Gene annotation
Transcriptome id Sobic.010G036800.1
Synonym Sb10g003280
Functional annotation expressed protein
UniProt C5Z3Y4
Pfam -
Panther DB PTHR33120
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g05420.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G101100 expressed protein -
2 Sobic.009G069700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@Transcriptional repressor(PubMedID : 30367619)@OsIAA16 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
3 Sobic.001G247300 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
4 Sobic.003G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
5 Sobic.010G259300 transferase family protein, putative, expressed -
6 Sobic.006G240600 - -
7 Sobic.010G078600 - -
8 Sobic.003G092900 expressed protein -
9 Sobic.003G313100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.002G243000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
11 Sobic.006G101300 expressed protein -
12 Sobic.001G449100 E2F-related protein, putative, expressed -
13 Sobic.005G111400 lipase, putative, expressed -
14 Sobic.004G169300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain-containing protein, putative, expressed -
15 Sobic.004G161751 - -
16 Sobic.003G079200 - -
17 Sobic.001G267600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -
18 Sobic.003G050300 peroxidases (PubMedID : 28944535)@peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.001G538866 - -
20 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase


Gene co-expression network
sample Sobic010G036800 Sobic010G036800 Sobic006G101100 Sobic006G101100 Sobic010G036800--Sobic006G101100 Sobic009G069700 Sobic009G069700 Sobic010G036800--Sobic009G069700 Sobic001G247300 Sobic001G247300 Sobic010G036800--Sobic001G247300 Sobic003G158500 Sobic003G158500 Sobic010G036800--Sobic003G158500 Sobic010G259300 Sobic010G259300 Sobic010G036800--Sobic010G259300 Sobic006G240600 Sobic006G240600 Sobic010G036800--Sobic006G240600 Sobic010G078600 Sobic010G078600 Sobic010G036800--Sobic010G078600 Sobic003G092900 Sobic003G092900 Sobic010G036800--Sobic003G092900 Sobic003G313100 Sobic003G313100 Sobic010G036800--Sobic003G313100 Sobic009G192600 Sobic009G192600 Sobic006G101100--Sobic009G192600 Sobic006G101300 Sobic006G101300 Sobic006G101100--Sobic006G101300 Sobic008G066200 Sobic008G066200 Sobic006G101100--Sobic008G066200 Sobic001G259900 Sobic001G259900 Sobic006G101100--Sobic001G259900 Sobic006G101100--Sobic003G313100 Sobic010G082600 Sobic010G082600 Sobic006G101100--Sobic010G082600 Sobic002G012500 Sobic002G012500 Sobic006G101100--Sobic002G012500 Sobic001G259400 Sobic001G259400 Sobic006G101100--Sobic001G259400 Sobic003G142300 Sobic003G142300 Sobic006G101100--Sobic003G142300 Sobic009G069700--Sobic003G158500 Sobic008G139600 Sobic008G139600 Sobic009G069700--Sobic008G139600 Sobic009G069700--Sobic001G247300 Sobic004G169300 Sobic004G169300 Sobic009G069700--Sobic004G169300 Sobic003G360000 Sobic003G360000 Sobic009G069700--Sobic003G360000 Sobic009G069700--Sobic010G036800 Sobic003G264500 Sobic003G264500 Sobic009G069700--Sobic003G264500 Sobic001G407800 Sobic001G407800 Sobic009G069700--Sobic001G407800 Sobic007G151100 Sobic007G151100 Sobic009G069700--Sobic007G151100 Sobic005G196800 Sobic005G196800 Sobic001G247300--Sobic005G196800 Sobic003G043600 Sobic003G043600 Sobic001G247300--Sobic003G043600 Sobic001G247300--Sobic003G092900 Sobic004G237800 Sobic004G237800 Sobic001G247300--Sobic004G237800 Sobic009G184000 Sobic009G184000 Sobic001G247300--Sobic009G184000 Sobic006G183400 Sobic006G183400 Sobic001G247300--Sobic006G183400 Sobic002G338500 Sobic002G338500 Sobic001G247300--Sobic002G338500 Sobic007G074000 Sobic007G074000 Sobic001G247300--Sobic007G074000 Sobic003G382600 Sobic003G382600 Sobic001G247300--Sobic003G382600 Sobic001G040200 Sobic001G040200 Sobic003G158500--Sobic001G040200 Sobic002G140300 Sobic002G140300 Sobic003G158500--Sobic002G140300 Sobic002G245100 Sobic002G245100 Sobic003G158500--Sobic002G245100 Sobic003G158500--Sobic010G259300 Sobic003G158500--Sobic001G407800 Sobic002G356101 Sobic002G356101 Sobic003G158500--Sobic002G356101 Sobic003G158500--Sobic007G151100 Sobic003G430400 Sobic003G430400 Sobic003G158500--Sobic003G430400 Sobic001G538866 Sobic001G538866 Sobic003G158500--Sobic001G538866 Sobic003G093000 Sobic003G093000 Sobic010G259300--Sobic003G093000 Sobic002G189100 Sobic002G189100 Sobic010G259300--Sobic002G189100 Sobic010G259300--Sobic001G407800 Sobic006G054800 Sobic006G054800 Sobic010G259300--Sobic006G054800 Sobic010G259300--Sobic008G139600 Sobic002G220000 Sobic002G220000 Sobic010G259300--Sobic002G220000 Sobic010G259300--Sobic004G237800 Sobic010G259300--Sobic001G247300 Sobic003G043500 Sobic003G043500 Sobic010G259300--Sobic003G043500 Sobic009G145500 Sobic009G145500 Sobic006G240600--Sobic009G145500 Sobic002G243000 Sobic002G243000 Sobic006G240600--Sobic002G243000 Sobic003G073380 Sobic003G073380 Sobic006G240600--Sobic003G073380 Sobic004G161751 Sobic004G161751 Sobic006G240600--Sobic004G161751 Sobic006G240600--Sobic010G259300 Sobic001G401100 Sobic001G401100 Sobic006G240600--Sobic001G401100 Sobic009G145600 Sobic009G145600 Sobic006G240600--Sobic009G145600 Sobic006G154500 Sobic006G154500 Sobic006G240600--Sobic006G154500 Sobic006G240600--Sobic003G043600 Sobic006G026700 Sobic006G026700 Sobic010G078600--Sobic006G026700 Sobic010G078600--Sobic010G036800 Sobic004G195300 Sobic004G195300 Sobic010G078600--Sobic004G195300 Sobic006G089300 Sobic006G089300 Sobic010G078600--Sobic006G089300 Sobic003G423500 Sobic003G423500 Sobic010G078600--Sobic003G423500 Sobic002G036100 Sobic002G036100 Sobic010G078600--Sobic002G036100 Sobic010G078600--Sobic003G158500 Sobic010G078600--Sobic007G151100 Sobic003G035700 Sobic003G035700 Sobic010G078600--Sobic003G035700 Sobic003G092900--Sobic003G093000 Sobic004G222500 Sobic004G222500 Sobic003G092900--Sobic004G222500 Sobic003G092900--Sobic002G220000 Sobic003G092900--Sobic001G247300 Sobic003G092900--Sobic002G140300 Sobic003G092900--Sobic003G430400 Sobic009G247900 Sobic009G247900 Sobic003G092900--Sobic009G247900 Sobic001G267600 Sobic001G267600 Sobic003G092900--Sobic001G267600 Sobic003G092900--Sobic002G189100 Sobic003G079200 Sobic003G079200 Sobic003G313100--Sobic003G079200 Sobic003G313100--Sobic008G066200 Sobic003G313100--Sobic009G145600 Sobic008G066401 Sobic008G066401 Sobic003G313100--Sobic008G066401 Sobic006G008000 Sobic006G008000 Sobic003G313100--Sobic006G008000 Sobic003G313100--Sobic006G101100 Sobic003G313100--Sobic002G012500 Sobic009G145700 Sobic009G145700 Sobic003G313100--Sobic009G145700 Sobic008G022000 Sobic008G022000 Sobic003G313100--Sobic008G022000
Octagon: transcription factors


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