Sobic002G183200 Sobic009G177800--Sobic002G183200 Sobic009G177800--Sobic004G307000 Sobic009G177800--Sobic008G111100 Sobic009G177800--Sobic001G119100 Sobic002G195900 Sobic002G195900 Sobic009G177800--Sobic002G195900 Sobic009G177800--Sobic001G119000 Sobic006G173900 Sobic006G173900 Sobic009G177800--Sobic006G173900 Sobic004G167800 Sobic004G167800 Sobic009G177800--Sobic004G167800 Sobic009G177800--Sobic007G171000 Sobic008G111100--Sobic009G177800 Sobic003G429300 Sobic003G429300 Sobic008G111100--Sobic003G429300 Sobic008G111100--Sobic004G307000 Sobic003G019200 Sobic003G019200 Sobic008G111100--Sobic003G019200 Sobic008G111100--Sobic009G155200 Sobic008G111100--Sobic007G171000 Sobic008G111100--Sobic002G195900 Sobic010G224200 Sobic010G224200 Sobic008G111100--Sobic010G224200 Sobic002G423300 Sobic002G423300 Sobic008G111100--Sobic002G423300 Sobic007G171000--Sobic009G155200 Sobic007G171000--Sobic002G195900 Sobic007G171000--Sobic003G429300 Sobic007G171000--Sobic001G119000 Sobic007G171000--Sobic009G177800 Sobic007G171000--Sobic002G359300 Sobic002G046100 Sobic002G046100 Sobic007G171000--Sobic002G046100 Sobic007G171000--Sobic008G111100 Sobic007G137700 Sobic007G137700 Sobic007G171000--Sobic007G137700 Sobic002G224100--Sobic004G158901 Sobic002G224100--Sobic003G429300 Sobic002G224100--Sobic007G025700 Sobic002G224100--Sobic004G307000 Sobic002G224100--Sobic003G189200 Sobic002G224100--Sobic005G117400 Sobic002G379866 Sobic002G379866 Sobic002G224100--Sobic002G379866 Sobic002G224100--Sobic007G171000 Sobic002G224100--Sobic008G111100 Sobic004G307000--Sobic009G177800 Sobic003G322900 Sobic003G322900 Sobic004G307000--Sobic003G322900 Sobic004G307000--Sobic007G137700 Sobic004G307000--Sobic008G111100 Sobic004G307000--Sobic002G195900 Sobic002G055600 Sobic002G055600 Sobic004G307000--Sobic002G055600 Sobic004G050000 Sobic004G050000 Sobic004G307000--Sobic004G050000 Sobic004G307000--Sobic002G423300 Sobic002G117100 Sobic002G117100 Sobic004G307000--Sobic002G117100
Octagon: transcription factors


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