Gene annotation
Transcriptome id Sobic.002G355100.1
Synonym Sb02g037670
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
STE_PAK_Ste20_Slob_Wnk.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt C5XCH5
Pfam PF00069
Panther DB PTHR13902 PTHR13902:SF44
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology K08867; WNK, WNK lysine deficient protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G55560 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os07g39520.1 : STE_PAK_Ste20_Slob_Wnk.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
MaizeGDB (Corn) Zm00025a048538
Brachypodium KQK15505
Barley HORVU2Hr1G036210.4 , HORVU2Hr1G036210.5 , HORVU2Hr1G036210.1 , HORVU2Hr1G036210.2 , HORVU2Hr1G036210.3
Wheat TraesCS2A02G190200 , TraesCS2D02G197600 , TraesCS2B02G216800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G168900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.001G304700 proline oxidase, mitochondrial precursor, putative, expressed K00318: PRODH, fadM, proline dehydrogenase
3 Sobic.001G508466 - -
4 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
5 Sobic.002G055600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
6 Sobic.005G196800 membrane protein, putative, expressed -
7 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
8 Sobic.010G086200 GRAM domain containing protein, expressed -
9 Sobic.004G061200 expressed protein -
10 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
11 Sobic.002G356101 - -
12 Sobic.001G247300 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
13 Sobic.002G245100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
14 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
15 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
16 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
17 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
19 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
20 Sobic.001G477600 zinc finger protein, putative, expressed -


Gene co-expression network
sample Sobic002G355100 Sobic002G355100 Sobic009G168900 Sobic009G168900 Sobic002G355100--Sobic009G168900 Sobic001G304700 Sobic001G304700 Sobic002G355100--Sobic001G304700 Sobic001G508466 Sobic001G508466 Sobic002G355100--Sobic001G508466 Sobic002G336600 Sobic002G336600 Sobic002G355100--Sobic002G336600 Sobic002G055600 Sobic002G055600 Sobic002G355100--Sobic002G055600 Sobic005G196800 Sobic005G196800 Sobic002G355100--Sobic005G196800 Sobic004G237800 Sobic004G237800 Sobic002G355100--Sobic004G237800 Sobic010G086200 Sobic010G086200 Sobic002G355100--Sobic010G086200 Sobic004G061200 Sobic004G061200 Sobic002G355100--Sobic004G061200 Sobic006G157500 Sobic006G157500 Sobic009G168900--Sobic006G157500 Sobic009G184000 Sobic009G184000 Sobic009G168900--Sobic009G184000 Sobic001G318700 Sobic001G318700 Sobic009G168900--Sobic001G318700 Sobic001G112200 Sobic001G112200 Sobic009G168900--Sobic001G112200 Sobic003G260300 Sobic003G260300 Sobic009G168900--Sobic003G260300 Sobic003G303100 Sobic003G303100 Sobic009G168900--Sobic003G303100 Sobic001G372100 Sobic001G372100 Sobic009G168900--Sobic001G372100 Sobic001G502400 Sobic001G502400 Sobic009G168900--Sobic001G502400 Sobic001G310600 Sobic001G310600 Sobic009G168900--Sobic001G310600 Sobic001G304700--Sobic005G196800 Sobic001G304700--Sobic002G355100 Sobic001G304700--Sobic002G336600 Sobic001G304700--Sobic004G237800 Sobic003G043600 Sobic003G043600 Sobic001G304700--Sobic003G043600 Sobic001G304700--Sobic003G303100 Sobic001G247300 Sobic001G247300 Sobic001G304700--Sobic001G247300 Sobic002G338500 Sobic002G338500 Sobic001G304700--Sobic002G338500 Sobic003G043500 Sobic003G043500 Sobic001G304700--Sobic003G043500 Sobic004G146000 Sobic004G146000 Sobic001G508466--Sobic004G146000 Sobic004G159400 Sobic004G159400 Sobic001G508466--Sobic004G159400 Sobic004G205100 Sobic004G205100 Sobic001G508466--Sobic004G205100 Sobic002G418400 Sobic002G418400 Sobic001G508466--Sobic002G418400 Sobic005G099000 Sobic005G099000 Sobic001G508466--Sobic005G099000 Sobic001G108200 Sobic001G108200 Sobic001G508466--Sobic001G108200 Sobic001G508466--Sobic002G355100 Sobic009G234100 Sobic009G234100 Sobic001G508466--Sobic009G234100 Sobic004G208700 Sobic004G208700 Sobic001G508466--Sobic004G208700 Sobic002G336600--Sobic004G237800 Sobic007G074000 Sobic007G074000 Sobic002G336600--Sobic007G074000 Sobic002G336600--Sobic004G208700 Sobic004G229800 Sobic004G229800 Sobic002G336600--Sobic004G229800 Sobic003G369100 Sobic003G369100 Sobic002G336600--Sobic003G369100 Sobic001G435000 Sobic001G435000 Sobic002G336600--Sobic001G435000 Sobic002G140400 Sobic002G140400 Sobic002G336600--Sobic002G140400 Sobic004G141200 Sobic004G141200 Sobic002G336600--Sobic004G141200 Sobic003G345100 Sobic003G345100 Sobic002G336600--Sobic003G345100 Sobic002G055600--Sobic004G237800 Sobic005G091500 Sobic005G091500 Sobic002G055600--Sobic005G091500 Sobic008G136400 Sobic008G136400 Sobic002G055600--Sobic008G136400 Sobic004G321300 Sobic004G321300 Sobic002G055600--Sobic004G321300 Sobic004G189400 Sobic004G189400 Sobic002G055600--Sobic004G189400 Sobic002G055700 Sobic002G055700 Sobic002G055600--Sobic002G055700 Sobic003G334600 Sobic003G334600 Sobic002G055600--Sobic003G334600 Sobic002G183200 Sobic002G183200 Sobic002G055600--Sobic002G183200 Sobic004G189500 Sobic004G189500 Sobic002G055600--Sobic004G189500 Sobic005G196800--Sobic001G247300 Sobic005G196800--Sobic004G237800 Sobic001G390300 Sobic001G390300 Sobic005G196800--Sobic001G390300 Sobic005G196800--Sobic002G338500 Sobic005G196800--Sobic004G321300 Sobic006G183400 Sobic006G183400 Sobic005G196800--Sobic006G183400 Sobic003G382600 Sobic003G382600 Sobic005G196800--Sobic003G382600 Sobic005G196800--Sobic003G043600 Sobic005G196800--Sobic002G055700 Sobic004G237800--Sobic007G074000 Sobic004G237800--Sobic004G321300 Sobic004G237800--Sobic002G336600 Sobic004G237800--Sobic004G189400 Sobic004G237800--Sobic002G055700 Sobic004G237800--Sobic002G140400 Sobic004G237800--Sobic005G091500 Sobic004G237800--Sobic001G112200 Sobic005G063100 Sobic005G063100 Sobic004G237800--Sobic005G063100 Sobic006G267200 Sobic006G267200 Sobic010G086200--Sobic006G267200 Sobic004G065500 Sobic004G065500 Sobic010G086200--Sobic004G065500 Sobic010G086200--Sobic004G321300 Sobic009G141800 Sobic009G141800 Sobic010G086200--Sobic009G141800 Sobic009G129000 Sobic009G129000 Sobic010G086200--Sobic009G129000 Sobic009G143400 Sobic009G143400 Sobic010G086200--Sobic009G143400 Sobic001G459800 Sobic001G459800 Sobic010G086200--Sobic001G459800 Sobic009G033700 Sobic009G033700 Sobic010G086200--Sobic009G033700 Sobic003G393900 Sobic003G393900 Sobic010G086200--Sobic003G393900 Sobic004G061200--Sobic004G321300 Sobic002G393000 Sobic002G393000 Sobic004G061200--Sobic002G393000 Sobic001G038900 Sobic001G038900 Sobic004G061200--Sobic001G038900 Sobic003G393700 Sobic003G393700 Sobic004G061200--Sobic003G393700 Sobic009G159400 Sobic009G159400 Sobic004G061200--Sobic009G159400 Sobic004G061200--Sobic010G086200 Sobic004G061200--Sobic008G136400 Sobic004G061200--Sobic009G143400 Sobic002G046100 Sobic002G046100 Sobic004G061200--Sobic002G046100
Octagon: transcription factors


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