Gene annotation
Transcriptome id Sobic.006G224200.1
Synonym Sb06g029340
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)" (PubMedID : 27586543)
translation initiation factor SUI1, putative, expressed
UniProt C5YGJ3
Pfam PF01253
Panther DB PTHR10388 PTHR10388:SF12
NCBI CDD KOG1770; Translation initiation factor 1 (eIF-1/SUI1)
KEGG Orthology K03113; EIF1, translation initiation factor 1
Gene Ontology GO:0006413; translational initiation GO:0003743translation initiation factor activity


Orthologs (automatic annotation)
TAIR AT5G54760 : Translation initiation factor SUI1 family protein
RAP-DB (Rice) LOC_Os05g41900.2 : translation initiation factor SUI1, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU2Hr1G107100.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G069200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
2 Sobic.006G121500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytochrome P450, putative, expressed -
3 Sobic.006G214600 - -
4 Sobic.002G139300 AP2 domain containing protein, expressed -
5 Sobic.006G240600 - -
6 Sobic.010G211600 Up-reguralion under heat(PubMedID : 24916767)@gp176, putative, expressed -
7 Sobic.008G158100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
8 Sobic.008G027600 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.003G322900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.009G009600 expressed protein -
11 Sobic.001G449100 E2F-related protein, putative, expressed -
12 Sobic.007G215600 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
13 Sobic.003G275300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytidine/deoxycytidylate deaminase, putative, expressed K01489: cdd, cytidine deaminase
14 Sobic.004G148100 Cupin domain containing protein, expressed -
15 Sobic.006G218300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
16 Sobic.002G004900 transporter family protein, putative, expressed -
17 Sobic.004G064900 gp176, putative, expressed -
18 Sobic.004G189500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.001G304700 proline oxidase, mitochondrial precursor, putative, expressed K00318: PRODH, fadM, proline dehydrogenase
20 Sobic.003G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic006G224200 Sobic006G224200 Sobic010G069200 Sobic010G069200 Sobic006G224200--Sobic010G069200 Sobic006G121500 Sobic006G121500 Sobic006G224200--Sobic006G121500 Sobic006G214600 Sobic006G214600 Sobic006G224200--Sobic006G214600 Sobic002G139300 Sobic002G139300 Sobic006G224200--Sobic002G139300 Sobic006G240600 Sobic006G240600 Sobic006G224200--Sobic006G240600 Sobic010G211600 Sobic010G211600 Sobic006G224200--Sobic010G211600 Sobic008G158100 Sobic008G158100 Sobic006G224200--Sobic008G158100 Sobic008G027600 Sobic008G027600 Sobic006G224200--Sobic008G027600 Sobic003G322900 Sobic003G322900 Sobic006G224200--Sobic003G322900 Sobic010G069200--Sobic006G224200 Sobic010G069200--Sobic006G121500 Sobic003G423500 Sobic003G423500 Sobic010G069200--Sobic003G423500 Sobic007G171000 Sobic007G171000 Sobic010G069200--Sobic007G171000 Sobic004G050000 Sobic004G050000 Sobic010G069200--Sobic004G050000 Sobic010G069200--Sobic003G322900 Sobic004G307000 Sobic004G307000 Sobic010G069200--Sobic004G307000 Sobic002G055600 Sobic002G055600 Sobic010G069200--Sobic002G055600 Sobic007G137700 Sobic007G137700 Sobic010G069200--Sobic007G137700 Sobic001G401100 Sobic001G401100 Sobic006G121500--Sobic001G401100 Sobic006G121500--Sobic002G055600 Sobic004G148200 Sobic004G148200 Sobic006G121500--Sobic004G148200 Sobic002G367400 Sobic002G367400 Sobic006G121500--Sobic002G367400 Sobic002G055700 Sobic002G055700 Sobic006G121500--Sobic002G055700 Sobic006G121500--Sobic010G069200 Sobic004G189500 Sobic004G189500 Sobic006G121500--Sobic004G189500 Sobic006G121500--Sobic004G050000 Sobic006G121500--Sobic006G240600 Sobic003G364950 Sobic003G364950 Sobic006G214600--Sobic003G364950 Sobic010G043900 Sobic010G043900 Sobic006G214600--Sobic010G043900 Sobic002G422300 Sobic002G422300 Sobic006G214600--Sobic002G422300 Sobic004G278400 Sobic004G278400 Sobic006G214600--Sobic004G278400 Sobic006G190700 Sobic006G190700 Sobic006G214600--Sobic006G190700 Sobic001G054500 Sobic001G054500 Sobic006G214600--Sobic001G054500 Sobic005G108601 Sobic005G108601 Sobic006G214600--Sobic005G108601 Sobic004G045400 Sobic004G045400 Sobic006G214600--Sobic004G045400 Sobic006G227750 Sobic006G227750 Sobic006G214600--Sobic006G227750 Sobic009G196400 Sobic009G196400 Sobic002G139300--Sobic009G196400 Sobic002G139300--Sobic008G158100 Sobic004G240600 Sobic004G240600 Sobic002G139300--Sobic004G240600 Sobic003G280200 Sobic003G280200 Sobic002G139300--Sobic003G280200 Sobic001G444400 Sobic001G444400 Sobic002G139300--Sobic001G444400 Sobic001G333400 Sobic001G333400 Sobic002G139300--Sobic001G333400 Sobic002G139300--Sobic004G189500 Sobic010G052700 Sobic010G052700 Sobic002G139300--Sobic010G052700 Sobic002G139300--Sobic004G148200 Sobic009G145500 Sobic009G145500 Sobic006G240600--Sobic009G145500 Sobic002G243000 Sobic002G243000 Sobic006G240600--Sobic002G243000 Sobic003G073380 Sobic003G073380 Sobic006G240600--Sobic003G073380 Sobic004G161751 Sobic004G161751 Sobic006G240600--Sobic004G161751 Sobic010G259300 Sobic010G259300 Sobic006G240600--Sobic010G259300 Sobic006G240600--Sobic001G401100 Sobic009G145600 Sobic009G145600 Sobic006G240600--Sobic009G145600 Sobic006G154500 Sobic006G154500 Sobic006G240600--Sobic006G154500 Sobic003G043600 Sobic003G043600 Sobic006G240600--Sobic003G043600 Sobic002G004900 Sobic002G004900 Sobic010G211600--Sobic002G004900 Sobic010G211600--Sobic003G280200 Sobic010G211600--Sobic008G027600 Sobic010G211600--Sobic008G158100 Sobic008G172600 Sobic008G172600 Sobic010G211600--Sobic008G172600 Sobic005G177600 Sobic005G177600 Sobic010G211600--Sobic005G177600 Sobic003G417700 Sobic003G417700 Sobic010G211600--Sobic003G417700 Sobic001G318500 Sobic001G318500 Sobic010G211600--Sobic001G318500 Sobic010G211600--Sobic002G139300 Sobic008G158100--Sobic008G027600 Sobic008G158100--Sobic004G148200 Sobic008G158100--Sobic002G139300 Sobic008G158100--Sobic003G417700 Sobic001G187200 Sobic001G187200 Sobic008G158100--Sobic001G187200 Sobic005G011200 Sobic005G011200 Sobic008G158100--Sobic005G011200 Sobic006G268800 Sobic006G268800 Sobic008G158100--Sobic006G268800 Sobic002G369400 Sobic002G369400 Sobic008G158100--Sobic002G369400 Sobic008G158100--Sobic009G145500 Sobic006G158400 Sobic006G158400 Sobic008G027600--Sobic006G158400 Sobic008G027600--Sobic002G369400 Sobic008G027600--Sobic008G158100 Sobic008G027600--Sobic010G043900 Sobic008G027600--Sobic001G318500 Sobic001G114900 Sobic001G114900 Sobic008G027600--Sobic001G114900 Sobic003G007600 Sobic003G007600 Sobic008G027600--Sobic003G007600 Sobic008G027600--Sobic009G145500 Sobic008G027600--Sobic002G243000 Sobic002G263400 Sobic002G263400 Sobic003G322900--Sobic002G263400 Sobic004G189400 Sobic004G189400 Sobic003G322900--Sobic004G189400 Sobic002G183200 Sobic002G183200 Sobic003G322900--Sobic002G183200 Sobic004G148000 Sobic004G148000 Sobic003G322900--Sobic004G148000 Sobic003G382600 Sobic003G382600 Sobic003G322900--Sobic003G382600 Sobic005G091500 Sobic005G091500 Sobic003G322900--Sobic005G091500 Sobic002G140400 Sobic002G140400 Sobic003G322900--Sobic002G140400 Sobic007G155100 Sobic007G155100 Sobic003G322900--Sobic007G155100 Sobic003G307801 Sobic003G307801 Sobic003G322900--Sobic003G307801
Octagon: transcription factors


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