Gene annotation
Transcriptome id Sobic.003G423500.1
Synonym beta-1, 3-glucanase , SbGlu1;SbGlu1, Sb03g045630
Functional annotation SbGlu1 promoter sequences(-2000 bp to -1 bp) bound and upregulated by SbSTOP1 (PubMedID : 30387379)
"beta-1,3-glucanase, localized throuout cytoplasm and nuclei with no specific subcellular localization" (PubMedID : 25311645)
glycosyl hydrolases family 17, putative, expressed
UniProt C5XHT5
Pfam PF00332
Panther DB PTHR32227 PTHR32227:SF86
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G16260 : Glycosyl hydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g71820.1 : glycosyl hydrolases family 17, putative, expressed
MaizeGDB (Corn) Zm00025a034730 , Zm00025a026066 , Zm00025a052795
Brachypodium KQK11472 , KQK11473 , KQK08651 , KQK11471 , KQK11483 , KQK11495 , KQK05606
Barley HORVU3Hr1G105300.2 , HORVU3Hr1G105300.1 , HORVU3Hr1G105400.3 , HORVU3Hr1G105400.2 , HORVU1Hr1G067460.6 , HORVU1Hr1G067460.4 , HORVU1Hr1G067460.5 , HORVU1Hr1G067460.2 , HORVU1Hr1G067460.3 , HORVU1Hr1G067460.1 , HORVU3Hr1G105790.9 , HORVU3Hr1G105790.6 , HORVU7Hr1G051320.2 , HORVU7Hr1G051320.3 , HORVU7Hr1G051320.1 , HORVU7Hr1G051320.4 , HORVU3Hr1G105190.7 , HORVU3Hr1G105190.6 , HORVU3Hr1G105190.5 , HORVU3Hr1G105190.4 , HORVU3Hr1G105190.3 , HORVU3Hr1G105190.2 , HORVU3Hr1G105190.9 , HORVU3Hr1G105820.2 , HORVU3Hr1G105820.1 , HORVU7Hr1G051310.3 , HORVU3Hr1G105790.10 , HORVU3Hr1G073150.1 , HORVU3Hr1G073150.2 , HORVU3Hr1G105400.1 , HORVU3Hr1G105400.5 , HORVU3Hr1G105400.4
Wheat TraesCS3D02G478200 , TraesCS3B02G526600 , TraesCS3D02G478800 , TraesCS3B02G529700 , TraesCS3B02G571300 , TraesCS3A02G483000 , TraesCS3B02G529300 , TraesCS1A02G312700 , TraesCS1A02G312700 , TraesCS3B02G526000 , TraesCS1D02G312800 , TraesCS1D02G312800 , TraesCS3D02G478300 , TraesCS3B02G526600 , TraesCS3D02G478000 , TraesCS1B02G324300 , TraesCS1B02G324300 , TraesCS3D02G476500 , TraesCS3D02G476500 , TraesCS3B02G524700 , TraesCS3B02G529400 , TraesCS3A02G480200 , TraesCS3A02G483100 , TraesCS3B02G530500 , TraesCS3D02G475000 , TraesCS3B02G530600 , TraesCS3A02G481500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G035700 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA2 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
2 Sobic.010G069200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
3 Sobic.001G119000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.001G054400 expressed protein -
5 Sobic.007G171000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
6 Sobic.010G078600 - -
7 Sobic.004G195300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.004G147900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
9 Sobic.009G155200 ZOS5-08 - C2H2 zinc finger protein, expressed -
10 Sobic.010G036800 expressed protein -
11 Sobic.003G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
12 Sobic.001G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.003G429300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@NADPH quinone oxidoreductase, putative, expressed -
14 Sobic.002G359300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-07 - C2H2 zinc finger protein, expressed -
15 Sobic.004G278400 DUF581 domain containing protein, expressed -
16 Sobic.006G214600 - -
17 Sobic.002G202600 joka8, putative, expressed -
18 Sobic.006G228300 ethylene-responsive protein related, putative, expressed -
19 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
20 Sobic.002G195900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G423500 Sobic003G423500 Sobic003G035700 Sobic003G035700 Sobic003G423500--Sobic003G035700 Sobic010G069200 Sobic010G069200 Sobic003G423500--Sobic010G069200 Sobic001G119000 Sobic001G119000 Sobic003G423500--Sobic001G119000 Sobic001G054400 Sobic001G054400 Sobic003G423500--Sobic001G054400 Sobic007G171000 Sobic007G171000 Sobic003G423500--Sobic007G171000 Sobic010G078600 Sobic010G078600 Sobic003G423500--Sobic010G078600 Sobic004G195300 Sobic004G195300 Sobic003G423500--Sobic004G195300 Sobic004G147900 Sobic004G147900 Sobic003G423500--Sobic004G147900 Sobic009G155200 Sobic009G155200 Sobic003G423500--Sobic009G155200 Sobic003G035700--Sobic003G423500 Sobic003G035700--Sobic004G147900 Sobic010G200700 Sobic010G200700 Sobic003G035700--Sobic010G200700 Sobic003G035700--Sobic004G195300 Sobic004G297200 Sobic004G297200 Sobic003G035700--Sobic004G297200 Sobic003G035700--Sobic010G078600 Sobic001G290400 Sobic001G290400 Sobic003G035700--Sobic001G290400 Sobic003G012800 Sobic003G012800 Sobic003G035700--Sobic003G012800 Sobic001G482700 Sobic001G482700 Sobic003G035700--Sobic001G482700 Sobic006G224200 Sobic006G224200 Sobic010G069200--Sobic006G224200 Sobic006G121500 Sobic006G121500 Sobic010G069200--Sobic006G121500 Sobic010G069200--Sobic003G423500 Sobic010G069200--Sobic007G171000 Sobic004G050000 Sobic004G050000 Sobic010G069200--Sobic004G050000 Sobic003G322900 Sobic003G322900 Sobic010G069200--Sobic003G322900 Sobic004G307000 Sobic004G307000 Sobic010G069200--Sobic004G307000 Sobic002G055600 Sobic002G055600 Sobic010G069200--Sobic002G055600 Sobic007G137700 Sobic007G137700 Sobic010G069200--Sobic007G137700 Sobic001G119100 Sobic001G119100 Sobic001G119000--Sobic001G119100 Sobic005G091500 Sobic005G091500 Sobic001G119000--Sobic005G091500 Sobic002G183200 Sobic002G183200 Sobic001G119000--Sobic002G183200 Sobic002G245100 Sobic002G245100 Sobic001G119000--Sobic002G245100 Sobic001G252300 Sobic001G252300 Sobic001G119000--Sobic001G252300 Sobic001G119000--Sobic002G055600 Sobic004G189400 Sobic004G189400 Sobic001G119000--Sobic004G189400 Sobic004G166700 Sobic004G166700 Sobic001G119000--Sobic004G166700 Sobic001G389000 Sobic001G389000 Sobic001G119000--Sobic001G389000 Sobic001G054400--Sobic009G155200 Sobic001G054400--Sobic001G119000 Sobic001G054400--Sobic003G423500 Sobic001G054400--Sobic004G195300 Sobic009G177800 Sobic009G177800 Sobic001G054400--Sobic009G177800 Sobic001G054400--Sobic007G171000 Sobic002G359300 Sobic002G359300 Sobic001G054400--Sobic002G359300 Sobic001G054400--Sobic003G035700 Sobic001G054400--Sobic001G119100 Sobic007G171000--Sobic009G155200 Sobic002G195900 Sobic002G195900 Sobic007G171000--Sobic002G195900 Sobic003G429300 Sobic003G429300 Sobic007G171000--Sobic003G429300 Sobic007G171000--Sobic001G119000 Sobic007G171000--Sobic009G177800 Sobic007G171000--Sobic002G359300 Sobic002G046100 Sobic002G046100 Sobic007G171000--Sobic002G046100 Sobic008G111100 Sobic008G111100 Sobic007G171000--Sobic008G111100 Sobic007G171000--Sobic007G137700 Sobic006G026700 Sobic006G026700 Sobic010G078600--Sobic006G026700 Sobic010G036800 Sobic010G036800 Sobic010G078600--Sobic010G036800 Sobic010G078600--Sobic004G195300 Sobic006G089300 Sobic006G089300 Sobic010G078600--Sobic006G089300 Sobic010G078600--Sobic003G423500 Sobic002G036100 Sobic002G036100 Sobic010G078600--Sobic002G036100 Sobic003G158500 Sobic003G158500 Sobic010G078600--Sobic003G158500 Sobic007G151100 Sobic007G151100 Sobic010G078600--Sobic007G151100 Sobic010G078600--Sobic003G035700 Sobic004G195300--Sobic006G089300 Sobic002G202600 Sobic002G202600 Sobic004G195300--Sobic002G202600 Sobic004G195300--Sobic002G359300 Sobic004G195300--Sobic010G200700 Sobic004G195300--Sobic010G078600 Sobic004G195300--Sobic003G035700 Sobic004G195300--Sobic001G119000 Sobic009G066800 Sobic009G066800 Sobic004G195300--Sobic009G066800 Sobic004G195300--Sobic001G054400 Sobic007G057100 Sobic007G057100 Sobic004G147900--Sobic007G057100 Sobic004G147900--Sobic003G035700 Sobic004G147900--Sobic001G290400 Sobic004G147900--Sobic009G155200 Sobic004G147900--Sobic003G423500 Sobic004G051166 Sobic004G051166 Sobic004G147900--Sobic004G051166 Sobic004G147900--Sobic003G158500 Sobic001G513700 Sobic001G513700 Sobic004G147900--Sobic001G513700 Sobic004G147900--Sobic007G171000 Sobic009G155200--Sobic007G171000 Sobic009G155200--Sobic001G119000 Sobic009G155200--Sobic001G054400 Sobic009G155200--Sobic002G359300 Sobic009G155200--Sobic008G111100 Sobic009G155200--Sobic009G177800 Sobic005G103300 Sobic005G103300 Sobic009G155200--Sobic005G103300 Sobic009G036700 Sobic009G036700 Sobic009G155200--Sobic009G036700 Sobic001G040200 Sobic001G040200 Sobic009G155200--Sobic001G040200
Octagon: transcription factors


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