Gene annotation
Transcriptome id Sobic.002G329100.1
Synonym Sb02g035560, RLK4, CRK10
Functional annotation TKL_IRAK_DUF26-ld.3 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt C5XAR2
Pfam PF01657 PF07714
Panther DB PTHR27002 PTHR27002:SF104
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G23180 : cysteine-rich RLK (RECEPTOR-like protein kinase) 10
RAP-DB (Rice) LOC_Os07g35790.1 : TKL_IRAK_DUF26-ld.5 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a048302 , Zm00025a048301
Brachypodium -
Barley HORVU2Hr1G044680.9 , HORVU2Hr1G044680.6 , HORVU2Hr1G044680.7 , HORVU2Hr1G044680.4 , HORVU2Hr1G044680.5 , HORVU2Hr1G044680.2 , HORVU2Hr1G044680.3 , HORVU2Hr1G044680.1 , HORVU2Hr1G044680.10 , HORVU2Hr1G044680.11 , HORVU2Hr1G044680.12
Wheat TraesCSU02G136200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G276100 expressed protein -
2 Sobic.007G078100 UPF0041 domain containing protein, putative, expressed -
3 Sobic.009G043600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.003G333400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.006G106800 - -
6 Sobic.004G277000 purine permease, putative, expressed -
7 Sobic.004G272800 VHS and GAT domain containing protein, expressed -
8 Sobic.002G233000 RING-H2 finger protein ATL5F, putative, expressed -
9 Sobic.002G155500 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
10 Sobic.004G050000 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
11 Sobic.006G108400 14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
12 Sobic.001G247900 "Protein chitinase 2, putative, (Os)"(PubMedID : 27208977)@chitinase 2, putative, expressed -
13 Sobic.001G401300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PR10(PubMedID : 20078779)@accumulation during fungal development(PubMedID : 10356799)@pathogenesis-related Bet v I family protein, putative, expressed -
14 Sobic.009G082700 serine/threonine-protein kinase receptor precursor, putative, expressed -
15 Sobic.002G153500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
16 Sobic.006G199100 pathogenesis-related Bet v I family protein, putative, expressed -
17 Sobic.004G225500 bolA, putative, expressed K05527: BolA family transcriptional regulator, general stress-responsive regulator
18 Sobic.004G284500 ORM1, putative, expressed -
19 Sobic.009G254900 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
20 Sobic.001G466000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -


Gene co-expression network
sample Sobic002G329100 Sobic002G329100 Sobic004G276100 Sobic004G276100 Sobic002G329100--Sobic004G276100 Sobic007G078100 Sobic007G078100 Sobic002G329100--Sobic007G078100 Sobic009G043600 Sobic009G043600 Sobic002G329100--Sobic009G043600 Sobic003G333400 Sobic003G333400 Sobic002G329100--Sobic003G333400 Sobic006G106800 Sobic006G106800 Sobic002G329100--Sobic006G106800 Sobic004G277000 Sobic004G277000 Sobic002G329100--Sobic004G277000 Sobic004G272800 Sobic004G272800 Sobic002G329100--Sobic004G272800 Sobic002G233000 Sobic002G233000 Sobic002G329100--Sobic002G233000 Sobic002G155500 Sobic002G155500 Sobic002G329100--Sobic002G155500 Sobic008G179500 Sobic008G179500 Sobic004G276100--Sobic008G179500 Sobic004G276100--Sobic004G272800 Sobic004G276100--Sobic007G078100 Sobic009G111600 Sobic009G111600 Sobic004G276100--Sobic009G111600 Sobic004G276100--Sobic002G329100 Sobic004G050000 Sobic004G050000 Sobic004G276100--Sobic004G050000 Sobic006G108400 Sobic006G108400 Sobic004G276100--Sobic006G108400 Sobic004G276100--Sobic009G043600 Sobic004G284500 Sobic004G284500 Sobic004G276100--Sobic004G284500 Sobic007G078100--Sobic004G276100 Sobic002G257300 Sobic002G257300 Sobic007G078100--Sobic002G257300 Sobic007G161400 Sobic007G161400 Sobic007G078100--Sobic007G161400 Sobic010G154700 Sobic010G154700 Sobic007G078100--Sobic010G154700 Sobic007G078100--Sobic004G272800 Sobic004G051700 Sobic004G051700 Sobic007G078100--Sobic004G051700 Sobic005G188100 Sobic005G188100 Sobic007G078100--Sobic005G188100 Sobic001G132100 Sobic001G132100 Sobic007G078100--Sobic001G132100 Sobic001G048832 Sobic001G048832 Sobic007G078100--Sobic001G048832 Sobic009G043600--Sobic004G050000 Sobic001G066000 Sobic001G066000 Sobic009G043600--Sobic001G066000 Sobic009G043600--Sobic004G277000 Sobic006G121500 Sobic006G121500 Sobic009G043600--Sobic006G121500 Sobic006G199100 Sobic006G199100 Sobic009G043600--Sobic006G199100 Sobic009G043600--Sobic006G108400 Sobic009G043600--Sobic004G276100 Sobic002G267500 Sobic002G267500 Sobic009G043600--Sobic002G267500 Sobic001G400700 Sobic001G400700 Sobic009G043600--Sobic001G400700 Sobic007G195100 Sobic007G195100 Sobic003G333400--Sobic007G195100 Sobic009G146100 Sobic009G146100 Sobic003G333400--Sobic009G146100 Sobic002G180600 Sobic002G180600 Sobic003G333400--Sobic002G180600 Sobic003G333400--Sobic008G179500 Sobic003G333400--Sobic004G276100 Sobic003G333400--Sobic004G277000 Sobic002G249000 Sobic002G249000 Sobic003G333400--Sobic002G249000 Sobic003G333400--Sobic004G050000 Sobic003G253000 Sobic003G253000 Sobic003G333400--Sobic003G253000 Sobic005G092900 Sobic005G092900 Sobic006G106800--Sobic005G092900 Sobic009G077800 Sobic009G077800 Sobic006G106800--Sobic009G077800 Sobic002G353900 Sobic002G353900 Sobic006G106800--Sobic002G353900 Sobic006G106800--Sobic001G400700 Sobic009G143400 Sobic009G143400 Sobic006G106800--Sobic009G143400 Sobic009G139400 Sobic009G139400 Sobic006G106800--Sobic009G139400 Sobic004G101300 Sobic004G101300 Sobic006G106800--Sobic004G101300 Sobic003G393700 Sobic003G393700 Sobic006G106800--Sobic003G393700 Sobic006G106800--Sobic004G050000 Sobic004G277000--Sobic004G050000 Sobic004G277000--Sobic009G043600 Sobic004G277000--Sobic002G249000 Sobic009G003900 Sobic009G003900 Sobic004G277000--Sobic009G003900 Sobic004G277000--Sobic002G267500 Sobic006G173900 Sobic006G173900 Sobic004G277000--Sobic006G173900 Sobic004G277000--Sobic004G276100 Sobic009G177800 Sobic009G177800 Sobic004G277000--Sobic009G177800 Sobic002G264400 Sobic002G264400 Sobic004G277000--Sobic002G264400 Sobic004G272800--Sobic002G267500 Sobic001G281400 Sobic001G281400 Sobic004G272800--Sobic001G281400 Sobic004G272800--Sobic003G253000 Sobic004G272800--Sobic001G048832 Sobic002G190900 Sobic002G190900 Sobic004G272800--Sobic002G190900 Sobic002G345300 Sobic002G345300 Sobic004G272800--Sobic002G345300 Sobic002G046100 Sobic002G046100 Sobic004G272800--Sobic002G046100 Sobic010G041600 Sobic010G041600 Sobic004G272800--Sobic010G041600 Sobic004G272800--Sobic005G188100 Sobic001G340500 Sobic001G340500 Sobic002G233000--Sobic001G340500 Sobic008G189300 Sobic008G189300 Sobic002G233000--Sobic008G189300 Sobic002G233000--Sobic006G108400 Sobic002G233000--Sobic004G272800 Sobic004G225500 Sobic004G225500 Sobic002G233000--Sobic004G225500 Sobic009G008900 Sobic009G008900 Sobic002G233000--Sobic009G008900 Sobic003G350300 Sobic003G350300 Sobic002G233000--Sobic003G350300 Sobic002G081600 Sobic002G081600 Sobic002G233000--Sobic002G081600 Sobic006G141500 Sobic006G141500 Sobic002G233000--Sobic006G141500 Sobic002G155500--Sobic004G225500 Sobic010G121300 Sobic010G121300 Sobic002G155500--Sobic010G121300 Sobic004G351500 Sobic004G351500 Sobic002G155500--Sobic004G351500 Sobic002G155500--Sobic007G078100 Sobic002G155500--Sobic004G272800 Sobic002G155500--Sobic001G048832 Sobic002G155500--Sobic004G276100 Sobic002G153500 Sobic002G153500 Sobic002G155500--Sobic002G153500 Sobic002G233100 Sobic002G233100 Sobic002G155500--Sobic002G233100
Octagon: transcription factors


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