Gene annotation
Transcriptome id Sobic.003G278000.1
Synonym
Functional annotation expressed protein
UniProt C5XIC0
Pfam PF06376
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g52060.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G054900 DUF538 domain containing protein, putative, expressed -
2 Sobic.010G117300 DUF538 domain containing protein, putative, expressed -
3 Sobic.001G184000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
4 Sobic.005G043900 protein kinase domain containing protein, expressed -
5 Sobic.001G196300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
6 Sobic.002G329100 TKL_IRAK_DUF26-ld.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
7 Sobic.002G089100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
8 Sobic.003G075500 mitochondrial carrier protein, putative, expressed -
9 Sobic.005G182500 jacalin-like lectin domain containing protein, expressed -
10 Sobic.009G038401 - -
11 Sobic.010G075900 - -
12 Sobic.002G233000 RING-H2 finger protein ATL5F, putative, expressed -
13 Sobic.003G273200 helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.002G210901 - -
15 Sobic.004G226400 expressed protein -
16 Sobic.003G111300 PIII1 - Proteinase inhibitor II family protein precursor, expressed -
17 Sobic.002G088900 DUF538 domain containing protein, putative, expressed -
18 Sobic.004G276100 expressed protein -
19 Sobic.010G176700 receptor-like protein kinase precursor, putative, expressed -
20 Sobic.006G140200 sialyltransferase family domain containing protein, expressed -


Gene co-expression network
sample Sobic003G278000 Sobic003G278000 Sobic006G054900 Sobic006G054900 Sobic003G278000--Sobic006G054900 Sobic010G117300 Sobic010G117300 Sobic003G278000--Sobic010G117300 Sobic001G184000 Sobic001G184000 Sobic003G278000--Sobic001G184000 Sobic005G043900 Sobic005G043900 Sobic003G278000--Sobic005G043900 Sobic001G196300 Sobic001G196300 Sobic003G278000--Sobic001G196300 Sobic002G329100 Sobic002G329100 Sobic003G278000--Sobic002G329100 Sobic002G089100 Sobic002G089100 Sobic003G278000--Sobic002G089100 Sobic003G075500 Sobic003G075500 Sobic003G278000--Sobic003G075500 Sobic005G182500 Sobic005G182500 Sobic003G278000--Sobic005G182500 Sobic001G100700 Sobic001G100700 Sobic006G054900--Sobic001G100700 Sobic004G181800 Sobic004G181800 Sobic006G054900--Sobic004G181800 Sobic010G176700 Sobic010G176700 Sobic006G054900--Sobic010G176700 Sobic010G117200 Sobic010G117200 Sobic006G054900--Sobic010G117200 Sobic006G054900--Sobic003G278000 Sobic006G054900--Sobic001G196300 Sobic006G054900--Sobic001G184000 Sobic005G213200 Sobic005G213200 Sobic006G054900--Sobic005G213200 Sobic006G054900--Sobic003G075500 Sobic010G117800 Sobic010G117800 Sobic010G117300--Sobic010G117800 Sobic010G117600 Sobic010G117600 Sobic010G117300--Sobic010G117600 Sobic005G216200 Sobic005G216200 Sobic010G117300--Sobic005G216200 Sobic010G117300--Sobic002G329100 Sobic007G078100 Sobic007G078100 Sobic010G117300--Sobic007G078100 Sobic002G126600 Sobic002G126600 Sobic010G117300--Sobic002G126600 Sobic006G199100 Sobic006G199100 Sobic010G117300--Sobic006G199100 Sobic009G043600 Sobic009G043600 Sobic010G117300--Sobic009G043600 Sobic010G117300--Sobic001G196300 Sobic009G003900 Sobic009G003900 Sobic001G184000--Sobic009G003900 Sobic001G184000--Sobic003G075500 Sobic001G184000--Sobic010G176700 Sobic004G277000 Sobic004G277000 Sobic001G184000--Sobic004G277000 Sobic002G249000 Sobic002G249000 Sobic001G184000--Sobic002G249000 Sobic001G010400 Sobic001G010400 Sobic001G184000--Sobic001G010400 Sobic010G224200 Sobic010G224200 Sobic001G184000--Sobic010G224200 Sobic005G117400 Sobic005G117400 Sobic001G184000--Sobic005G117400 Sobic006G264300 Sobic006G264300 Sobic001G184000--Sobic006G264300 Sobic003G203200 Sobic003G203200 Sobic005G043900--Sobic003G203200 Sobic006G246600 Sobic006G246600 Sobic005G043900--Sobic006G246600 Sobic005G043600 Sobic005G043600 Sobic005G043900--Sobic005G043600 Sobic008G048900 Sobic008G048900 Sobic005G043900--Sobic008G048900 Sobic005G043900--Sobic002G089100 Sobic002G088900 Sobic002G088900 Sobic005G043900--Sobic002G088900 Sobic006G091700 Sobic006G091700 Sobic005G043900--Sobic006G091700 Sobic008G074400 Sobic008G074400 Sobic005G043900--Sobic008G074400 Sobic001G316400 Sobic001G316400 Sobic005G043900--Sobic001G316400 Sobic003G167500 Sobic003G167500 Sobic001G196300--Sobic003G167500 Sobic002G242500 Sobic002G242500 Sobic001G196300--Sobic002G242500 Sobic001G196300--Sobic001G010400 Sobic002G153500 Sobic002G153500 Sobic001G196300--Sobic002G153500 Sobic009G111600 Sobic009G111600 Sobic001G196300--Sobic009G111600 Sobic002G196100 Sobic002G196100 Sobic001G196300--Sobic002G196100 Sobic001G196300--Sobic002G249000 Sobic004G284500 Sobic004G284500 Sobic001G196300--Sobic004G284500 Sobic009G241700 Sobic009G241700 Sobic001G196300--Sobic009G241700 Sobic004G276100 Sobic004G276100 Sobic002G329100--Sobic004G276100 Sobic002G329100--Sobic007G078100 Sobic002G329100--Sobic009G043600 Sobic003G333400 Sobic003G333400 Sobic002G329100--Sobic003G333400 Sobic006G106800 Sobic006G106800 Sobic002G329100--Sobic006G106800 Sobic002G329100--Sobic004G277000 Sobic004G272800 Sobic004G272800 Sobic002G329100--Sobic004G272800 Sobic002G233000 Sobic002G233000 Sobic002G329100--Sobic002G233000 Sobic002G155500 Sobic002G155500 Sobic002G329100--Sobic002G155500 Sobic002G013000 Sobic002G013000 Sobic002G089100--Sobic002G013000 Sobic004G008800 Sobic004G008800 Sobic002G089100--Sobic004G008800 Sobic002G089100--Sobic002G088900 Sobic002G089100--Sobic006G246600 Sobic003G204501 Sobic003G204501 Sobic002G089100--Sobic003G204501 Sobic002G089100--Sobic005G043900 Sobic002G089100--Sobic001G316400 Sobic002G089100--Sobic003G203200 Sobic003G188100 Sobic003G188100 Sobic002G089100--Sobic003G188100 Sobic002G264400 Sobic002G264400 Sobic003G075500--Sobic002G264400 Sobic003G075500--Sobic006G264300 Sobic003G075500--Sobic004G277000 Sobic010G072000 Sobic010G072000 Sobic003G075500--Sobic010G072000 Sobic003G075500--Sobic001G184000 Sobic003G075500--Sobic009G003900 Sobic001G329100 Sobic001G329100 Sobic003G075500--Sobic001G329100 Sobic003G075500--Sobic002G249000 Sobic002G199900 Sobic002G199900 Sobic003G075500--Sobic002G199900 Sobic008G191600 Sobic008G191600 Sobic005G182500--Sobic008G191600 Sobic005G038900 Sobic005G038900 Sobic005G182500--Sobic005G038900 Sobic002G312900 Sobic002G312900 Sobic005G182500--Sobic002G312900 Sobic004G144500 Sobic004G144500 Sobic005G182500--Sobic004G144500 Sobic009G230100 Sobic009G230100 Sobic005G182500--Sobic009G230100 Sobic003G362100 Sobic003G362100 Sobic005G182500--Sobic003G362100 Sobic008G032100 Sobic008G032100 Sobic005G182500--Sobic008G032100 Sobic004G111800 Sobic004G111800 Sobic005G182500--Sobic004G111800 Sobic005G182500--Sobic005G213200
Octagon: transcription factors


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