Gene annotation
Transcriptome id Sobic.010G069200.1
Synonym Sb10g006030
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
cyclin-dependent kinase G-2, putative, expressed
UniProt A0A194YHS0
Pfam PF07714
Panther DB PTHR24056 PTHR24056:SF183
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily KOG0663Protein kinase PITSLRE and related kinases
KEGG Orthology K08818; cell division cycle 2-like
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G67580 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os10g06510.1 : cyclin-dependent kinase G-1, putative, expressed
MaizeGDB (Corn) Zm00025a049722 , Zm00025a049721
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G224200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
2 Sobic.006G121500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytochrome P450, putative, expressed -
3 Sobic.003G423500 SbGlu1 promoter sequences(-2000 bp to -1 bp) bound and upregulated by SbSTOP1(PubMedID : 30387379)@"beta-1,3-glucanase, localized throuout cytoplasm and nuclei with no specific subcellular localization"(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
4 Sobic.007G171000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
5 Sobic.004G050000 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
6 Sobic.003G322900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.004G307000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
8 Sobic.002G055600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
9 Sobic.007G137700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
10 Sobic.001G119000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.009G009600 expressed protein -
12 Sobic.001G187200 expressed protein -
13 Sobic.002G183200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
14 Sobic.009G155200 ZOS5-08 - C2H2 zinc finger protein, expressed -
15 Sobic.004G189500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.002G004900 transporter family protein, putative, expressed -
17 Sobic.009G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
18 Sobic.007G061300 - -
19 Sobic.009G043600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.004G313100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase


Gene co-expression network
sample Sobic010G069200 Sobic010G069200 Sobic006G224200 Sobic006G224200 Sobic010G069200--Sobic006G224200 Sobic006G121500 Sobic006G121500 Sobic010G069200--Sobic006G121500 Sobic003G423500 Sobic003G423500 Sobic010G069200--Sobic003G423500 Sobic007G171000 Sobic007G171000 Sobic010G069200--Sobic007G171000 Sobic004G050000 Sobic004G050000 Sobic010G069200--Sobic004G050000 Sobic003G322900 Sobic003G322900 Sobic010G069200--Sobic003G322900 Sobic004G307000 Sobic004G307000 Sobic010G069200--Sobic004G307000 Sobic002G055600 Sobic002G055600 Sobic010G069200--Sobic002G055600 Sobic007G137700 Sobic007G137700 Sobic010G069200--Sobic007G137700 Sobic006G224200--Sobic010G069200 Sobic006G224200--Sobic006G121500 Sobic006G214600 Sobic006G214600 Sobic006G224200--Sobic006G214600 Sobic002G139300 Sobic002G139300 Sobic006G224200--Sobic002G139300 Sobic006G240600 Sobic006G240600 Sobic006G224200--Sobic006G240600 Sobic010G211600 Sobic010G211600 Sobic006G224200--Sobic010G211600 Sobic008G158100 Sobic008G158100 Sobic006G224200--Sobic008G158100 Sobic008G027600 Sobic008G027600 Sobic006G224200--Sobic008G027600 Sobic006G224200--Sobic003G322900 Sobic001G401100 Sobic001G401100 Sobic006G121500--Sobic001G401100 Sobic006G121500--Sobic002G055600 Sobic004G148200 Sobic004G148200 Sobic006G121500--Sobic004G148200 Sobic002G367400 Sobic002G367400 Sobic006G121500--Sobic002G367400 Sobic002G055700 Sobic002G055700 Sobic006G121500--Sobic002G055700 Sobic006G121500--Sobic010G069200 Sobic004G189500 Sobic004G189500 Sobic006G121500--Sobic004G189500 Sobic006G121500--Sobic004G050000 Sobic006G121500--Sobic006G240600 Sobic003G035700 Sobic003G035700 Sobic003G423500--Sobic003G035700 Sobic003G423500--Sobic010G069200 Sobic001G119000 Sobic001G119000 Sobic003G423500--Sobic001G119000 Sobic001G054400 Sobic001G054400 Sobic003G423500--Sobic001G054400 Sobic003G423500--Sobic007G171000 Sobic010G078600 Sobic010G078600 Sobic003G423500--Sobic010G078600 Sobic004G195300 Sobic004G195300 Sobic003G423500--Sobic004G195300 Sobic004G147900 Sobic004G147900 Sobic003G423500--Sobic004G147900 Sobic009G155200 Sobic009G155200 Sobic003G423500--Sobic009G155200 Sobic007G171000--Sobic009G155200 Sobic002G195900 Sobic002G195900 Sobic007G171000--Sobic002G195900 Sobic003G429300 Sobic003G429300 Sobic007G171000--Sobic003G429300 Sobic007G171000--Sobic001G119000 Sobic009G177800 Sobic009G177800 Sobic007G171000--Sobic009G177800 Sobic002G359300 Sobic002G359300 Sobic007G171000--Sobic002G359300 Sobic002G046100 Sobic002G046100 Sobic007G171000--Sobic002G046100 Sobic008G111100 Sobic008G111100 Sobic007G171000--Sobic008G111100 Sobic007G171000--Sobic007G137700 Sobic009G043600 Sobic009G043600 Sobic004G050000--Sobic009G043600 Sobic001G066000 Sobic001G066000 Sobic004G050000--Sobic001G066000 Sobic004G049900 Sobic004G049900 Sobic004G050000--Sobic004G049900 Sobic004G277000 Sobic004G277000 Sobic004G050000--Sobic004G277000 Sobic002G267500 Sobic002G267500 Sobic004G050000--Sobic002G267500 Sobic004G050000--Sobic006G121500 Sobic002G090200 Sobic002G090200 Sobic004G050000--Sobic002G090200 Sobic004G050000--Sobic009G177800 Sobic006G108400 Sobic006G108400 Sobic004G050000--Sobic006G108400 Sobic002G263400 Sobic002G263400 Sobic003G322900--Sobic002G263400 Sobic004G189400 Sobic004G189400 Sobic003G322900--Sobic004G189400 Sobic002G183200 Sobic002G183200 Sobic003G322900--Sobic002G183200 Sobic004G148000 Sobic004G148000 Sobic003G322900--Sobic004G148000 Sobic003G382600 Sobic003G382600 Sobic003G322900--Sobic003G382600 Sobic005G091500 Sobic005G091500 Sobic003G322900--Sobic005G091500 Sobic002G140400 Sobic002G140400 Sobic003G322900--Sobic002G140400 Sobic007G155100 Sobic007G155100 Sobic003G322900--Sobic007G155100 Sobic003G307801 Sobic003G307801 Sobic003G322900--Sobic003G307801 Sobic004G307000--Sobic009G177800 Sobic004G307000--Sobic003G322900 Sobic004G307000--Sobic007G137700 Sobic004G307000--Sobic008G111100 Sobic004G307000--Sobic002G195900 Sobic004G307000--Sobic002G055600 Sobic004G307000--Sobic004G050000 Sobic002G423300 Sobic002G423300 Sobic004G307000--Sobic002G423300 Sobic002G117100 Sobic002G117100 Sobic004G307000--Sobic002G117100 Sobic004G237800 Sobic004G237800 Sobic002G055600--Sobic004G237800 Sobic002G055600--Sobic005G091500 Sobic008G136400 Sobic008G136400 Sobic002G055600--Sobic008G136400 Sobic004G321300 Sobic004G321300 Sobic002G055600--Sobic004G321300 Sobic002G055600--Sobic004G189400 Sobic002G055600--Sobic002G055700 Sobic003G334600 Sobic003G334600 Sobic002G055600--Sobic003G334600 Sobic002G055600--Sobic002G183200 Sobic002G055600--Sobic004G189500 Sobic007G137700--Sobic004G307000 Sobic007G137700--Sobic007G171000 Sobic007G137700--Sobic002G055600 Sobic007G137700--Sobic002G195900 Sobic002G356101 Sobic002G356101 Sobic007G137700--Sobic002G356101 Sobic007G137700--Sobic002G423300 Sobic003G019200 Sobic003G019200 Sobic007G137700--Sobic003G019200 Sobic007G137700--Sobic004G050000 Sobic001G399100 Sobic001G399100 Sobic007G137700--Sobic001G399100
Octagon: transcription factors


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