Gene annotation
Transcriptome id Sobic.001G304700.1,Sobic.001G304700.2
Synonym Sb01g029660
Functional annotation proline oxidase, mitochondrial precursor, putative, expressed
UniProt C5WSJ9 , A0A1B6QM18
Pfam PF01619
Panther DB PTHR13914 PTHR13914:SF0
NCBI CDD KOG0186; Proline oxidase
KEGG Orthology K00318; PRODH, fadM, proline dehydrogenase
Gene Ontology GO:0006562; proline catabolic process GO:0004657proline dehydrogenase activity


Orthologs (automatic annotation)
TAIR AT5G38710 : Methylenetetrahydrofolate reductase family protein
RAP-DB (Rice) LOC_Os10g40360.1 : proline oxidase, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a003284 , Zm00025a052013
Brachypodium KQJ97732
Barley HORVU1Hr1G053440.7 , HORVU1Hr1G053440.6 , HORVU1Hr1G053440.5 , HORVU1Hr1G053440.4 , HORVU1Hr1G053440.3 , HORVU1Hr1G053440.2 , HORVU1Hr1G053440.1
Wheat TraesCS1D02G212400 , TraesCS1B02G223300 , TraesCS1A02G209100 , TraesCS1A02G209100
Populus -


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cDNA sequences
Sobic.001G304700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G196800 membrane protein, putative, expressed -
2 Sobic.002G355100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@STE_PAK_Ste20_Slob_Wnk.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
3 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
4 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
5 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
6 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
7 Sobic.001G247300 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
8 Sobic.002G338500 sugar transporter 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
9 Sobic.003G043500 - -
10 Sobic.008G139600 lectin-like receptor kinase, putative, expressed -
11 Sobic.003G265200 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
12 Sobic.009G145500 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.009G168900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.004G161751 - -
15 Sobic.006G154500 GEM, putative, expressed -
16 Sobic.003G050300 peroxidases (PubMedID : 28944535)@peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.010G259300 transferase family protein, putative, expressed -
18 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
19 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
20 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G304700 Sobic001G304700 Sobic005G196800 Sobic005G196800 Sobic001G304700--Sobic005G196800 Sobic002G355100 Sobic002G355100 Sobic001G304700--Sobic002G355100 Sobic002G336600 Sobic002G336600 Sobic001G304700--Sobic002G336600 Sobic004G237800 Sobic004G237800 Sobic001G304700--Sobic004G237800 Sobic003G043600 Sobic003G043600 Sobic001G304700--Sobic003G043600 Sobic003G303100 Sobic003G303100 Sobic001G304700--Sobic003G303100 Sobic001G247300 Sobic001G247300 Sobic001G304700--Sobic001G247300 Sobic002G338500 Sobic002G338500 Sobic001G304700--Sobic002G338500 Sobic003G043500 Sobic003G043500 Sobic001G304700--Sobic003G043500 Sobic005G196800--Sobic001G247300 Sobic005G196800--Sobic004G237800 Sobic001G390300 Sobic001G390300 Sobic005G196800--Sobic001G390300 Sobic005G196800--Sobic002G338500 Sobic004G321300 Sobic004G321300 Sobic005G196800--Sobic004G321300 Sobic006G183400 Sobic006G183400 Sobic005G196800--Sobic006G183400 Sobic003G382600 Sobic003G382600 Sobic005G196800--Sobic003G382600 Sobic005G196800--Sobic003G043600 Sobic002G055700 Sobic002G055700 Sobic005G196800--Sobic002G055700 Sobic009G168900 Sobic009G168900 Sobic002G355100--Sobic009G168900 Sobic002G355100--Sobic001G304700 Sobic001G508466 Sobic001G508466 Sobic002G355100--Sobic001G508466 Sobic002G355100--Sobic002G336600 Sobic002G055600 Sobic002G055600 Sobic002G355100--Sobic002G055600 Sobic002G355100--Sobic005G196800 Sobic002G355100--Sobic004G237800 Sobic010G086200 Sobic010G086200 Sobic002G355100--Sobic010G086200 Sobic004G061200 Sobic004G061200 Sobic002G355100--Sobic004G061200 Sobic002G336600--Sobic004G237800 Sobic007G074000 Sobic007G074000 Sobic002G336600--Sobic007G074000 Sobic004G208700 Sobic004G208700 Sobic002G336600--Sobic004G208700 Sobic004G229800 Sobic004G229800 Sobic002G336600--Sobic004G229800 Sobic003G369100 Sobic003G369100 Sobic002G336600--Sobic003G369100 Sobic001G435000 Sobic001G435000 Sobic002G336600--Sobic001G435000 Sobic002G140400 Sobic002G140400 Sobic002G336600--Sobic002G140400 Sobic004G141200 Sobic004G141200 Sobic002G336600--Sobic004G141200 Sobic003G345100 Sobic003G345100 Sobic002G336600--Sobic003G345100 Sobic004G237800--Sobic007G074000 Sobic004G237800--Sobic004G321300 Sobic004G237800--Sobic002G336600 Sobic004G189400 Sobic004G189400 Sobic004G237800--Sobic004G189400 Sobic004G237800--Sobic002G055700 Sobic004G237800--Sobic002G140400 Sobic005G091500 Sobic005G091500 Sobic004G237800--Sobic005G091500 Sobic001G112200 Sobic001G112200 Sobic004G237800--Sobic001G112200 Sobic005G063100 Sobic005G063100 Sobic004G237800--Sobic005G063100 Sobic003G043600--Sobic002G338500 Sobic009G145500 Sobic009G145500 Sobic003G043600--Sobic009G145500 Sobic003G268600 Sobic003G268600 Sobic003G043600--Sobic003G268600 Sobic006G075400 Sobic006G075400 Sobic003G043600--Sobic006G075400 Sobic003G442100 Sobic003G442100 Sobic003G043600--Sobic003G442100 Sobic001G310600 Sobic001G310600 Sobic003G043600--Sobic001G310600 Sobic009G184000 Sobic009G184000 Sobic003G043600--Sobic009G184000 Sobic009G145700 Sobic009G145700 Sobic003G043600--Sobic009G145700 Sobic001G318700 Sobic001G318700 Sobic003G043600--Sobic001G318700 Sobic003G303100--Sobic002G055700 Sobic003G303100--Sobic001G318700 Sobic003G303100--Sobic004G189400 Sobic003G303100--Sobic003G382600 Sobic003G303100--Sobic004G237800 Sobic003G426400 Sobic003G426400 Sobic003G303100--Sobic003G426400 Sobic004G148200 Sobic004G148200 Sobic003G303100--Sobic004G148200 Sobic005G029200 Sobic005G029200 Sobic003G303100--Sobic005G029200 Sobic003G303100--Sobic005G063100 Sobic001G247300--Sobic005G196800 Sobic001G247300--Sobic003G043600 Sobic003G092900 Sobic003G092900 Sobic001G247300--Sobic003G092900 Sobic001G247300--Sobic004G237800 Sobic001G247300--Sobic009G184000 Sobic001G247300--Sobic006G183400 Sobic001G247300--Sobic002G338500 Sobic001G247300--Sobic007G074000 Sobic001G247300--Sobic003G382600 Sobic002G338500--Sobic003G043600 Sobic002G338500--Sobic003G382600 Sobic002G338500--Sobic002G055700 Sobic010G156500 Sobic010G156500 Sobic002G338500--Sobic010G156500 Sobic003G364300 Sobic003G364300 Sobic002G338500--Sobic003G364300 Sobic002G338500--Sobic009G145500 Sobic002G338500--Sobic009G145700 Sobic002G353900 Sobic002G353900 Sobic002G338500--Sobic002G353900 Sobic002G338500--Sobic005G196800 Sobic009G145600 Sobic009G145600 Sobic003G043500--Sobic009G145600 Sobic008G066401 Sobic008G066401 Sobic003G043500--Sobic008G066401 Sobic003G043500--Sobic009G145700 Sobic006G054800 Sobic006G054800 Sobic003G043500--Sobic006G054800 Sobic007G169700 Sobic007G169700 Sobic003G043500--Sobic007G169700 Sobic008G139600 Sobic008G139600 Sobic003G043500--Sobic008G139600 Sobic004G245700 Sobic004G245700 Sobic003G043500--Sobic004G245700 Sobic003G043500--Sobic001G112200 Sobic003G043500--Sobic009G184000
Octagon: transcription factors


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